RNA–Protein interactions for RNA: ENST00000582050.1

EIF4A1-222, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-222	ENST00000582050	LOC105371045	A0A1W2PR82	267 aa		29.13	■■■□□ 2.25
EIF4A1-222	ENST00000582050	KIAA0586	Q9BVV6	1533 aa		29.13	■■■□□ 2.25
EIF4A1-222	ENST00000582050	CTTNBP2	Q8WZ74	1663 aa		29.11	■■■□□ 2.25
EIF4A1-222	ENST00000582050	TNIK	Q9UKE5	1360 aa		29.08	■■■□□ 2.25
EIF4A1-222	ENST00000582050	CLASP1	Q7Z460	1538 aa		29.05	■■■□□ 2.24
EIF4A1-222	ENST00000582050	IQGAP2	Q13576	1575 aa		29.04	■■■□□ 2.24
EIF4A1-222	ENST00000582050	JPH4	Q96JJ6	628 aa		28.96	■■■□□ 2.23
EIF4A1-222	ENST00000582050	UGGT2	Q9NYU1	1516 aa		28.92	■■■□□ 2.22
EIF4A1-222	ENST00000582050	SHROOM2	Q13796	1616 aa		28.91	■■■□□ 2.22
EIF4A1-222	ENST00000582050	CARMIL2	Q6F5E8	1435 aa		28.82	■■■□□ 2.2
EIF4A1-222	ENST00000582050	EFCAB5	A4FU69	1503 aa		28.81	■■■□□ 2.2
EIF4A1-222	ENST00000582050	CEP162	Q5TB80	1403 aa		28.81	■■■□□ 2.2
EIF4A1-222	ENST00000582050	PRG4	Q92954	1404 aa	Predicted RBP	28.81	■■■□□ 2.2
EIF4A1-222	ENST00000582050	RANGAP1	P46060	587 aa	Predicted RBP	28.81	■■■□□ 2.2
EIF4A1-222	ENST00000582050	CLIP1	P30622	1438 aa		28.79	■■■□□ 2.2
EIF4A1-222	ENST00000582050	SAMD9	Q5K651	1589 aa		28.78	■■■□□ 2.2
EIF4A1-222	ENST00000582050	DISP1	Q96F81	1524 aa		28.77	■■■□□ 2.2
EIF4A1-222	ENST00000582050	ARHGAP35	Q9NRY4	1499 aa		28.73	■■■□□ 2.19
EIF4A1-222	ENST00000582050	KIAA0556	O60303	1618 aa		28.73	■■■□□ 2.19
EIF4A1-222	ENST00000582050	ERCC6L2	Q5T890	1561 aa		28.67	■■■□□ 2.18
EIF4A1-222	ENST00000582050	ARHGEF11	O15085	1522 aa		28.65	■■■□□ 2.18
EIF4A1-222	ENST00000582050	P3H3	Q8IVL6	736 aa		28.65	■■■□□ 2.18
EIF4A1-222	ENST00000582050	FHOD3	Q2V2M9	1422 aa		28.61	■■■□□ 2.17
EIF4A1-222	ENST00000582050	ARAP1	Q96P48	1450 aa		28.59	■■■□□ 2.17
EIF4A1-222	ENST00000582050	PTPRG	P23470	1445 aa		28.58	■■■□□ 2.17
EIF4A1-222	ENST00000582050	DNAJC5	Q9H3Z4	198 aa		28.57	■■■□□ 2.16
EIF4A1-222	ENST00000582050	RIMBP3C	A6NJZ7	1639 aa		28.56	■■■□□ 2.16
EIF4A1-222	ENST00000582050	RIMBP3B	A6NNM3	1639 aa		28.56	■■■□□ 2.16
EIF4A1-222	ENST00000582050	FMN1	Q68DA7	1419 aa		28.56	■■■□□ 2.16
EIF4A1-222	ENST00000582050	RIMBP3	Q9UFD9	1639 aa		28.56	■■■□□ 2.16
EIF4A1-222	ENST00000582050	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.48	■■■□□ 2.15
EIF4A1-222	ENST00000582050	VPS8	Q8N3P4	1428 aa		28.43	■■■□□ 2.14
EIF4A1-222	ENST00000582050	UACA	Q9BZF9	1416 aa		28.4	■■■□□ 2.14
EIF4A1-222	ENST00000582050	ABCA8	O94911	1581 aa		28.4	■■■□□ 2.14
EIF4A1-222	ENST00000582050	CASKIN1	Q8WXD9	1431 aa		28.38	■■■□□ 2.13
EIF4A1-222	ENST00000582050	PLB1	Q6P1J6	1458 aa		28.38	■■■□□ 2.13
EIF4A1-222	ENST00000582050	RAPGEF6	Q8TEU7	1601 aa		28.37	■■■□□ 2.13
EIF4A1-222	ENST00000582050	CYB5RL	Q6IPT4	315 aa		28.37	■■■□□ 2.13
EIF4A1-222	ENST00000582050	UHRF1BP1L	A0JNW5	1464 aa		28.35	■■■□□ 2.13
EIF4A1-222	ENST00000582050	FYCO1	Q9BQS8	1478 aa		28.34	■■■□□ 2.13
EIF4A1-222	ENST00000582050	ABCC2	Q92887	1545 aa		28.33	■■■□□ 2.13
EIF4A1-222	ENST00000582050	PCF11	O94913	1555 aa	Known RBP	28.32	■■■□□ 2.12
EIF4A1-222	ENST00000582050	HECW1	Q76N89	1606 aa		28.3	■■■□□ 2.12
EIF4A1-222	ENST00000582050	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.28	■■■□□ 2.12
EIF4A1-222	ENST00000582050	NUP153	P49790	1475 aa	Known RBP	28.27	■■■□□ 2.12
EIF4A1-222	ENST00000582050	ADCY10	Q96PN6	1610 aa		28.26	■■■□□ 2.11
EIF4A1-222	ENST00000582050	CCDC18	Q5T9S5	1454 aa		28.21	■■■□□ 2.11
EIF4A1-222	ENST00000582050	EPRS	P07814	1512 aa	Known RBP	28.2	■■■□□ 2.1
EIF4A1-222	ENST00000582050	KDM5B	Q9UGL1	1544 aa		28.2	■■■□□ 2.1
EIF4A1-222	ENST00000582050	NPM1	P06748	294 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
EIF4A1-222	ENST00000582050	ATP10B	O94823	1461 aa		28.18	■■■□□ 2.1
EIF4A1-222	ENST00000582050	APLP2	Q06481	763 aa		28.17	■■■□□ 2.1
EIF4A1-222	ENST00000582050	MAP3K1	Q13233	1512 aa		28.15	■■■□□ 2.1
EIF4A1-222	ENST00000582050	LRRIQ1	Q96JM4	1722 aa		28.14	■■■□□ 2.1
EIF4A1-222	ENST00000582050	ARID3C	A6NKF2	412 aa		28.12	■■■□□ 2.09
EIF4A1-222	ENST00000582050	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.12	■■■□□ 2.09
EIF4A1-222	ENST00000582050	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.12	■■■□□ 2.09
EIF4A1-222	ENST00000582050	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.11	■■■□□ 2.09
EIF4A1-222	ENST00000582050	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.11	■■■□□ 2.09
EIF4A1-222	ENST00000582050	CDK13	Q14004	1512 aa	Known RBP	28.1	■■■□□ 2.09
EIF4A1-222	ENST00000582050	TIAM1	Q13009	1591 aa		28.08	■■■□□ 2.09
EIF4A1-222	ENST00000582050	CFAP43	Q8NDM7	1665 aa		28.07	■■■□□ 2.08
EIF4A1-222	ENST00000582050	PLEKHD1	A6NEE1	506 aa		28.04	■■■□□ 2.08
EIF4A1-222	ENST00000582050	MAPKBP1	O60336	1514 aa		28	■■■□□ 2.07
EIF4A1-222	ENST00000582050	ASXL2	Q76L83	1435 aa		27.97	■■■□□ 2.07
EIF4A1-222	ENST00000582050	MTUS2	Q5JR59	1369 aa		27.97	■■■□□ 2.07
EIF4A1-222	ENST00000582050	LRRC9	Q6ZRR7	1453 aa		27.96	■■■□□ 2.07
EIF4A1-222	ENST00000582050	TRO	Q12816	1431 aa	Predicted RBP	27.95	■■■□□ 2.07
EIF4A1-222	ENST00000582050	WDR7	Q9Y4E6	1490 aa		27.94	■■■□□ 2.06
EIF4A1-222	ENST00000582050	EHBP1L1	Q8N3D4	1523 aa		27.93	■■■□□ 2.06
EIF4A1-222	ENST00000582050	MAGI3	Q5TCQ9	1506 aa		27.92	■■■□□ 2.06
EIF4A1-222	ENST00000582050	KANK4	Q5T7N3	995 aa	Predicted RBP	27.92	■■■□□ 2.06
EIF4A1-222	ENST00000582050	KCNH8	Q96L42	1107 aa		27.84	■■■□□ 2.05
EIF4A1-222	ENST00000582050	KIF14	Q15058	1648 aa		27.83	■■■□□ 2.05
EIF4A1-222	ENST00000582050	SUPT6H	Q7KZ85	1726 aa	Known RBP	27.82	■■■□□ 2.04
EIF4A1-222	ENST00000582050	ABCC10	Q5T3U5	1492 aa		27.77	■■■□□ 2.04
EIF4A1-222	ENST00000582050	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.77	■■■□□ 2.04
EIF4A1-222	ENST00000582050	NCOA2	Q15596	1464 aa		27.76	■■■□□ 2.04
EIF4A1-222	ENST00000582050	GLI2	P10070	1586 aa		27.74	■■■□□ 2.03
EIF4A1-222	ENST00000582050	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
EIF4A1-222	ENST00000582050	DIP2B	Q9P265	1576 aa		27.73	■■■□□ 2.03
EIF4A1-222	ENST00000582050	ABCA9	Q8IUA7	1624 aa		27.72	■■■□□ 2.03
EIF4A1-222	ENST00000582050	FAM69C	Q0P6D2	419 aa		27.69	■■■□□ 2.02
EIF4A1-222	ENST00000582050	CCNB3	Q8WWL7	1395 aa		27.68	■■■□□ 2.02
EIF4A1-222	ENST00000582050	TTC37	Q6PGP7	1564 aa		27.67	■■■□□ 2.02
EIF4A1-222	ENST00000582050	GPATCH8	Q9UKJ3	1502 aa	Known RBP	27.63	■■■□□ 2.01
EIF4A1-222	ENST00000582050	CD109	Q6YHK3	1445 aa		27.63	■■■□□ 2.01
EIF4A1-222	ENST00000582050	KIF13A	Q9H1H9	1805 aa		27.62	■■■□□ 2.01
EIF4A1-222	ENST00000582050	MYO5C	Q9NQX4	1742 aa		27.62	■■■□□ 2.01
EIF4A1-222	ENST00000582050	PLCH2	O75038	1416 aa		27.62	■■■□□ 2.01
EIF4A1-222	ENST00000582050	MAP3K4	Q9Y6R4	1608 aa		27.62	■■■□□ 2.01
EIF4A1-222	ENST00000582050	ITSN2	Q9NZM3	1697 aa		27.62	■■■□□ 2.01
EIF4A1-222	ENST00000582050	PHLDB1	Q86UU1	1377 aa		27.61	■■■□□ 2.01
EIF4A1-222	ENST00000582050	MYOM3	Q5VTT5	1437 aa		27.61	■■■□□ 2.01
EIF4A1-222	ENST00000582050	ARAP3	Q8WWN8	1544 aa		27.61	■■■□□ 2.01
EIF4A1-222	ENST00000582050	CDC42BPA	Q5VT25	1732 aa		27.6	■■■□□ 2.01
EIF4A1-222	ENST00000582050	PREX2	Q70Z35	1606 aa		27.58	■■■□□ 2.01
EIF4A1-222	ENST00000582050	MIA2	Q96PC5	1412 aa		27.58	■■■□□ 2
EIF4A1-222	ENST00000582050	CFDP1	Q9UEE9	299 aa	Predicted RBP	27.57	■■■□□ 2
EIF4A1-222	ENST00000582050	TRH	P20396	242 aa	Predicted RBP	27.56	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms