RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
SKA2-206ENST00000581068 CLIP1P30622 1438 aa17.56■□□□□ 0.4
SKA2-206ENST00000581068 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
SKA2-206ENST00000581068 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
SKA2-206ENST00000581068 FBLN2P98095 1184 aa17.52■□□□□ 0.4
SKA2-206ENST00000581068 CTTNBP2Q8WZ74 1663 aa17.52■□□□□ 0.39
SKA2-206ENST00000581068 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
SKA2-206ENST00000581068 NUP160Q12769 1436 aa17.43■□□□□ 0.38
SKA2-206ENST00000581068 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
SKA2-206ENST00000581068 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
SKA2-206ENST00000581068 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
SKA2-206ENST00000581068 EFCAB5A4FU69 1503 aa17.4■□□□□ 0.38
SKA2-206ENST00000581068 ARAP1Q96P48 1450 aa17.39■□□□□ 0.37
SKA2-206ENST00000581068 CHD1O14646 1710 aa17.39■□□□□ 0.37
SKA2-206ENST00000581068 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
SKA2-206ENST00000581068 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
SKA2-206ENST00000581068 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
SKA2-206ENST00000581068 SAMD9Q5K651 1589 aa17.34■□□□□ 0.37
SKA2-206ENST00000581068 JPH4Q96JJ6 628 aa17.31■□□□□ 0.36
SKA2-206ENST00000581068 FHOD3Q2V2M9 1422 aa17.3■□□□□ 0.36
SKA2-206ENST00000581068 APLP2Q06481 763 aa17.26■□□□□ 0.35
SKA2-206ENST00000581068 FMN1Q68DA7 1419 aa17.26■□□□□ 0.35
SKA2-206ENST00000581068 CARMIL2Q6F5E8 1435 aa17.26■□□□□ 0.35
SKA2-206ENST00000581068 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
SKA2-206ENST00000581068 KIAA0556O60303 1618 aa17.24■□□□□ 0.35
SKA2-206ENST00000581068 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
SKA2-206ENST00000581068 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
SKA2-206ENST00000581068 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.34
SKA2-206ENST00000581068 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
SKA2-206ENST00000581068 CASKIN1Q8WXD9 1431 aa17.2■□□□□ 0.34
SKA2-206ENST00000581068 FYCO1Q9BQS8 1478 aa17.17■□□□□ 0.34
SKA2-206ENST00000581068 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
SKA2-206ENST00000581068 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
SKA2-206ENST00000581068 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
SKA2-206ENST00000581068 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
SKA2-206ENST00000581068 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
SKA2-206ENST00000581068 PTPRGP23470 1445 aa17.1■□□□□ 0.33
SKA2-206ENST00000581068 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
SKA2-206ENST00000581068 HECW1Q76N89 1606 aa17.07■□□□□ 0.32
SKA2-206ENST00000581068 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
SKA2-206ENST00000581068 KANK4Q5T7N3 995 aaPredicted RBP17.06■□□□□ 0.32
SKA2-206ENST00000581068 RAPGEF6Q8TEU7 1601 aa17.06■□□□□ 0.32
SKA2-206ENST00000581068 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
SKA2-206ENST00000581068 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
SKA2-206ENST00000581068 CFAP43Q8NDM7 1665 aa17.04■□□□□ 0.32
SKA2-206ENST00000581068 PLB1Q6P1J6 1458 aa17.03■□□□□ 0.32
SKA2-206ENST00000581068 ABCA8O94911 1581 aa17.02■□□□□ 0.31
SKA2-206ENST00000581068 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
SKA2-206ENST00000581068 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
SKA2-206ENST00000581068 NUP153P49790 1475 aaKnown RBP17■□□□□ 0.31
SKA2-206ENST00000581068 UACAQ9BZF9 1416 aa16.99■□□□□ 0.31
SKA2-206ENST00000581068 LRRIQ1Q96JM4 1722 aa16.99■□□□□ 0.31
SKA2-206ENST00000581068 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
SKA2-206ENST00000581068 MTUS2Q5JR59 1369 aa16.96■□□□□ 0.31
SKA2-206ENST00000581068 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.3
SKA2-206ENST00000581068 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
SKA2-206ENST00000581068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
SKA2-206ENST00000581068 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
SKA2-206ENST00000581068 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
SKA2-206ENST00000581068 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
SKA2-206ENST00000581068 ATP10BO94823 1461 aa16.92■□□□□ 0.3
SKA2-206ENST00000581068 EHBP1L1Q8N3D4 1523 aa16.91■□□□□ 0.3
SKA2-206ENST00000581068 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
SKA2-206ENST00000581068 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
SKA2-206ENST00000581068 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
SKA2-206ENST00000581068 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
SKA2-206ENST00000581068 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
SKA2-206ENST00000581068 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
SKA2-206ENST00000581068 SUPT6HQ7KZ85 1726 aaKnown RBP16.85■□□□□ 0.29
SKA2-206ENST00000581068 TROQ12816 1431 aaPredicted RBP16.85■□□□□ 0.29
SKA2-206ENST00000581068 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
SKA2-206ENST00000581068 PHLDB1Q86UU1 1377 aa16.83■□□□□ 0.28
SKA2-206ENST00000581068 KDM5BQ9UGL1 1544 aa16.82■□□□□ 0.28
SKA2-206ENST00000581068 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
SKA2-206ENST00000581068 ADCY10Q96PN6 1610 aa16.8■□□□□ 0.28
SKA2-206ENST00000581068 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
SKA2-206ENST00000581068 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
SKA2-206ENST00000581068 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
SKA2-206ENST00000581068 CCNB3Q8WWL7 1395 aa16.78■□□□□ 0.28
SKA2-206ENST00000581068 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
SKA2-206ENST00000581068 POTEDQ86YR6 584 aa16.78■□□□□ 0.28
SKA2-206ENST00000581068 MYOM3Q5VTT5 1437 aa16.78■□□□□ 0.28
SKA2-206ENST00000581068 MSH5O43196 834 aa16.77■□□□□ 0.28
SKA2-206ENST00000581068 NPM1P06748 294 aaKnown RBP eCLIP16.77■□□□□ 0.28
SKA2-206ENST00000581068 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
SKA2-206ENST00000581068 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
SKA2-206ENST00000581068 KIF14Q15058 1648 aa16.73■□□□□ 0.27
SKA2-206ENST00000581068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.274e-8■■■■■ 44
SKA2-206ENST00000581068 FAM50AQ14320 339 aaKnown RBP16.72■□□□□ 0.27
SKA2-206ENST00000581068 MIA2Q96PC5 1412 aa16.71■□□□□ 0.27
SKA2-206ENST00000581068 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
SKA2-206ENST00000581068 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
SKA2-206ENST00000581068 KCNH8Q96L42 1107 aa16.69■□□□□ 0.26
SKA2-206ENST00000581068 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
SKA2-206ENST00000581068 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
SKA2-206ENST00000581068 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
SKA2-206ENST00000581068 ASXL2Q76L83 1435 aa16.66■□□□□ 0.26
SKA2-206ENST00000581068 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
SKA2-206ENST00000581068 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
SKA2-206ENST00000581068 ITSN2Q9NZM3 1697 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms