RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 KDM6BO15054 1643 aa12.2□□□□□ -0.46
TVP23C-208ENST00000581273 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
TVP23C-208ENST00000581273 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
TVP23C-208ENST00000581273 FAM69CQ0P6D2 419 aa12.17□□□□□ -0.46
TVP23C-208ENST00000581273 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
TVP23C-208ENST00000581273 SNAPC4Q5SXM2 1469 aa12.16□□□□□ -0.46
TVP23C-208ENST00000581273 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
TVP23C-208ENST00000581273 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
TVP23C-208ENST00000581273 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
TVP23C-208ENST00000581273 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
TVP23C-208ENST00000581273 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
TVP23C-208ENST00000581273 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
TVP23C-208ENST00000581273 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
TVP23C-208ENST00000581273 RAD54L2Q9Y4B4 1467 aa12.05□□□□□ -0.48
TVP23C-208ENST00000581273 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
TVP23C-208ENST00000581273 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.48
TVP23C-208ENST00000581273 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
TVP23C-208ENST00000581273 MAGI1Q96QZ7 1491 aaPredicted RBP12.01□□□□□ -0.49
TVP23C-208ENST00000581273 SOGA1O94964 1423 aa12□□□□□ -0.49
TVP23C-208ENST00000581273 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
TVP23C-208ENST00000581273 CEP170Q5SW79 1584 aa11.96□□□□□ -0.5
TVP23C-208ENST00000581273 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
TVP23C-208ENST00000581273 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
TVP23C-208ENST00000581273 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
TVP23C-208ENST00000581273 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
TVP23C-208ENST00000581273 ZBTB22O15209 634 aa11.9□□□□□ -0.5
TVP23C-208ENST00000581273 NPM1P06748 294 aaKnown RBP eCLIP11.9□□□□□ -0.5
TVP23C-208ENST00000581273 CUX1P39880 1505 aa11.9□□□□□ -0.5
TVP23C-208ENST00000581273 PBRM1Q86U86 1689 aa11.87□□□□□ -0.51
TVP23C-208ENST00000581273 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
TVP23C-208ENST00000581273 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
TVP23C-208ENST00000581273 COL17A1Q9UMD9 1497 aaPredicted RBP11.84□□□□□ -0.51
TVP23C-208ENST00000581273 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
TVP23C-208ENST00000581273 SHROOM2Q13796 1616 aa11.83□□□□□ -0.52
TVP23C-208ENST00000581273 PPRC1Q5VV67 1664 aaKnown RBP11.82□□□□□ -0.52
TVP23C-208ENST00000581273 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
TVP23C-208ENST00000581273 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
TVP23C-208ENST00000581273 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
TVP23C-208ENST00000581273 PRG4Q92954 1404 aaPredicted RBP11.78□□□□□ -0.52
TVP23C-208ENST00000581273 GRIN2AQ12879 1464 aa11.78□□□□□ -0.52
TVP23C-208ENST00000581273 NUP160Q12769 1436 aa11.77□□□□□ -0.52
TVP23C-208ENST00000581273 ABCA5Q8WWZ7 1642 aa11.77□□□□□ -0.53
TVP23C-208ENST00000581273 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
TVP23C-208ENST00000581273 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
TVP23C-208ENST00000581273 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
TVP23C-208ENST00000581273 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
TVP23C-208ENST00000581273 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
TVP23C-208ENST00000581273 WRNQ14191 1432 aaPredicted RBP eCLIP11.7□□□□□ -0.54
TVP23C-208ENST00000581273 HSPA2P54652 639 aa11.7□□□□□ -0.54
TVP23C-208ENST00000581273 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
TVP23C-208ENST00000581273 PTPRMP28827 1452 aa11.69□□□□□ -0.54
TVP23C-208ENST00000581273 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
TVP23C-208ENST00000581273 KIF21BO75037 1637 aa11.67□□□□□ -0.54
TVP23C-208ENST00000581273 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
TVP23C-208ENST00000581273 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
TVP23C-208ENST00000581273 PPARGC1BQ86YN6 1023 aaKnown RBP11.65□□□□□ -0.54
TVP23C-208ENST00000581273 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
TVP23C-208ENST00000581273 GLI2P10070 1586 aa11.63□□□□□ -0.55
TVP23C-208ENST00000581273 ASXL2Q76L83 1435 aa11.6□□□□□ -0.55
TVP23C-208ENST00000581273 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
TVP23C-208ENST00000581273 ADAMTSL3P82987 1691 aa11.59□□□□□ -0.55
TVP23C-208ENST00000581273 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
TVP23C-208ENST00000581273 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
TVP23C-208ENST00000581273 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
TVP23C-208ENST00000581273 PLB1Q6P1J6 1458 aa11.56□□□□□ -0.56
TVP23C-208ENST00000581273 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
TVP23C-208ENST00000581273 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
TVP23C-208ENST00000581273 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
TVP23C-208ENST00000581273 MADDQ8WXG6 1647 aa11.52□□□□□ -0.57
TVP23C-208ENST00000581273 CUL7Q14999 1698 aa11.52□□□□□ -0.57
TVP23C-208ENST00000581273 ABCC2Q92887 1545 aa11.5□□□□□ -0.57
TVP23C-208ENST00000581273 CENPBP07199 599 aaPredicted RBP11.5□□□□□ -0.57
TVP23C-208ENST00000581273 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.57
TVP23C-208ENST00000581273 BCORL1Q5H9F3 1711 aa11.46□□□□□ -0.58
TVP23C-208ENST00000581273 MED1Q15648 1581 aaPredicted RBP11.45□□□□□ -0.58
TVP23C-208ENST00000581273 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
TVP23C-208ENST00000581273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.58
TVP23C-208ENST00000581273 PTPRGP23470 1445 aa11.44□□□□□ -0.58
TVP23C-208ENST00000581273 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
TVP23C-208ENST00000581273 IGF1RP08069 1367 aa11.43□□□□□ -0.58
TVP23C-208ENST00000581273 ARID4BQ4LE39 1312 aaPredicted RBP11.43□□□□□ -0.58
TVP23C-208ENST00000581273 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
TVP23C-208ENST00000581273 KIF27Q86VH2 1401 aa11.42□□□□□ -0.58
TVP23C-208ENST00000581273 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
TVP23C-208ENST00000581273 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
TVP23C-208ENST00000581273 CARMIL2Q6F5E8 1435 aa11.37□□□□□ -0.59
TVP23C-208ENST00000581273 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
TVP23C-208ENST00000581273 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
TVP23C-208ENST00000581273 YEATS2Q9ULM3 1422 aa11.36□□□□□ -0.59
TVP23C-208ENST00000581273 POTEDQ86YR6 584 aa11.36□□□□□ -0.59
TVP23C-208ENST00000581273 CD109Q6YHK3 1445 aa11.35□□□□□ -0.59
TVP23C-208ENST00000581273 LTBP4Q8N2S1 1624 aa11.35□□□□□ -0.59
TVP23C-208ENST00000581273 UBAP1LF5GYI3 381 aa11.35□□□□□ -0.59
TVP23C-208ENST00000581273 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
TVP23C-208ENST00000581273 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
TVP23C-208ENST00000581273 ZCCHC11Q5TAX3 1644 aaKnown RBP11.34□□□□□ -0.59
TVP23C-208ENST00000581273 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
TVP23C-208ENST00000581273 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
TVP23C-208ENST00000581273 HSPA1LP34931 641 aa11.31□□□□□ -0.6
TVP23C-208ENST00000581273 UACAQ9BZF9 1416 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms