RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
RTTN-208ENST00000581709 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
RTTN-208ENST00000581709 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
RTTN-208ENST00000581709 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
RTTN-208ENST00000581709 PRG4Q92954 1404 aaPredicted RBP14.56□□□□□ -0.08
RTTN-208ENST00000581709 ARHGEF11O15085 1522 aa14.54□□□□□ -0.08
RTTN-208ENST00000581709 CARMIL2Q6F5E8 1435 aa14.51□□□□□ -0.09
RTTN-208ENST00000581709 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
RTTN-208ENST00000581709 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
RTTN-208ENST00000581709 KIF21BO75037 1637 aa14.48□□□□□ -0.09
RTTN-208ENST00000581709 IQGAP2Q13576 1575 aa14.48□□□□□ -0.09
RTTN-208ENST00000581709 RIMBP3CA6NJZ7 1639 aa14.47□□□□□ -0.09
RTTN-208ENST00000581709 RIMBP3BA6NNM3 1639 aa14.47□□□□□ -0.09
RTTN-208ENST00000581709 RIMBP3Q9UFD9 1639 aa14.47□□□□□ -0.09
RTTN-208ENST00000581709 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
RTTN-208ENST00000581709 SHROOM2Q13796 1616 aa14.45□□□□□ -0.1
RTTN-208ENST00000581709 PTPRGP23470 1445 aa14.44□□□□□ -0.1
RTTN-208ENST00000581709 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
RTTN-208ENST00000581709 TNIKQ9UKE5 1360 aa14.44□□□□□ -0.1
RTTN-208ENST00000581709 UGGT2Q9NYU1 1516 aa14.43□□□□□ -0.1
RTTN-208ENST00000581709 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
RTTN-208ENST00000581709 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
RTTN-208ENST00000581709 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
RTTN-208ENST00000581709 PHF23Q9BUL5 403 aaPredicted RBP14.4□□□□□ -0.1
RTTN-208ENST00000581709 DISP1Q96F81 1524 aa14.4□□□□□ -0.1
RTTN-208ENST00000581709 NPM1P06748 294 aaKnown RBP eCLIP14.39□□□□□ -0.11
RTTN-208ENST00000581709 CTTNBP2Q8WZ74 1663 aa14.36□□□□□ -0.11
RTTN-208ENST00000581709 KIAA0556O60303 1618 aa14.31□□□□□ -0.12
RTTN-208ENST00000581709 UACAQ9BZF9 1416 aa14.31□□□□□ -0.12
RTTN-208ENST00000581709 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
RTTN-208ENST00000581709 FHOD3Q2V2M9 1422 aa14.28□□□□□ -0.12
RTTN-208ENST00000581709 CLIP1P30622 1438 aa14.27□□□□□ -0.12
RTTN-208ENST00000581709 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
RTTN-208ENST00000581709 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
RTTN-208ENST00000581709 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
RTTN-208ENST00000581709 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
RTTN-208ENST00000581709 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
RTTN-208ENST00000581709 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
RTTN-208ENST00000581709 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
RTTN-208ENST00000581709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
RTTN-208ENST00000581709 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
RTTN-208ENST00000581709 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
RTTN-208ENST00000581709 ARID3CA6NKF2 412 aa14.21□□□□□ -0.13
RTTN-208ENST00000581709 ABCC2Q92887 1545 aa14.2□□□□□ -0.14
RTTN-208ENST00000581709 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
RTTN-208ENST00000581709 ABCA8O94911 1581 aa14.17□□□□□ -0.14
RTTN-208ENST00000581709 KDM5BQ9UGL1 1544 aa14.16□□□□□ -0.14
RTTN-208ENST00000581709 PLEKHD1A6NEE1 506 aa14.16□□□□□ -0.14
RTTN-208ENST00000581709 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
RTTN-208ENST00000581709 FAM69CQ0P6D2 419 aa14.15□□□□□ -0.14
RTTN-208ENST00000581709 ATP10BO94823 1461 aa14.14□□□□□ -0.15
RTTN-208ENST00000581709 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
RTTN-208ENST00000581709 ASXL2Q76L83 1435 aa14.13□□□□□ -0.15
RTTN-208ENST00000581709 NUP153P49790 1475 aaKnown RBP14.12□□□□□ -0.15
RTTN-208ENST00000581709 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
RTTN-208ENST00000581709 RAPGEF6Q8TEU7 1601 aa14.11□□□□□ -0.15
RTTN-208ENST00000581709 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
RTTN-208ENST00000581709 ABCC10Q5T3U5 1492 aa14.07□□□□□ -0.16
RTTN-208ENST00000581709 APLP2Q06481 763 aa14.06□□□□□ -0.16
RTTN-208ENST00000581709 WDR7Q9Y4E6 1490 aa14.06□□□□□ -0.16
RTTN-208ENST00000581709 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
RTTN-208ENST00000581709 VPS8Q8N3P4 1428 aa14.05□□□□□ -0.16
RTTN-208ENST00000581709 FYCO1Q9BQS8 1478 aa14.05□□□□□ -0.16
RTTN-208ENST00000581709 ZCCHC11Q5TAX3 1644 aaKnown RBP14.04□□□□□ -0.16
RTTN-208ENST00000581709 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
RTTN-208ENST00000581709 CCDC18Q5T9S5 1454 aa14.02□□□□□ -0.16
RTTN-208ENST00000581709 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
RTTN-208ENST00000581709 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
RTTN-208ENST00000581709 CD109Q6YHK3 1445 aa13.98□□□□□ -0.17
RTTN-208ENST00000581709 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
RTTN-208ENST00000581709 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.18
RTTN-208ENST00000581709 GLI2P10070 1586 aa13.96□□□□□ -0.18
RTTN-208ENST00000581709 DIP2BQ9P265 1576 aa13.96□□□□□ -0.18
RTTN-208ENST00000581709 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
RTTN-208ENST00000581709 EFCAB2Q5VUJ9 269 aa13.9□□□□□ -0.18
RTTN-208ENST00000581709 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
RTTN-208ENST00000581709 MAP3K1Q13233 1512 aa13.89□□□□□ -0.19
RTTN-208ENST00000581709 PHLDB1Q86UU1 1377 aa13.88□□□□□ -0.19
RTTN-208ENST00000581709 MAGI3Q5TCQ9 1506 aa13.88□□□□□ -0.19
RTTN-208ENST00000581709 PLCH2O75038 1416 aa13.87□□□□□ -0.19
RTTN-208ENST00000581709 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
RTTN-208ENST00000581709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.19
RTTN-208ENST00000581709 KIF13AQ9H1H9 1805 aa13.86□□□□□ -0.19
RTTN-208ENST00000581709 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
RTTN-208ENST00000581709 LRRC9Q6ZRR7 1453 aa13.86□□□□□ -0.19
RTTN-208ENST00000581709 ABCA9Q8IUA7 1624 aa13.85□□□□□ -0.19
RTTN-208ENST00000581709 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
RTTN-208ENST00000581709 KIF14Q15058 1648 aa13.84□□□□□ -0.19
RTTN-208ENST00000581709 MAP3K4Q9Y6R4 1608 aa13.84□□□□□ -0.19
RTTN-208ENST00000581709 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
RTTN-208ENST00000581709 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.2
RTTN-208ENST00000581709 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
RTTN-208ENST00000581709 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
RTTN-208ENST00000581709 FANCAO15360 1455 aa13.81□□□□□ -0.2
RTTN-208ENST00000581709 NEO1Q92859 1461 aa13.81□□□□□ -0.2
RTTN-208ENST00000581709 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
RTTN-208ENST00000581709 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
RTTN-208ENST00000581709 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
RTTN-208ENST00000581709 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
RTTN-208ENST00000581709 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms