RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
RARA-209ENST00000579727 SHROOM2Q13796 1616 aa27.52■■■□□ 2
RARA-209ENST00000579727 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
RARA-209ENST00000579727 RAPGEF2Q9Y4G8 1499 aa27.47■■□□□ 1.99
RARA-209ENST00000579727 KIAA0586Q9BVV6 1533 aa27.41■■□□□ 1.98
RARA-209ENST00000579727 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
RARA-209ENST00000579727 PRG4Q92954 1404 aaPredicted RBP27.38■■□□□ 1.97
RARA-209ENST00000579727 JPH4Q96JJ6 628 aa27.37■■□□□ 1.97
RARA-209ENST00000579727 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
RARA-209ENST00000579727 IQGAP2Q13576 1575 aa27.34■■□□□ 1.97
RARA-209ENST00000579727 EEA1Q15075 1411 aa27.33■■□□□ 1.97
RARA-209ENST00000579727 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
RARA-209ENST00000579727 CTTNBP2Q8WZ74 1663 aa27.32■■□□□ 1.96
RARA-209ENST00000579727 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
RARA-209ENST00000579727 KIF21BO75037 1637 aa27.16■■□□□ 1.94
RARA-209ENST00000579727 UGGT2Q9NYU1 1516 aa27.14■■□□□ 1.94
RARA-209ENST00000579727 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
RARA-209ENST00000579727 TTBK1Q5TCY1 1321 aaPredicted RBP27.13■■□□□ 1.93
RARA-209ENST00000579727 EHMT2Q96KQ7 1210 aa27.12■■□□□ 1.93
RARA-209ENST00000579727 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
RARA-209ENST00000579727 KIAA0556O60303 1618 aa27.1■■□□□ 1.93
RARA-209ENST00000579727 TNIKQ9UKE5 1360 aa27.04■■□□□ 1.92
RARA-209ENST00000579727 ADCY10Q96PN6 1610 aa27.02■■□□□ 1.92
RARA-209ENST00000579727 PTPRGP23470 1445 aa27.01■■□□□ 1.91
RARA-209ENST00000579727 GOLGA3Q08378 1498 aa26.98■■□□□ 1.91
RARA-209ENST00000579727 RANGAP1P46060 587 aaPredicted RBP26.97■■□□□ 1.91
RARA-209ENST00000579727 SAMD9Q5K651 1589 aa26.92■■□□□ 1.9
RARA-209ENST00000579727 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
RARA-209ENST00000579727 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
RARA-209ENST00000579727 ABCC10Q5T3U5 1492 aa26.87■■□□□ 1.89
RARA-209ENST00000579727 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
RARA-209ENST00000579727 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
RARA-209ENST00000579727 KDM4FA0A1W2PPD8 638 aa26.85■■□□□ 1.89
RARA-209ENST00000579727 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
RARA-209ENST00000579727 TSPOAP1O95153 1857 aa26.84■■□□□ 1.89
RARA-209ENST00000579727 ABCC2Q92887 1545 aa26.84■■□□□ 1.89
RARA-209ENST00000579727 NPM1P06748 294 aaKnown RBP eCLIP26.82■■□□□ 1.88
RARA-209ENST00000579727 PLB1Q6P1J6 1458 aa26.81■■□□□ 1.88
RARA-209ENST00000579727 MAPKBP1O60336 1514 aa26.81■■□□□ 1.88
RARA-209ENST00000579727 KDM6BO15054 1643 aa26.81■■□□□ 1.88
RARA-209ENST00000579727 ILDR1Q86SU0 546 aaPredicted RBP26.8■■□□□ 1.88
RARA-209ENST00000579727 UHRF1BP1LA0JNW5 1464 aa26.8■■□□□ 1.88
RARA-209ENST00000579727 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
RARA-209ENST00000579727 ABCA8O94911 1581 aa26.77■■□□□ 1.88
RARA-209ENST00000579727 EFCAB5A4FU69 1503 aa26.75■■□□□ 1.87
RARA-209ENST00000579727 ZCCHC11Q5TAX3 1644 aaKnown RBP26.75■■□□□ 1.87
RARA-209ENST00000579727 KDM5BQ9UGL1 1544 aa26.69■■□□□ 1.86
RARA-209ENST00000579727 RAPGEF6Q8TEU7 1601 aa26.67■■□□□ 1.86
RARA-209ENST00000579727 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
RARA-209ENST00000579727 ASXL2Q76L83 1435 aa26.65■■□□□ 1.86
RARA-209ENST00000579727 ARID3CA6NKF2 412 aa26.63■■□□□ 1.85
RARA-209ENST00000579727 PPRC1Q5VV67 1664 aaKnown RBP26.54■■□□□ 1.84
RARA-209ENST00000579727 NUP153P49790 1475 aaKnown RBP26.54■■□□□ 1.84
RARA-209ENST00000579727 ATP10BO94823 1461 aa26.52■■□□□ 1.84
RARA-209ENST00000579727 WDR7Q9Y4E6 1490 aa26.5■■□□□ 1.83
RARA-209ENST00000579727 CLIP1P30622 1438 aa26.49■■□□□ 1.83
RARA-209ENST00000579727 LOC105371045A0A1W2PR82 267 aa26.49■■□□□ 1.83
RARA-209ENST00000579727 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
RARA-209ENST00000579727 ADGRL1O94910 1474 aa26.47■■□□□ 1.83
RARA-209ENST00000579727 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
RARA-209ENST00000579727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.45■■□□□ 1.82
RARA-209ENST00000579727 HNRNPUL2Q1KMD3 747 aaKnown RBP26.45■■□□□ 1.82
RARA-209ENST00000579727 GLI2P10070 1586 aa26.45■■□□□ 1.82
RARA-209ENST00000579727 HECW1Q76N89 1606 aa26.43■■□□□ 1.82
RARA-209ENST00000579727 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
RARA-209ENST00000579727 CDK13Q14004 1512 aaKnown RBP26.42■■□□□ 1.82
RARA-209ENST00000579727 PCF11O94913 1555 aaKnown RBP26.41■■□□□ 1.82
RARA-209ENST00000579727 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
RARA-209ENST00000579727 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
RARA-209ENST00000579727 MAP3K4Q9Y6R4 1608 aa26.39■■□□□ 1.82
RARA-209ENST00000579727 HECW2Q9P2P5 1572 aa26.39■■□□□ 1.82
RARA-209ENST00000579727 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.81
RARA-209ENST00000579727 CFAP43Q8NDM7 1665 aa26.32■■□□□ 1.8
RARA-209ENST00000579727 COL17A1Q9UMD9 1497 aaPredicted RBP26.32■■□□□ 1.8
RARA-209ENST00000579727 CASKIN1Q8WXD9 1431 aa26.29■■□□□ 1.8
RARA-209ENST00000579727 ABCA9Q8IUA7 1624 aa26.25■■□□□ 1.79
RARA-209ENST00000579727 FYCO1Q9BQS8 1478 aa26.25■■□□□ 1.79
RARA-209ENST00000579727 CD109Q6YHK3 1445 aa26.24■■□□□ 1.79
RARA-209ENST00000579727 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
RARA-209ENST00000579727 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
RARA-209ENST00000579727 CCDC18Q5T9S5 1454 aa26.18■■□□□ 1.78
RARA-209ENST00000579727 TTC37Q6PGP7 1564 aa26.18■■□□□ 1.78
RARA-209ENST00000579727 MAGI3Q5TCQ9 1506 aa26.17■■□□□ 1.78
RARA-209ENST00000579727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.17■■□□□ 1.78
RARA-209ENST00000579727 KIF14Q15058 1648 aa26.15■■□□□ 1.78
RARA-209ENST00000579727 CDK11AQ9UQ88 783 aaPredicted RBP26.11■■□□□ 1.77
RARA-209ENST00000579727 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
RARA-209ENST00000579727 VPS8Q8N3P4 1428 aa26.05■■□□□ 1.76
RARA-209ENST00000579727 MYO5CQ9NQX4 1742 aa26.04■■□□□ 1.76
RARA-209ENST00000579727 NEO1Q92859 1461 aa25.98■■□□□ 1.75
RARA-209ENST00000579727 CFAP74Q9C0B2 1584 aa25.97■■□□□ 1.75
RARA-209ENST00000579727 FANCAO15360 1455 aa25.97■■□□□ 1.75
RARA-209ENST00000579727 PLCH2O75038 1416 aa25.94■■□□□ 1.74
RARA-209ENST00000579727 TIAM1Q13009 1591 aa25.94■■□□□ 1.74
RARA-209ENST00000579727 MTUS2Q5JR59 1369 aa25.94■■□□□ 1.74
RARA-209ENST00000579727 ARAP3Q8WWN8 1544 aa25.93■■□□□ 1.74
RARA-209ENST00000579727 FBXO41Q8TF61 875 aa25.93■■□□□ 1.74
RARA-209ENST00000579727 CDC42BPBQ9Y5S2 1711 aa25.92■■□□□ 1.74
RARA-209ENST00000579727 EHBP1L1Q8N3D4 1523 aa25.92■■□□□ 1.74
RARA-209ENST00000579727 PREX2Q70Z35 1606 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms