RNA–Protein interactions for RNA: ENST00000581486.5

NCOA4-204, Transcript of nuclear receptor coactivator 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCOA4, Length 3,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-204ENST00000581486 TDRD9Q8NDG6 1382 aaKnown RBP10.97□□□□□ -0.65
NCOA4-204ENST00000581486 CUX2O14529 1486 aa10.97□□□□□ -0.65
NCOA4-204ENST00000581486 FKBP8Q14318 412 aa10.97□□□□□ -0.65
NCOA4-204ENST00000581486 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
NCOA4-204ENST00000581486 ANP32CO43423 234 aa10.96□□□□□ -0.66
NCOA4-204ENST00000581486 KIF27Q86VH2 1401 aa10.95□□□□□ -0.66
NCOA4-204ENST00000581486 FAM9BQ8IZU0 186 aa10.93□□□□□ -0.66
NCOA4-204ENST00000581486 MTUS2Q5JR59 1369 aa10.93□□□□□ -0.66
NCOA4-204ENST00000581486 VPS8Q8N3P4 1428 aa10.93□□□□□ -0.66
NCOA4-204ENST00000581486 CARMIL1Q5VZK9 1371 aa10.92□□□□□ -0.66
NCOA4-204ENST00000581486 KDM2AQ9Y2K7 1162 aa10.92□□□□□ -0.66
NCOA4-204ENST00000581486 ERICH3Q5RHP9 1530 aa10.9□□□□□ -0.66
NCOA4-204ENST00000581486 HNRNPUQ00839 825 aaKnown RBP eCLIP10.9□□□□□ -0.66
NCOA4-204ENST00000581486 TONSLQ96HA7 1378 aa10.9□□□□□ -0.66
NCOA4-204ENST00000581486 CFTRP13569 1480 aa10.89□□□□□ -0.67
NCOA4-204ENST00000581486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■□□□□ 11.2
NCOA4-204ENST00000581486 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
NCOA4-204ENST00000581486 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
NCOA4-204ENST00000581486 CUX1P39880 1505 aa10.85□□□□□ -0.67
NCOA4-204ENST00000581486 FHOD3Q2V2M9 1422 aa10.84□□□□□ -0.67
NCOA4-204ENST00000581486 ERICH6Q7L0X2 663 aa10.84□□□□□ -0.67
NCOA4-204ENST00000581486 CHMP7Q8WUX9 453 aaPredicted RBP10.84□□□□□ -0.67
NCOA4-204ENST00000581486 RAB3GAP2Q9H2M9 1393 aa10.84□□□□□ -0.67
NCOA4-204ENST00000581486 PRXQ9BXM0 1461 aa10.84□□□□□ -0.67
NCOA4-204ENST00000581486 RGL3Q3MIN7 710 aa10.83□□□□□ -0.68
NCOA4-204ENST00000581486 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
NCOA4-204ENST00000581486 ARAP1Q96P48 1450 aa10.8□□□□□ -0.68
NCOA4-204ENST00000581486 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
NCOA4-204ENST00000581486 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
NCOA4-204ENST00000581486 IGF1RP08069 1367 aa10.78□□□□□ -0.68
NCOA4-204ENST00000581486 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
NCOA4-204ENST00000581486 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
NCOA4-204ENST00000581486 NESP48681 1621 aa10.75□□□□□ -0.69
NCOA4-204ENST00000581486 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
NCOA4-204ENST00000581486 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
NCOA4-204ENST00000581486 ZNF644Q9H582 1327 aaPredicted RBP10.72□□□□□ -0.69
NCOA4-204ENST00000581486 CFDP1Q9UEE9 299 aaPredicted RBP10.72□□□□□ -0.69
NCOA4-204ENST00000581486 PHLDB1Q86UU1 1377 aa10.72□□□□□ -0.69
NCOA4-204ENST00000581486 CDK11AQ9UQ88 783 aaPredicted RBP10.71□□□□□ -0.69
NCOA4-204ENST00000581486 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
NCOA4-204ENST00000581486 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
NCOA4-204ENST00000581486 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
NCOA4-204ENST00000581486 PLPPR3Q6T4P5 718 aa10.68□□□□□ -0.7
NCOA4-204ENST00000581486 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
NCOA4-204ENST00000581486 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
NCOA4-204ENST00000581486 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
NCOA4-204ENST00000581486 WDR97A6NE52 1622 aa10.67□□□□□ -0.7
NCOA4-204ENST00000581486 TSPY4P0CV99 314 aa10.66□□□□□ -0.7
NCOA4-204ENST00000581486 TSPY10P0CW01 314 aa10.66□□□□□ -0.7
NCOA4-204ENST00000581486 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
NCOA4-204ENST00000581486 NPM2Q86SE8 214 aaKnown RBP10.66□□□□□ -0.7
NCOA4-204ENST00000581486 FANCD2Q9BXW9 1451 aa10.65□□□□□ -0.7
NCOA4-204ENST00000581486 ARHGAP35Q9NRY4 1499 aa10.65□□□□□ -0.7
NCOA4-204ENST00000581486 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
NCOA4-204ENST00000581486 MAP3K1Q13233 1512 aa10.64□□□□□ -0.71
NCOA4-204ENST00000581486 PDS5BQ9NTI5 1447 aa10.64□□□□□ -0.71
NCOA4-204ENST00000581486 PLEKHD1A6NEE1 506 aa10.63□□□□□ -0.71
NCOA4-204ENST00000581486 MPHOSPH9Q99550 1183 aa10.63□□□□□ -0.71
NCOA4-204ENST00000581486 B4GALNT3Q6L9W6 998 aa10.63□□□□□ -0.71
NCOA4-204ENST00000581486 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
NCOA4-204ENST00000581486 TSHZ2Q9NRE2 1034 aa10.63□□□□□ -0.71
NCOA4-204ENST00000581486 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.714e-7■■■■□ 25.8
NCOA4-204ENST00000581486 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
NCOA4-204ENST00000581486 LAMC3Q9Y6N6 1575 aa10.61□□□□□ -0.71
NCOA4-204ENST00000581486 FHAD1B1AJZ9 1412 aa10.61□□□□□ -0.71
NCOA4-204ENST00000581486 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.712e-8■□□□□ 10.3
NCOA4-204ENST00000581486 PKD2Q13563 968 aa10.61□□□□□ -0.71
NCOA4-204ENST00000581486 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
NCOA4-204ENST00000581486 CUL7Q14999 1698 aa10.6□□□□□ -0.71
NCOA4-204ENST00000581486 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
NCOA4-204ENST00000581486 CARD11Q9BXL7 1154 aa10.59□□□□□ -0.71
NCOA4-204ENST00000581486 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
NCOA4-204ENST00000581486 RRBP1Q9P2E9 1410 aaKnown RBP10.58□□□□□ -0.72
NCOA4-204ENST00000581486 CC2D1BQ5T0F9 858 aaKnown RBP10.58□□□□□ -0.72
NCOA4-204ENST00000581486 CLSPNQ9HAW4 1339 aa10.57□□□□□ -0.72
NCOA4-204ENST00000581486 CTTNBP2Q8WZ74 1663 aa10.57□□□□□ -0.72
NCOA4-204ENST00000581486 ERCC6Q03468 1493 aa10.56□□□□□ -0.72
NCOA4-204ENST00000581486 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
NCOA4-204ENST00000581486 NBR1Q14596 966 aa10.55□□□□□ -0.72
NCOA4-204ENST00000581486 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
NCOA4-204ENST00000581486 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
NCOA4-204ENST00000581486 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
NCOA4-204ENST00000581486 MYT1Q01538 1121 aa10.54□□□□□ -0.72
NCOA4-204ENST00000581486 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
NCOA4-204ENST00000581486 EFCAB5A4FU69 1503 aa10.53□□□□□ -0.72
NCOA4-204ENST00000581486 POLA1P09884 1462 aaPredicted RBP10.52□□□□□ -0.72
NCOA4-204ENST00000581486 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
NCOA4-204ENST00000581486 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
NCOA4-204ENST00000581486 PLEKHG5O94827 1062 aa10.5□□□□□ -0.73
NCOA4-204ENST00000581486 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
NCOA4-204ENST00000581486 LRRC9Q6ZRR7 1453 aa10.5□□□□□ -0.73
NCOA4-204ENST00000581486 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
NCOA4-204ENST00000581486 C11orf95C9JLR9 678 aaPredicted RBP10.49□□□□□ -0.73
NCOA4-204ENST00000581486 FMN1Q68DA7 1419 aa10.49□□□□□ -0.73
NCOA4-204ENST00000581486 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
NCOA4-204ENST00000581486 URB2Q14146 1524 aaKnown RBP10.48□□□□□ -0.73
NCOA4-204ENST00000581486 NUP155O75694 1391 aa10.48□□□□□ -0.73
NCOA4-204ENST00000581486 SAMD9Q5K651 1589 aa10.48□□□□□ -0.73
NCOA4-204ENST00000581486 MAPKBP1O60336 1514 aa10.48□□□□□ -0.73
NCOA4-204ENST00000581486 NBPF8Q3BBV2 869 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms