RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CDK5RAP3-219ENST00000580670 CLIP1P30622 1438 aa22.1■■□□□ 1.13
CDK5RAP3-219ENST00000580670 CHD1O14646 1710 aa22.05■■□□□ 1.12
CDK5RAP3-219ENST00000580670 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
CDK5RAP3-219ENST00000580670 NUP160Q12769 1436 aa22.02■■□□□ 1.12
CDK5RAP3-219ENST00000580670 KIAA0586Q9BVV6 1533 aa22■■□□□ 1.11
CDK5RAP3-219ENST00000580670 IQGAP2Q13576 1575 aa22■■□□□ 1.11
CDK5RAP3-219ENST00000580670 ARHGAP35Q9NRY4 1499 aa21.96■■□□□ 1.11
CDK5RAP3-219ENST00000580670 EFCAB5A4FU69 1503 aa21.92■■□□□ 1.1
CDK5RAP3-219ENST00000580670 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
CDK5RAP3-219ENST00000580670 UGGT2Q9NYU1 1516 aa21.89■■□□□ 1.09
CDK5RAP3-219ENST00000580670 P3H3Q8IVL6 736 aa21.89■■□□□ 1.09
CDK5RAP3-219ENST00000580670 SAMD9Q5K651 1589 aa21.88■■□□□ 1.09
CDK5RAP3-219ENST00000580670 VPS8Q8N3P4 1428 aa21.85■■□□□ 1.09
CDK5RAP3-219ENST00000580670 JPH4Q96JJ6 628 aa21.84■■□□□ 1.09
CDK5RAP3-219ENST00000580670 FHOD3Q2V2M9 1422 aa21.84■■□□□ 1.09
CDK5RAP3-219ENST00000580670 CLASP1Q7Z460 1538 aa21.81■■□□□ 1.08
CDK5RAP3-219ENST00000580670 DISP1Q96F81 1524 aa21.79■■□□□ 1.08
CDK5RAP3-219ENST00000580670 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
CDK5RAP3-219ENST00000580670 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
CDK5RAP3-219ENST00000580670 CARMIL2Q6F5E8 1435 aa21.76■■□□□ 1.07
CDK5RAP3-219ENST00000580670 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
CDK5RAP3-219ENST00000580670 PRG4Q92954 1404 aaPredicted RBP21.74■■□□□ 1.07
CDK5RAP3-219ENST00000580670 FMN1Q68DA7 1419 aa21.73■■□□□ 1.07
CDK5RAP3-219ENST00000580670 PCF11O94913 1555 aaKnown RBP21.67■■□□□ 1.06
CDK5RAP3-219ENST00000580670 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-219ENST00000580670 CASKIN1Q8WXD9 1431 aa21.65■■□□□ 1.06
CDK5RAP3-219ENST00000580670 APLP2Q06481 763 aa21.64■■□□□ 1.06
CDK5RAP3-219ENST00000580670 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
CDK5RAP3-219ENST00000580670 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
CDK5RAP3-219ENST00000580670 ATP1B4Q9UN42 357 aaPredicted RBP21.62■■□□□ 1.05
CDK5RAP3-219ENST00000580670 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
CDK5RAP3-219ENST00000580670 PTPRGP23470 1445 aa21.57■■□□□ 1.04
CDK5RAP3-219ENST00000580670 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
CDK5RAP3-219ENST00000580670 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
CDK5RAP3-219ENST00000580670 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
CDK5RAP3-219ENST00000580670 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
CDK5RAP3-219ENST00000580670 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
CDK5RAP3-219ENST00000580670 LRRIQ1Q96JM4 1722 aa21.49■■□□□ 1.03
CDK5RAP3-219ENST00000580670 ABCA8O94911 1581 aa21.49■■□□□ 1.03
CDK5RAP3-219ENST00000580670 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
CDK5RAP3-219ENST00000580670 NUP153P49790 1475 aaKnown RBP21.47■■□□□ 1.03
CDK5RAP3-219ENST00000580670 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
CDK5RAP3-219ENST00000580670 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
CDK5RAP3-219ENST00000580670 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
CDK5RAP3-219ENST00000580670 ARID3CA6NKF2 412 aa21.45■■□□□ 1.02
CDK5RAP3-219ENST00000580670 UACAQ9BZF9 1416 aa21.43■■□□□ 1.02
CDK5RAP3-219ENST00000580670 CDK13Q14004 1512 aaKnown RBP21.42■■□□□ 1.02
CDK5RAP3-219ENST00000580670 LRRC9Q6ZRR7 1453 aa21.42■■□□□ 1.02
CDK5RAP3-219ENST00000580670 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
CDK5RAP3-219ENST00000580670 ABCC2Q92887 1545 aa21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 HNRNPUL2Q1KMD3 747 aaKnown RBP21.38■■□□□ 1.01
CDK5RAP3-219ENST00000580670 MTUS2Q5JR59 1369 aa21.36■■□□□ 1.01
CDK5RAP3-219ENST00000580670 UHRF1BP1LA0JNW5 1464 aa21.34■■□□□ 1.01
CDK5RAP3-219ENST00000580670 ATP10BO94823 1461 aa21.34■■□□□ 1.01
CDK5RAP3-219ENST00000580670 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1
CDK5RAP3-219ENST00000580670 MAGI3Q5TCQ9 1506 aa21.32■■□□□ 1
CDK5RAP3-219ENST00000580670 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 CDK11AQ9UQ88 783 aaPredicted RBP21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3CA6NJZ7 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3BA6NNM3 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 RIMBP3Q9UFD9 1639 aa21.31■■□□□ 1
CDK5RAP3-219ENST00000580670 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
CDK5RAP3-219ENST00000580670 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
CDK5RAP3-219ENST00000580670 SUPT6HQ7KZ85 1726 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PLEKHD1A6NEE1 506 aa21.24■□□□□ 0.99
CDK5RAP3-219ENST00000580670 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 ZCCHC11Q5TAX3 1644 aaKnown RBP21.23■□□□□ 0.99
CDK5RAP3-219ENST00000580670 NCOA2Q15596 1464 aa21.22■□□□□ 0.99
CDK5RAP3-219ENST00000580670 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.99
CDK5RAP3-219ENST00000580670 PHLDB1Q86UU1 1377 aa21.2■□□□□ 0.98
CDK5RAP3-219ENST00000580670 NPM1P06748 294 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDK5RAP3-219ENST00000580670 KIF14Q15058 1648 aa21.13■□□□□ 0.97
CDK5RAP3-219ENST00000580670 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
CDK5RAP3-219ENST00000580670 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
CDK5RAP3-219ENST00000580670 CCNB3Q8WWL7 1395 aa21.1■□□□□ 0.97
CDK5RAP3-219ENST00000580670 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
CDK5RAP3-219ENST00000580670 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
CDK5RAP3-219ENST00000580670 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
CDK5RAP3-219ENST00000580670 ABCC10Q5T3U5 1492 aa21.06■□□□□ 0.96
CDK5RAP3-219ENST00000580670 ASXL2Q76L83 1435 aa21.06■□□□□ 0.96
CDK5RAP3-219ENST00000580670 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-219ENST00000580670 GPATCH8Q9UKJ3 1502 aaKnown RBP21.03■□□□□ 0.96
CDK5RAP3-219ENST00000580670 MIA2Q96PC5 1412 aa21.02■□□□□ 0.95
CDK5RAP3-219ENST00000580670 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.01■□□□□ 0.953e-9■■□□□ 12.3
CDK5RAP3-219ENST00000580670 ITSN2Q9NZM3 1697 aa21.01■□□□□ 0.95
CDK5RAP3-219ENST00000580670 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
CDK5RAP3-219ENST00000580670 TTC37Q6PGP7 1564 aa20.99■□□□□ 0.95
CDK5RAP3-219ENST00000580670 CDC42BPAQ5VT25 1732 aa20.99■□□□□ 0.95
CDK5RAP3-219ENST00000580670 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
CDK5RAP3-219ENST00000580670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.95
CDK5RAP3-219ENST00000580670 MAPKBP1O60336 1514 aa20.97■□□□□ 0.95
CDK5RAP3-219ENST00000580670 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
CDK5RAP3-219ENST00000580670 ITGAEP38570 1179 aa20.95■□□□□ 0.94
CDK5RAP3-219ENST00000580670 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
CDK5RAP3-219ENST00000580670 PREX2Q70Z35 1606 aa20.93■□□□□ 0.94
CDK5RAP3-219ENST00000580670 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
CDK5RAP3-219ENST00000580670 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms