RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
TMCO1-207ENST00000580248 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
TMCO1-207ENST00000580248 FBLN2P98095 1184 aa27.13■■□□□ 1.93
TMCO1-207ENST00000580248 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
TMCO1-207ENST00000580248 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
TMCO1-207ENST00000580248 VPS8Q8N3P4 1428 aa27.05■■□□□ 1.92
TMCO1-207ENST00000580248 CHD1O14646 1710 aa27.03■■□□□ 1.92
TMCO1-207ENST00000580248 CTTNBP2Q8WZ74 1663 aa26.99■■□□□ 1.91
TMCO1-207ENST00000580248 NUP160Q12769 1436 aa26.98■■□□□ 1.91
TMCO1-207ENST00000580248 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
TMCO1-207ENST00000580248 KIAA0586Q9BVV6 1533 aa26.93■■□□□ 1.9
TMCO1-207ENST00000580248 IQGAP2Q13576 1575 aa26.88■■□□□ 1.89
TMCO1-207ENST00000580248 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
TMCO1-207ENST00000580248 APLP2Q06481 763 aa26.84■■□□□ 1.89
TMCO1-207ENST00000580248 ARAP1Q96P48 1450 aa26.82■■□□□ 1.88
TMCO1-207ENST00000580248 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
TMCO1-207ENST00000580248 UGGT2Q9NYU1 1516 aa26.76■■□□□ 1.88
TMCO1-207ENST00000580248 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
TMCO1-207ENST00000580248 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
TMCO1-207ENST00000580248 ARHGAP35Q9NRY4 1499 aa26.75■■□□□ 1.87
TMCO1-207ENST00000580248 EFCAB5A4FU69 1503 aa26.74■■□□□ 1.87
TMCO1-207ENST00000580248 SAMD9Q5K651 1589 aa26.7■■□□□ 1.87
TMCO1-207ENST00000580248 TTBK1Q5TCY1 1321 aaPredicted RBP26.7■■□□□ 1.86
TMCO1-207ENST00000580248 SHROOM2Q13796 1616 aa26.67■■□□□ 1.86
TMCO1-207ENST00000580248 P3H3Q8IVL6 736 aa26.66■■□□□ 1.86
TMCO1-207ENST00000580248 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
TMCO1-207ENST00000580248 CARMIL2Q6F5E8 1435 aa26.62■■□□□ 1.85
TMCO1-207ENST00000580248 PRG4Q92954 1404 aaPredicted RBP26.61■■□□□ 1.85
TMCO1-207ENST00000580248 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
TMCO1-207ENST00000580248 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
TMCO1-207ENST00000580248 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
TMCO1-207ENST00000580248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.54■■□□□ 1.84
TMCO1-207ENST00000580248 MAP3K1Q13233 1512 aa26.54■■□□□ 1.84
TMCO1-207ENST00000580248 FMN1Q68DA7 1419 aa26.51■■□□□ 1.83
TMCO1-207ENST00000580248 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
TMCO1-207ENST00000580248 PTPRGP23470 1445 aa26.41■■□□□ 1.82
TMCO1-207ENST00000580248 TIAM1Q13009 1591 aa26.39■■□□□ 1.81
TMCO1-207ENST00000580248 KANK4Q5T7N3 995 aaPredicted RBP26.39■■□□□ 1.81
TMCO1-207ENST00000580248 CASKIN1Q8WXD9 1431 aa26.39■■□□□ 1.81
TMCO1-207ENST00000580248 PCF11O94913 1555 aaKnown RBP26.36■■□□□ 1.81
TMCO1-207ENST00000580248 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
TMCO1-207ENST00000580248 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
TMCO1-207ENST00000580248 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
TMCO1-207ENST00000580248 ATP1B4Q9UN42 357 aaPredicted RBP26.31■■□□□ 1.8
TMCO1-207ENST00000580248 CFAP43Q8NDM7 1665 aa26.31■■□□□ 1.8
TMCO1-207ENST00000580248 PLB1Q6P1J6 1458 aa26.3■■□□□ 1.8
TMCO1-207ENST00000580248 ARHGEF11O15085 1522 aa26.3■■□□□ 1.8
TMCO1-207ENST00000580248 RAPGEF6Q8TEU7 1601 aa26.29■■□□□ 1.8
TMCO1-207ENST00000580248 ABCA8O94911 1581 aa26.28■■□□□ 1.8
TMCO1-207ENST00000580248 HECW1Q76N89 1606 aa26.26■■□□□ 1.79
TMCO1-207ENST00000580248 LRRC9Q6ZRR7 1453 aa26.25■■□□□ 1.79
TMCO1-207ENST00000580248 UACAQ9BZF9 1416 aa26.24■■□□□ 1.79
TMCO1-207ENST00000580248 NUP153P49790 1475 aaKnown RBP26.22■■□□□ 1.79
TMCO1-207ENST00000580248 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
TMCO1-207ENST00000580248 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
TMCO1-207ENST00000580248 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
TMCO1-207ENST00000580248 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
TMCO1-207ENST00000580248 EPRSP07814 1512 aaKnown RBP26.18■■□□□ 1.78
TMCO1-207ENST00000580248 LRRIQ1Q96JM4 1722 aa26.18■■□□□ 1.78
TMCO1-207ENST00000580248 CCDC18Q5T9S5 1454 aa26.18■■□□□ 1.78
TMCO1-207ENST00000580248 ABCC2Q92887 1545 aa26.16■■□□□ 1.78
TMCO1-207ENST00000580248 UHRF1BP1LA0JNW5 1464 aa26.16■■□□□ 1.78
TMCO1-207ENST00000580248 ARID3CA6NKF2 412 aa26.14■■□□□ 1.77
TMCO1-207ENST00000580248 CDK13Q14004 1512 aaKnown RBP26.12■■□□□ 1.77
TMCO1-207ENST00000580248 CLSPNQ9HAW4 1339 aa26.1■■□□□ 1.77
TMCO1-207ENST00000580248 ATP10BO94823 1461 aa26.09■■□□□ 1.77
TMCO1-207ENST00000580248 ADCY10Q96PN6 1610 aa26.08■■□□□ 1.77
TMCO1-207ENST00000580248 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
TMCO1-207ENST00000580248 KDM5BQ9UGL1 1544 aa26.04■■□□□ 1.76
TMCO1-207ENST00000580248 CDK11AQ9UQ88 783 aaPredicted RBP26.04■■□□□ 1.76
TMCO1-207ENST00000580248 MTUS2Q5JR59 1369 aa26.01■■□□□ 1.75
TMCO1-207ENST00000580248 PHLDB1Q86UU1 1377 aa26■■□□□ 1.75
TMCO1-207ENST00000580248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.99■■□□□ 1.75
TMCO1-207ENST00000580248 MAGI3Q5TCQ9 1506 aa25.99■■□□□ 1.75
TMCO1-207ENST00000580248 ZCCHC11Q5TAX3 1644 aaKnown RBP25.98■■□□□ 1.75
TMCO1-207ENST00000580248 PLEKHD1A6NEE1 506 aa25.97■■□□□ 1.75
TMCO1-207ENST00000580248 DNAJC5Q9H3Z4 198 aa25.97■■□□□ 1.75
TMCO1-207ENST00000580248 EHBP1L1Q8N3D4 1523 aa25.96■■□□□ 1.75
TMCO1-207ENST00000580248 DHX57Q6P158 1386 aaKnown RBP25.96■■□□□ 1.75
TMCO1-207ENST00000580248 NPM1P06748 294 aaKnown RBP eCLIP25.94■■□□□ 1.74
TMCO1-207ENST00000580248 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
TMCO1-207ENST00000580248 SUPT6HQ7KZ85 1726 aaKnown RBP25.86■■□□□ 1.73
TMCO1-207ENST00000580248 NCOA2Q15596 1464 aa25.84■■□□□ 1.73
TMCO1-207ENST00000580248 SETD5Q9C0A6 1442 aa25.83■■□□□ 1.73
TMCO1-207ENST00000580248 FGD6Q6ZV73 1430 aa25.82■■□□□ 1.72
TMCO1-207ENST00000580248 ASXL2Q76L83 1435 aa25.81■■□□□ 1.72
TMCO1-207ENST00000580248 ZNF316A6NFI3 1004 aaPredicted RBP25.8■■□□□ 1.72
TMCO1-207ENST00000580248 ITGAEP38570 1179 aa25.8■■□□□ 1.72
TMCO1-207ENST00000580248 FAM50AQ14320 339 aaKnown RBP25.8■■□□□ 1.72
TMCO1-207ENST00000580248 WDR7Q9Y4E6 1490 aa25.8■■□□□ 1.72
TMCO1-207ENST00000580248 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
TMCO1-207ENST00000580248 KIF14Q15058 1648 aa25.78■■□□□ 1.72
TMCO1-207ENST00000580248 KCNH8Q96L42 1107 aa25.77■■□□□ 1.72
TMCO1-207ENST00000580248 MAPKBP1O60336 1514 aa25.76■■□□□ 1.71
TMCO1-207ENST00000580248 MYOM3Q5VTT5 1437 aa25.75■■□□□ 1.71
TMCO1-207ENST00000580248 ABCC10Q5T3U5 1492 aa25.72■■□□□ 1.71
TMCO1-207ENST00000580248 DIEXFQ68CQ4 756 aaKnown RBP25.71■■□□□ 1.71
TMCO1-207ENST00000580248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.69■■□□□ 1.73e-8■■■□□ 16.7
TMCO1-207ENST00000580248 GPATCH8Q9UKJ3 1502 aaKnown RBP25.66■■□□□ 1.7
TMCO1-207ENST00000580248 TTC37Q6PGP7 1564 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms