RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 JPH4Q96JJ6 628 aa32.99■■■□□ 2.87
TOP3A-213ENST00000582230 ARHGEF11O15085 1522 aa32.93■■■□□ 2.86
TOP3A-213ENST00000582230 SHROOM2Q13796 1616 aa32.92■■■□□ 2.86
TOP3A-213ENST00000582230 IQGAP2Q13576 1575 aa32.89■■■□□ 2.86
TOP3A-213ENST00000582230 GOLGA3Q08378 1498 aa32.86■■■□□ 2.85
TOP3A-213ENST00000582230 RIMBP3CA6NJZ7 1639 aa32.86■■■□□ 2.85
TOP3A-213ENST00000582230 RIMBP3BA6NNM3 1639 aa32.86■■■□□ 2.85
TOP3A-213ENST00000582230 RIMBP3Q9UFD9 1639 aa32.86■■■□□ 2.85
TOP3A-213ENST00000582230 PRG4Q92954 1404 aaPredicted RBP32.85■■■□□ 2.85
TOP3A-213ENST00000582230 CTTNBP2Q8WZ74 1663 aa32.82■■■□□ 2.84
TOP3A-213ENST00000582230 UBTFP17480 764 aaKnown RBP32.79■■■□□ 2.84
TOP3A-213ENST00000582230 EHMT2Q96KQ7 1210 aa32.77■■■□□ 2.84
TOP3A-213ENST00000582230 UGGT2Q9NYU1 1516 aa32.76■■■□□ 2.83
TOP3A-213ENST00000582230 CARMIL2Q6F5E8 1435 aa32.74■■■□□ 2.83
TOP3A-213ENST00000582230 ERCC6L2Q5T890 1561 aa32.74■■■□□ 2.83
TOP3A-213ENST00000582230 ARAP1Q96P48 1450 aa32.69■■■□□ 2.82
TOP3A-213ENST00000582230 CYB5RLQ6IPT4 315 aa32.67■■■□□ 2.82
TOP3A-213ENST00000582230 DISP1Q96F81 1524 aa32.64■■■□□ 2.82
TOP3A-213ENST00000582230 TNIKQ9UKE5 1360 aa32.58■■■□□ 2.81
TOP3A-213ENST00000582230 KIAA0556O60303 1618 aa32.56■■■□□ 2.8
TOP3A-213ENST00000582230 PTPRGP23470 1445 aa32.54■■■□□ 2.8
TOP3A-213ENST00000582230 RANGAP1P46060 587 aaPredicted RBP32.53■■■□□ 2.8
TOP3A-213ENST00000582230 SAMD9Q5K651 1589 aa32.47■■■□□ 2.79
TOP3A-213ENST00000582230 LOC105371045A0A1W2PR82 267 aa32.46■■■□□ 2.79
TOP3A-213ENST00000582230 EFCAB5A4FU69 1503 aa32.45■■■□□ 2.78
TOP3A-213ENST00000582230 P3H3Q8IVL6 736 aa32.44■■■□□ 2.78
TOP3A-213ENST00000582230 TTBK1Q5TCY1 1321 aaPredicted RBP32.44■■■□□ 2.78
TOP3A-213ENST00000582230 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
TOP3A-213ENST00000582230 FHOD3Q2V2M9 1422 aa32.32■■■□□ 2.76
TOP3A-213ENST00000582230 UACAQ9BZF9 1416 aa32.32■■■□□ 2.76
TOP3A-213ENST00000582230 CLIP1P30622 1438 aa32.29■■■□□ 2.76
TOP3A-213ENST00000582230 UHRF1BP1LA0JNW5 1464 aa32.27■■■□□ 2.76
TOP3A-213ENST00000582230 PLB1Q6P1J6 1458 aa32.23■■■□□ 2.75
TOP3A-213ENST00000582230 ADCY10Q96PN6 1610 aa32.23■■■□□ 2.75
TOP3A-213ENST00000582230 NPM1P06748 294 aaKnown RBP eCLIP32.23■■■□□ 2.75
TOP3A-213ENST00000582230 CEP162Q5TB80 1403 aa32.23■■■□□ 2.75
TOP3A-213ENST00000582230 ABCC2Q92887 1545 aa32.22■■■□□ 2.75
TOP3A-213ENST00000582230 ABCA8O94911 1581 aa32.19■■■□□ 2.74
TOP3A-213ENST00000582230 FMN1Q68DA7 1419 aa32.18■■■□□ 2.74
TOP3A-213ENST00000582230 KDM5BQ9UGL1 1544 aa32.1■■■□□ 2.73
TOP3A-213ENST00000582230 RAPGEF6Q8TEU7 1601 aa32.08■■■□□ 2.73
TOP3A-213ENST00000582230 MAPKBP1O60336 1514 aa32■■■□□ 2.71
TOP3A-213ENST00000582230 NUP153P49790 1475 aaKnown RBP32■■■□□ 2.71
TOP3A-213ENST00000582230 ATP10BO94823 1461 aa31.97■■■□□ 2.71
TOP3A-213ENST00000582230 ZCCHC11Q5TAX3 1644 aaKnown RBP31.96■■■□□ 2.71
TOP3A-213ENST00000582230 CASKIN1Q8WXD9 1431 aa31.95■■■□□ 2.71
TOP3A-213ENST00000582230 ATP1B4Q9UN42 357 aaPredicted RBP31.95■■■□□ 2.71
TOP3A-213ENST00000582230 ARID3CA6NKF2 412 aa31.94■■■□□ 2.7
TOP3A-213ENST00000582230 ASXL2Q76L83 1435 aa31.92■■■□□ 2.7
TOP3A-213ENST00000582230 HECW1Q76N89 1606 aa31.92■■■□□ 2.7
TOP3A-213ENST00000582230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.91■■■□□ 2.7
TOP3A-213ENST00000582230 HNRNPUL2Q1KMD3 747 aaKnown RBP31.91■■■□□ 2.7
TOP3A-213ENST00000582230 TRHP20396 242 aaPredicted RBP31.88■■■□□ 2.69
TOP3A-213ENST00000582230 FYCO1Q9BQS8 1478 aa31.88■■■□□ 2.69
TOP3A-213ENST00000582230 PCF11O94913 1555 aaKnown RBP31.86■■■□□ 2.69
TOP3A-213ENST00000582230 EPRSP07814 1512 aaKnown RBP31.85■■■□□ 2.69
TOP3A-213ENST00000582230 ABCC10Q5T3U5 1492 aa31.83■■■□□ 2.69
TOP3A-213ENST00000582230 WDR7Q9Y4E6 1490 aa31.83■■■□□ 2.69
TOP3A-213ENST00000582230 VPS8Q8N3P4 1428 aa31.83■■■□□ 2.69
TOP3A-213ENST00000582230 PLEKHD1A6NEE1 506 aa31.79■■■□□ 2.68
TOP3A-213ENST00000582230 CCDC18Q5T9S5 1454 aa31.78■■■□□ 2.68
TOP3A-213ENST00000582230 CDK11AQ9UQ88 783 aaPredicted RBP31.78■■■□□ 2.68
TOP3A-213ENST00000582230 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
TOP3A-213ENST00000582230 FAM69CQ0P6D2 419 aa31.77■■■□□ 2.68
TOP3A-213ENST00000582230 DIP2BQ9P265 1576 aa31.73■■■□□ 2.67
TOP3A-213ENST00000582230 KCNH8Q96L42 1107 aa31.71■■■□□ 2.67
TOP3A-213ENST00000582230 GLI2P10070 1586 aa31.68■■■□□ 2.66
TOP3A-213ENST00000582230 LRRIQ1Q96JM4 1722 aa31.66■■■□□ 2.66
TOP3A-213ENST00000582230 KIF13AQ9H1H9 1805 aa31.62■■■□□ 2.65
TOP3A-213ENST00000582230 TROQ12816 1431 aaPredicted RBP31.6■■■□□ 2.65
TOP3A-213ENST00000582230 APLP2Q06481 763 aa31.54■■■□□ 2.64
TOP3A-213ENST00000582230 MAP3K1Q13233 1512 aa31.53■■■□□ 2.64
TOP3A-213ENST00000582230 CD109Q6YHK3 1445 aa31.51■■■□□ 2.64
TOP3A-213ENST00000582230 MTUS2Q5JR59 1369 aa31.51■■■□□ 2.63
TOP3A-213ENST00000582230 MAGI3Q5TCQ9 1506 aa31.49■■■□□ 2.63
TOP3A-213ENST00000582230 ABCA9Q8IUA7 1624 aa31.49■■■□□ 2.63
TOP3A-213ENST00000582230 MAP3K4Q9Y6R4 1608 aa31.49■■■□□ 2.63
TOP3A-213ENST00000582230 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
TOP3A-213ENST00000582230 CFAP43Q8NDM7 1665 aa31.48■■■□□ 2.63
TOP3A-213ENST00000582230 KIF14Q15058 1648 aa31.46■■■□□ 2.63
TOP3A-213ENST00000582230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.45■■■□□ 2.63
TOP3A-213ENST00000582230 EHBP1L1Q8N3D4 1523 aa31.42■■■□□ 2.62
TOP3A-213ENST00000582230 TEX14Q8IWB6 1497 aa31.4■■■□□ 2.62
TOP3A-213ENST00000582230 LRRC9Q6ZRR7 1453 aa31.4■■■□□ 2.62
TOP3A-213ENST00000582230 TTC37Q6PGP7 1564 aa31.37■■■□□ 2.61
TOP3A-213ENST00000582230 TSPOAP1O95153 1857 aa31.35■■■□□ 2.61
TOP3A-213ENST00000582230 KANK4Q5T7N3 995 aaPredicted RBP31.35■■■□□ 2.61
TOP3A-213ENST00000582230 PLCH2O75038 1416 aa31.33■■■□□ 2.61
TOP3A-213ENST00000582230 PPRC1Q5VV67 1664 aaKnown RBP31.33■■■□□ 2.61
TOP3A-213ENST00000582230 PHLDB1Q86UU1 1377 aa31.29■■■□□ 2.6
TOP3A-213ENST00000582230 ARAP3Q8WWN8 1544 aa31.27■■■□□ 2.6
TOP3A-213ENST00000582230 CCNB3Q8WWL7 1395 aa31.26■■■□□ 2.59
TOP3A-213ENST00000582230 NEO1Q92859 1461 aa31.26■■■□□ 2.59
TOP3A-213ENST00000582230 EFCAB2Q5VUJ9 269 aa31.25■■■□□ 2.59
TOP3A-213ENST00000582230 SUPT6HQ7KZ85 1726 aaKnown RBP31.24■■■□□ 2.59
TOP3A-213ENST00000582230 FANCAO15360 1455 aa31.24■■■□□ 2.59
TOP3A-213ENST00000582230 NCOA2Q15596 1464 aa31.24■■■□□ 2.59
TOP3A-213ENST00000582230 MYO5CQ9NQX4 1742 aa31.24■■■□□ 2.59
TOP3A-213ENST00000582230 GPATCH8Q9UKJ3 1502 aaKnown RBP31.22■■■□□ 2.59
TOP3A-213ENST00000582230 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms