RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
RNF43-206ENST00000582293 SHROOM2Q13796 1616 aa27.51■■□□□ 1.99
RNF43-206ENST00000582293 KIAA0586Q9BVV6 1533 aa27.46■■□□□ 1.99
RNF43-206ENST00000582293 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
RNF43-206ENST00000582293 ERCC6L2Q5T890 1561 aa27.44■■□□□ 1.98
RNF43-206ENST00000582293 ARAP1Q96P48 1450 aa27.4■■□□□ 1.98
RNF43-206ENST00000582293 JPH4Q96JJ6 628 aa27.38■■□□□ 1.97
RNF43-206ENST00000582293 IQGAP2Q13576 1575 aa27.35■■□□□ 1.97
RNF43-206ENST00000582293 PRG4Q92954 1404 aaPredicted RBP27.33■■□□□ 1.96
RNF43-206ENST00000582293 KIF21BO75037 1637 aa27.32■■□□□ 1.96
RNF43-206ENST00000582293 CTTNBP2Q8WZ74 1663 aa27.31■■□□□ 1.96
RNF43-206ENST00000582293 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
RNF43-206ENST00000582293 UGGT2Q9NYU1 1516 aa27.22■■□□□ 1.95
RNF43-206ENST00000582293 DISP1Q96F81 1524 aa27.2■■□□□ 1.94
RNF43-206ENST00000582293 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
RNF43-206ENST00000582293 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
RNF43-206ENST00000582293 EHMT2Q96KQ7 1210 aa27.09■■□□□ 1.93
RNF43-206ENST00000582293 CARMIL2Q6F5E8 1435 aa27.08■■□□□ 1.93
RNF43-206ENST00000582293 TNIKQ9UKE5 1360 aa27.04■■□□□ 1.92
RNF43-206ENST00000582293 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
RNF43-206ENST00000582293 PTPRGP23470 1445 aa26.99■■□□□ 1.91
RNF43-206ENST00000582293 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
RNF43-206ENST00000582293 ADCY10Q96PN6 1610 aa26.95■■□□□ 1.91
RNF43-206ENST00000582293 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
RNF43-206ENST00000582293 RANGAP1P46060 587 aaPredicted RBP26.9■■□□□ 1.9
RNF43-206ENST00000582293 P3H3Q8IVL6 736 aa26.89■■□□□ 1.9
RNF43-206ENST00000582293 EFCAB5A4FU69 1503 aa26.86■■□□□ 1.89
RNF43-206ENST00000582293 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
RNF43-206ENST00000582293 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
RNF43-206ENST00000582293 FHOD3Q2V2M9 1422 aa26.83■■□□□ 1.89
RNF43-206ENST00000582293 PLB1Q6P1J6 1458 aa26.83■■□□□ 1.89
RNF43-206ENST00000582293 ABCC2Q92887 1545 aa26.82■■□□□ 1.88
RNF43-206ENST00000582293 ABCA8O94911 1581 aa26.82■■□□□ 1.88
RNF43-206ENST00000582293 ARHGAP35Q9NRY4 1499 aa26.81■■□□□ 1.88
RNF43-206ENST00000582293 LOC105371045A0A1W2PR82 267 aa26.75■■□□□ 1.87
RNF43-206ENST00000582293 KDM5BQ9UGL1 1544 aa26.72■■□□□ 1.87
RNF43-206ENST00000582293 MAPKBP1O60336 1514 aa26.7■■□□□ 1.87
RNF43-206ENST00000582293 ZCCHC11Q5TAX3 1644 aaKnown RBP26.68■■□□□ 1.86
RNF43-206ENST00000582293 RAPGEF6Q8TEU7 1601 aa26.67■■□□□ 1.86
RNF43-206ENST00000582293 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
RNF43-206ENST00000582293 CLIP1P30622 1438 aa26.65■■□□□ 1.86
RNF43-206ENST00000582293 NUP153P49790 1475 aaKnown RBP26.61■■□□□ 1.85
RNF43-206ENST00000582293 CEP162Q5TB80 1403 aa26.6■■□□□ 1.85
RNF43-206ENST00000582293 ASXL2Q76L83 1435 aa26.58■■□□□ 1.85
RNF43-206ENST00000582293 ATP10BO94823 1461 aa26.58■■□□□ 1.85
RNF43-206ENST00000582293 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
RNF43-206ENST00000582293 KIF13AQ9H1H9 1805 aa26.57■■□□□ 1.84
RNF43-206ENST00000582293 FMN1Q68DA7 1419 aa26.56■■□□□ 1.84
RNF43-206ENST00000582293 ABCC10Q5T3U5 1492 aa26.55■■□□□ 1.84
RNF43-206ENST00000582293 DIP2BQ9P265 1576 aa26.55■■□□□ 1.84
RNF43-206ENST00000582293 ARID3CA6NKF2 412 aa26.53■■□□□ 1.84
RNF43-206ENST00000582293 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
RNF43-206ENST00000582293 WDR7Q9Y4E6 1490 aa26.47■■□□□ 1.83
RNF43-206ENST00000582293 HECW1Q76N89 1606 aa26.46■■□□□ 1.83
RNF43-206ENST00000582293 LRRIQ1Q96JM4 1722 aa26.45■■□□□ 1.83
RNF43-206ENST00000582293 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
RNF43-206ENST00000582293 CDK13Q14004 1512 aaKnown RBP26.44■■□□□ 1.82
RNF43-206ENST00000582293 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
RNF43-206ENST00000582293 FAM69CQ0P6D2 419 aa26.43■■□□□ 1.82
RNF43-206ENST00000582293 GLI2P10070 1586 aa26.42■■□□□ 1.82
RNF43-206ENST00000582293 FYCO1Q9BQS8 1478 aa26.37■■□□□ 1.81
RNF43-206ENST00000582293 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
RNF43-206ENST00000582293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
RNF43-206ENST00000582293 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
RNF43-206ENST00000582293 MAP3K4Q9Y6R4 1608 aa26.32■■□□□ 1.8
RNF43-206ENST00000582293 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
RNF43-206ENST00000582293 PPRC1Q5VV67 1664 aaKnown RBP26.31■■□□□ 1.8
RNF43-206ENST00000582293 CCDC18Q5T9S5 1454 aa26.27■■□□□ 1.8
RNF43-206ENST00000582293 TSPOAP1O95153 1857 aa26.27■■□□□ 1.8
RNF43-206ENST00000582293 VPS8Q8N3P4 1428 aa26.26■■□□□ 1.79
RNF43-206ENST00000582293 PLEKHD1A6NEE1 506 aa26.26■■□□□ 1.79
RNF43-206ENST00000582293 ABCA9Q8IUA7 1624 aa26.25■■□□□ 1.79
RNF43-206ENST00000582293 MAGI3Q5TCQ9 1506 aa26.24■■□□□ 1.79
RNF43-206ENST00000582293 CFAP43Q8NDM7 1665 aa26.24■■□□□ 1.79
RNF43-206ENST00000582293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.19■■□□□ 1.78
RNF43-206ENST00000582293 TROQ12816 1431 aaPredicted RBP26.19■■□□□ 1.78
RNF43-206ENST00000582293 CD109Q6YHK3 1445 aa26.18■■□□□ 1.78
RNF43-206ENST00000582293 KIF14Q15058 1648 aa26.17■■□□□ 1.78
RNF43-206ENST00000582293 TTC37Q6PGP7 1564 aa26.16■■□□□ 1.78
RNF43-206ENST00000582293 CDK11AQ9UQ88 783 aaPredicted RBP26.14■■□□□ 1.78
RNF43-206ENST00000582293 TEX14Q8IWB6 1497 aa26.09■■□□□ 1.77
RNF43-206ENST00000582293 TIAM1Q13009 1591 aa26.08■■□□□ 1.77
RNF43-206ENST00000582293 COL17A1Q9UMD9 1497 aaPredicted RBP26.05■■□□□ 1.76
RNF43-206ENST00000582293 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
RNF43-206ENST00000582293 KDM6BO15054 1643 aa26.02■■□□□ 1.76
RNF43-206ENST00000582293 EHBP1L1Q8N3D4 1523 aa26■■□□□ 1.75
RNF43-206ENST00000582293 PLCH2O75038 1416 aa26■■□□□ 1.75
RNF43-206ENST00000582293 MTUS2Q5JR59 1369 aa25.99■■□□□ 1.75
RNF43-206ENST00000582293 MYO5CQ9NQX4 1742 aa25.99■■□□□ 1.75
RNF43-206ENST00000582293 NEO1Q92859 1461 aa25.97■■□□□ 1.75
RNF43-206ENST00000582293 ARAP3Q8WWN8 1544 aa25.96■■□□□ 1.75
RNF43-206ENST00000582293 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
RNF43-206ENST00000582293 CDC42BPBQ9Y5S2 1711 aa25.94■■□□□ 1.74
RNF43-206ENST00000582293 FANCAO15360 1455 aa25.94■■□□□ 1.74
RNF43-206ENST00000582293 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
RNF43-206ENST00000582293 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
RNF43-206ENST00000582293 PREX2Q70Z35 1606 aa25.93■■□□□ 1.74
RNF43-206ENST00000582293 GPATCH8Q9UKJ3 1502 aaKnown RBP25.9■■□□□ 1.74
RNF43-206ENST00000582293 PHLDB1Q86UU1 1377 aa25.9■■□□□ 1.74
RNF43-206ENST00000582293 CFAP74Q9C0B2 1584 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 395.7 ms