RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
CDK5RAP3-214ENST00000579632 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
CDK5RAP3-214ENST00000579632 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
CDK5RAP3-214ENST00000579632 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
CDK5RAP3-214ENST00000579632 CLIP1P30622 1438 aa16.83■□□□□ 0.28
CDK5RAP3-214ENST00000579632 RANGAP1P46060 587 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-214ENST00000579632 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
CDK5RAP3-214ENST00000579632 CHD1O14646 1710 aa16.82■□□□□ 0.28
CDK5RAP3-214ENST00000579632 UGGT2Q9NYU1 1516 aa16.79■□□□□ 0.28
CDK5RAP3-214ENST00000579632 CLASP1Q7Z460 1538 aa16.78■□□□□ 0.28
CDK5RAP3-214ENST00000579632 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
CDK5RAP3-214ENST00000579632 CARMIL2Q6F5E8 1435 aa16.77■□□□□ 0.27
CDK5RAP3-214ENST00000579632 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
CDK5RAP3-214ENST00000579632 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
CDK5RAP3-214ENST00000579632 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-214ENST00000579632 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
CDK5RAP3-214ENST00000579632 DISP1Q96F81 1524 aa16.71■□□□□ 0.27
CDK5RAP3-214ENST00000579632 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
CDK5RAP3-214ENST00000579632 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
CDK5RAP3-214ENST00000579632 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
CDK5RAP3-214ENST00000579632 FHOD3Q2V2M9 1422 aa16.67■□□□□ 0.26
CDK5RAP3-214ENST00000579632 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
CDK5RAP3-214ENST00000579632 KIAA0556O60303 1618 aa16.64■□□□□ 0.25
CDK5RAP3-214ENST00000579632 PTPRGP23470 1445 aa16.63■□□□□ 0.25
CDK5RAP3-214ENST00000579632 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
CDK5RAP3-214ENST00000579632 TTBK1Q5TCY1 1321 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-214ENST00000579632 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
CDK5RAP3-214ENST00000579632 CASKIN1Q8WXD9 1431 aa16.55■□□□□ 0.24
CDK5RAP3-214ENST00000579632 APLP2Q06481 763 aa16.53■□□□□ 0.24
CDK5RAP3-214ENST00000579632 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
CDK5RAP3-214ENST00000579632 ATP1B4Q9UN42 357 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-214ENST00000579632 FYCO1Q9BQS8 1478 aa16.52■□□□□ 0.23
CDK5RAP3-214ENST00000579632 UACAQ9BZF9 1416 aa16.52■□□□□ 0.23
CDK5RAP3-214ENST00000579632 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
CDK5RAP3-214ENST00000579632 DNAJC5Q9H3Z4 198 aa16.46■□□□□ 0.23
CDK5RAP3-214ENST00000579632 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.23
CDK5RAP3-214ENST00000579632 ABCA8O94911 1581 aa16.46■□□□□ 0.23
CDK5RAP3-214ENST00000579632 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
CDK5RAP3-214ENST00000579632 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-214ENST00000579632 NUP153P49790 1475 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-214ENST00000579632 MAP3K1Q13233 1512 aa16.43■□□□□ 0.22
CDK5RAP3-214ENST00000579632 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
CDK5RAP3-214ENST00000579632 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
CDK5RAP3-214ENST00000579632 ABCC2Q92887 1545 aa16.42■□□□□ 0.22
CDK5RAP3-214ENST00000579632 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-214ENST00000579632 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
CDK5RAP3-214ENST00000579632 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
CDK5RAP3-214ENST00000579632 HECW1Q76N89 1606 aa16.41■□□□□ 0.22
CDK5RAP3-214ENST00000579632 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
CDK5RAP3-214ENST00000579632 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-214ENST00000579632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-214ENST00000579632 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-214ENST00000579632 ARID3CA6NKF2 412 aa16.39■□□□□ 0.21
CDK5RAP3-214ENST00000579632 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDK5RAP3-214ENST00000579632 ATP10BO94823 1461 aa16.38■□□□□ 0.21
CDK5RAP3-214ENST00000579632 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
CDK5RAP3-214ENST00000579632 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
CDK5RAP3-214ENST00000579632 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-214ENST00000579632 MTUS2Q5JR59 1369 aa16.34■□□□□ 0.21
CDK5RAP3-214ENST00000579632 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
CDK5RAP3-214ENST00000579632 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP3-214ENST00000579632 LRRC9Q6ZRR7 1453 aa16.32■□□□□ 0.2
CDK5RAP3-214ENST00000579632 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CDK5RAP3-214ENST00000579632 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-214ENST00000579632 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-214ENST00000579632 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
CDK5RAP3-214ENST00000579632 CFAP43Q8NDM7 1665 aa16.24■□□□□ 0.19
CDK5RAP3-214ENST00000579632 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
CDK5RAP3-214ENST00000579632 ZCCHC11Q5TAX3 1644 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-214ENST00000579632 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
CDK5RAP3-214ENST00000579632 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
CDK5RAP3-214ENST00000579632 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
CDK5RAP3-214ENST00000579632 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
CDK5RAP3-214ENST00000579632 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
CDK5RAP3-214ENST00000579632 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
CDK5RAP3-214ENST00000579632 CCNB3Q8WWL7 1395 aa16.15■□□□□ 0.18
CDK5RAP3-214ENST00000579632 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
CDK5RAP3-214ENST00000579632 KIF14Q15058 1648 aa16.13■□□□□ 0.17
CDK5RAP3-214ENST00000579632 ABCC10Q5T3U5 1492 aa16.12■□□□□ 0.17
CDK5RAP3-214ENST00000579632 SUPT6HQ7KZ85 1726 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-214ENST00000579632 MYOM3Q5VTT5 1437 aa16.11■□□□□ 0.17
CDK5RAP3-214ENST00000579632 CFDP1Q9UEE9 299 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-214ENST00000579632 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
CDK5RAP3-214ENST00000579632 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-214ENST00000579632 GPATCH8Q9UKJ3 1502 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-214ENST00000579632 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.09■□□□□ 0.17
CDK5RAP3-214ENST00000579632 FAM69CQ0P6D2 419 aa16.08■□□□□ 0.16
CDK5RAP3-214ENST00000579632 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-214ENST00000579632 PLCH2O75038 1416 aa16.07■□□□□ 0.16
CDK5RAP3-214ENST00000579632 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
CDK5RAP3-214ENST00000579632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDK5RAP3-214ENST00000579632 EFCAB2Q5VUJ9 269 aa16.06■□□□□ 0.16
CDK5RAP3-214ENST00000579632 CD109Q6YHK3 1445 aa16.05■□□□□ 0.16
CDK5RAP3-214ENST00000579632 GLI2P10070 1586 aa16.03■□□□□ 0.16
CDK5RAP3-214ENST00000579632 ABCA9Q8IUA7 1624 aa16.02■□□□□ 0.16
CDK5RAP3-214ENST00000579632 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-214ENST00000579632 ARAP3Q8WWN8 1544 aa16.02■□□□□ 0.15
CDK5RAP3-214ENST00000579632 TTC37Q6PGP7 1564 aa16.01■□□□□ 0.15
CDK5RAP3-214ENST00000579632 ZNF777Q9ULD5 760 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-214ENST00000579632 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms