RNA–Protein interactions for RNA: ENST00000581246.5

MSL1-208, Transcript of male specific lethal 1 homolog, humanhuman

TSL 4

Gene MSL1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-208ENST00000581246 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
MSL1-208ENST00000581246 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
MSL1-208ENST00000581246 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
MSL1-208ENST00000581246 CLIP1P30622 1438 aa16.41■□□□□ 0.22
MSL1-208ENST00000581246 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
MSL1-208ENST00000581246 MAGI1Q96QZ7 1491 aaPredicted RBP16.41■□□□□ 0.22
MSL1-208ENST00000581246 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
MSL1-208ENST00000581246 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
MSL1-208ENST00000581246 ARHGAP35Q9NRY4 1499 aa16.33■□□□□ 0.2
MSL1-208ENST00000581246 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
MSL1-208ENST00000581246 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
MSL1-208ENST00000581246 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
MSL1-208ENST00000581246 CHMP7Q8WUX9 453 aaPredicted RBP16.25■□□□□ 0.19
MSL1-208ENST00000581246 NUP160Q12769 1436 aa16.25■□□□□ 0.19
MSL1-208ENST00000581246 IQGAP2Q13576 1575 aa16.25■□□□□ 0.19
MSL1-208ENST00000581246 SAMD9Q5K651 1589 aa16.25■□□□□ 0.19
MSL1-208ENST00000581246 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
MSL1-208ENST00000581246 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
MSL1-208ENST00000581246 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
MSL1-208ENST00000581246 CHD1O14646 1710 aa16.24■□□□□ 0.19
MSL1-208ENST00000581246 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
MSL1-208ENST00000581246 FBLN2P98095 1184 aa16.17■□□□□ 0.18
MSL1-208ENST00000581246 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
MSL1-208ENST00000581246 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
MSL1-208ENST00000581246 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
MSL1-208ENST00000581246 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
MSL1-208ENST00000581246 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
MSL1-208ENST00000581246 PPP4R3CPQ6ZMV5 832 aa16.07■□□□□ 0.16
MSL1-208ENST00000581246 PPARGC1BQ86YN6 1023 aaKnown RBP16.07■□□□□ 0.16
MSL1-208ENST00000581246 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
MSL1-208ENST00000581246 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
MSL1-208ENST00000581246 PCF11O94913 1555 aaKnown RBP16.07■□□□□ 0.16
MSL1-208ENST00000581246 SHROOM2Q13796 1616 aa16.07■□□□□ 0.16
MSL1-208ENST00000581246 MAP3K1Q13233 1512 aa16.06■□□□□ 0.16
MSL1-208ENST00000581246 CLASP1Q7Z460 1538 aa16.05■□□□□ 0.16
MSL1-208ENST00000581246 FYCO1Q9BQS8 1478 aa16.04■□□□□ 0.16
MSL1-208ENST00000581246 LRRIQ1Q96JM4 1722 aa16.03■□□□□ 0.16
MSL1-208ENST00000581246 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
MSL1-208ENST00000581246 TIAM1Q13009 1591 aa16■□□□□ 0.15
MSL1-208ENST00000581246 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
MSL1-208ENST00000581246 APLP2Q06481 763 aa15.99■□□□□ 0.15
MSL1-208ENST00000581246 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
MSL1-208ENST00000581246 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
MSL1-208ENST00000581246 PRG4Q92954 1404 aaPredicted RBP15.97■□□□□ 0.15
MSL1-208ENST00000581246 SCAF1Q9H7N4 1312 aaKnown RBP15.95■□□□□ 0.14
MSL1-208ENST00000581246 PCGF6Q9BYE7 350 aa15.95■□□□□ 0.14
MSL1-208ENST00000581246 ERCC6L2Q5T890 1561 aa15.93■□□□□ 0.14
MSL1-208ENST00000581246 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
MSL1-208ENST00000581246 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
MSL1-208ENST00000581246 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
MSL1-208ENST00000581246 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
MSL1-208ENST00000581246 MAPK8IP2Q13387 824 aaPredicted RBP15.9■□□□□ 0.14
MSL1-208ENST00000581246 ABCA8O94911 1581 aa15.9■□□□□ 0.14
MSL1-208ENST00000581246 TTBK1Q5TCY1 1321 aaPredicted RBP15.9■□□□□ 0.14
MSL1-208ENST00000581246 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
MSL1-208ENST00000581246 NUP153P49790 1475 aaKnown RBP15.89■□□□□ 0.13
MSL1-208ENST00000581246 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
MSL1-208ENST00000581246 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
MSL1-208ENST00000581246 CCDC18Q5T9S5 1454 aa15.88■□□□□ 0.13
MSL1-208ENST00000581246 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
MSL1-208ENST00000581246 PTPRGP23470 1445 aa15.86■□□□□ 0.13
MSL1-208ENST00000581246 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
MSL1-208ENST00000581246 CDK13Q14004 1512 aaKnown RBP15.84■□□□□ 0.13
MSL1-208ENST00000581246 EHBP1L1Q8N3D4 1523 aa15.79■□□□□ 0.12
MSL1-208ENST00000581246 RRBP1Q9P2E9 1410 aaKnown RBP15.79■□□□□ 0.12
MSL1-208ENST00000581246 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
MSL1-208ENST00000581246 ATP10BO94823 1461 aa15.78■□□□□ 0.12
MSL1-208ENST00000581246 UACAQ9BZF9 1416 aa15.78■□□□□ 0.12
MSL1-208ENST00000581246 MTUS2Q5JR59 1369 aa15.77■□□□□ 0.12
MSL1-208ENST00000581246 PHLDB1Q86UU1 1377 aa15.77■□□□□ 0.12
MSL1-208ENST00000581246 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.11
MSL1-208ENST00000581246 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
MSL1-208ENST00000581246 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
MSL1-208ENST00000581246 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
MSL1-208ENST00000581246 ARID3CA6NKF2 412 aa15.73■□□□□ 0.11
MSL1-208ENST00000581246 ADCY10Q96PN6 1610 aa15.71■□□□□ 0.11
MSL1-208ENST00000581246 TROQ12816 1431 aaPredicted RBP15.7■□□□□ 0.1
MSL1-208ENST00000581246 CDK11AQ9UQ88 783 aaPredicted RBP15.7■□□□□ 0.1
MSL1-208ENST00000581246 CCNB3Q8WWL7 1395 aa15.7■□□□□ 0.1
MSL1-208ENST00000581246 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
MSL1-208ENST00000581246 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
MSL1-208ENST00000581246 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
MSL1-208ENST00000581246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.66■□□□□ 0.1
MSL1-208ENST00000581246 ZCCHC11Q5TAX3 1644 aaKnown RBP15.66■□□□□ 0.1
MSL1-208ENST00000581246 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
MSL1-208ENST00000581246 KIF14Q15058 1648 aa15.65■□□□□ 0.1
MSL1-208ENST00000581246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
MSL1-208ENST00000581246 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
MSL1-208ENST00000581246 PLEKHD1A6NEE1 506 aa15.64■□□□□ 0.09
MSL1-208ENST00000581246 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
MSL1-208ENST00000581246 ABCC10Q5T3U5 1492 aa15.62■□□□□ 0.09
MSL1-208ENST00000581246 TCOF1Q13428 1488 aaKnown RBP15.61■□□□□ 0.09
MSL1-208ENST00000581246 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
MSL1-208ENST00000581246 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
MSL1-208ENST00000581246 KCNA4P22459 653 aa15.6■□□□□ 0.09
MSL1-208ENST00000581246 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
MSL1-208ENST00000581246 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
MSL1-208ENST00000581246 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
MSL1-208ENST00000581246 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
MSL1-208ENST00000581246 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms