RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
SNX11-206ENST00000580219 FAM69CQ0P6D2 419 aa16.69■□□□□ 0.26
SNX11-206ENST00000580219 ABCC10Q5T3U5 1492 aa16.67■□□□□ 0.26
SNX11-206ENST00000580219 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
SNX11-206ENST00000580219 DIP2BQ9P265 1576 aa16.67■□□□□ 0.26
SNX11-206ENST00000580219 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
SNX11-206ENST00000580219 CCDC88BA6NC98 1476 aa16.64■□□□□ 0.25
SNX11-206ENST00000580219 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
SNX11-206ENST00000580219 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
SNX11-206ENST00000580219 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
SNX11-206ENST00000580219 CEP170Q5SW79 1584 aa16.58■□□□□ 0.24
SNX11-206ENST00000580219 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
SNX11-206ENST00000580219 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
SNX11-206ENST00000580219 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
SNX11-206ENST00000580219 SOGA1O94964 1423 aa16.53■□□□□ 0.24
SNX11-206ENST00000580219 SPATA31D1Q6ZQQ2 1576 aa16.51■□□□□ 0.23
SNX11-206ENST00000580219 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
SNX11-206ENST00000580219 NCBP3Q53F19 620 aaKnown RBP16.44■□□□□ 0.22
SNX11-206ENST00000580219 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
SNX11-206ENST00000580219 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNX11-206ENST00000580219 HOXD11P31277 338 aaPredicted RBP16.39■□□□□ 0.21
SNX11-206ENST00000580219 PPRC1Q5VV67 1664 aaKnown RBP16.38■□□□□ 0.21
SNX11-206ENST00000580219 FGD5Q6ZNL6 1462 aa16.38■□□□□ 0.21
SNX11-206ENST00000580219 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
SNX11-206ENST00000580219 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
SNX11-206ENST00000580219 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
SNX11-206ENST00000580219 NUP160Q12769 1436 aa16.33■□□□□ 0.2
SNX11-206ENST00000580219 KCNA4P22459 653 aa16.32■□□□□ 0.2
SNX11-206ENST00000580219 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
SNX11-206ENST00000580219 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
SNX11-206ENST00000580219 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
SNX11-206ENST00000580219 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
SNX11-206ENST00000580219 CERKQ8TCT0 537 aa16.24■□□□□ 0.19
SNX11-206ENST00000580219 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
SNX11-206ENST00000580219 PCF11O94913 1555 aaKnown RBP16.2■□□□□ 0.18
SNX11-206ENST00000580219 CUX1P39880 1505 aa16.16■□□□□ 0.18
SNX11-206ENST00000580219 GLI2P10070 1586 aa16.16■□□□□ 0.18
SNX11-206ENST00000580219 KIF21BO75037 1637 aa16.16■□□□□ 0.18
SNX11-206ENST00000580219 PTPRMP28827 1452 aa16.11■□□□□ 0.17
SNX11-206ENST00000580219 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
SNX11-206ENST00000580219 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
SNX11-206ENST00000580219 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
SNX11-206ENST00000580219 MAP3K4Q9Y6R4 1608 aa16.08■□□□□ 0.17
SNX11-206ENST00000580219 TEX14Q8IWB6 1497 aa16.07■□□□□ 0.16
SNX11-206ENST00000580219 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
SNX11-206ENST00000580219 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
SNX11-206ENST00000580219 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
SNX11-206ENST00000580219 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
SNX11-206ENST00000580219 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
SNX11-206ENST00000580219 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
SNX11-206ENST00000580219 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.15
SNX11-206ENST00000580219 CUL7Q14999 1698 aa16.02■□□□□ 0.15
SNX11-206ENST00000580219 HSPA2P54652 639 aa15.98■□□□□ 0.15
SNX11-206ENST00000580219 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
SNX11-206ENST00000580219 EPRSP07814 1512 aaKnown RBP15.94■□□□□ 0.14
SNX11-206ENST00000580219 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
SNX11-206ENST00000580219 KIAA0586Q9BVV6 1533 aa15.92■□□□□ 0.14
SNX11-206ENST00000580219 EEA1Q15075 1411 aa15.92■□□□□ 0.14
SNX11-206ENST00000580219 BCORL1Q5H9F3 1711 aa15.89■□□□□ 0.13
SNX11-206ENST00000580219 ERICH3Q5RHP9 1530 aa15.88■□□□□ 0.13
SNX11-206ENST00000580219 RIMS1Q86UR5 1692 aaKnown RBP15.86■□□□□ 0.13
SNX11-206ENST00000580219 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
SNX11-206ENST00000580219 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
SNX11-206ENST00000580219 PTPRGP23470 1445 aa15.82■□□□□ 0.12
SNX11-206ENST00000580219 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
SNX11-206ENST00000580219 ZCCHC11Q5TAX3 1644 aaKnown RBP15.76■□□□□ 0.11
SNX11-206ENST00000580219 MED1Q15648 1581 aaPredicted RBP15.76■□□□□ 0.11
SNX11-206ENST00000580219 CFAP43Q8NDM7 1665 aa15.76■□□□□ 0.11
SNX11-206ENST00000580219 UHRF1BP1LA0JNW5 1464 aa15.75■□□□□ 0.11
SNX11-206ENST00000580219 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
SNX11-206ENST00000580219 STRCQ7RTU9 1775 aa15.74■□□□□ 0.11
SNX11-206ENST00000580219 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
SNX11-206ENST00000580219 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
SNX11-206ENST00000580219 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
SNX11-206ENST00000580219 CD109Q6YHK3 1445 aa15.69■□□□□ 0.1
SNX11-206ENST00000580219 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
SNX11-206ENST00000580219 ARID4BQ4LE39 1312 aaPredicted RBP15.68■□□□□ 0.1
SNX11-206ENST00000580219 IQSEC2Q5JU85 1478 aa15.68■□□□□ 0.1
SNX11-206ENST00000580219 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
SNX11-206ENST00000580219 WDR7Q9Y4E6 1490 aa15.67■□□□□ 0.1
SNX11-206ENST00000580219 ARAP3Q8WWN8 1544 aa15.66■□□□□ 0.1
SNX11-206ENST00000580219 YEATS2Q9ULM3 1422 aa15.66■□□□□ 0.1
SNX11-206ENST00000580219 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
SNX11-206ENST00000580219 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
SNX11-206ENST00000580219 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
SNX11-206ENST00000580219 IGF1RP08069 1367 aa15.62■□□□□ 0.09
SNX11-206ENST00000580219 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
SNX11-206ENST00000580219 CARMIL2Q6F5E8 1435 aa15.6■□□□□ 0.09
SNX11-206ENST00000580219 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
SNX11-206ENST00000580219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNX11-206ENST00000580219 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
SNX11-206ENST00000580219 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
SNX11-206ENST00000580219 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
SNX11-206ENST00000580219 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
SNX11-206ENST00000580219 PTPRTO14522 1441 aa15.53■□□□□ 0.08
SNX11-206ENST00000580219 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
SNX11-206ENST00000580219 ARHGEF40Q8TER5 1519 aa15.53■□□□□ 0.08
SNX11-206ENST00000580219 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
SNX11-206ENST00000580219 KCNH8Q96L42 1107 aa15.51■□□□□ 0.07
SNX11-206ENST00000580219 SRCAPQ6ZRS2 3230 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms