RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 CTTNBP2Q8WZ74 1663 aa22.37■■□□□ 1.17
TSEN54-206ENST00000579449 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
TSEN54-206ENST00000579449 NUP160Q12769 1436 aa22.28■■□□□ 1.16
TSEN54-206ENST00000579449 CEP162Q5TB80 1403 aa22.28■■□□□ 1.16
TSEN54-206ENST00000579449 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
TSEN54-206ENST00000579449 KIAA0586Q9BVV6 1533 aa22.24■■□□□ 1.15
TSEN54-206ENST00000579449 IQGAP2Q13576 1575 aa22.23■■□□□ 1.15
TSEN54-206ENST00000579449 CLIP1P30622 1438 aa22.21■■□□□ 1.15
TSEN54-206ENST00000579449 ARHGAP35Q9NRY4 1499 aa22.13■■□□□ 1.13
TSEN54-206ENST00000579449 UGGT2Q9NYU1 1516 aa22.12■■□□□ 1.13
TSEN54-206ENST00000579449 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
TSEN54-206ENST00000579449 EFCAB5A4FU69 1503 aa22.1■■□□□ 1.13
TSEN54-206ENST00000579449 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
TSEN54-206ENST00000579449 SAMD9Q5K651 1589 aa22.08■■□□□ 1.13
TSEN54-206ENST00000579449 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
TSEN54-206ENST00000579449 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
TSEN54-206ENST00000579449 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
TSEN54-206ENST00000579449 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
TSEN54-206ENST00000579449 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
TSEN54-206ENST00000579449 KIAA0556O60303 1618 aa22.02■■□□□ 1.11
TSEN54-206ENST00000579449 FHOD3Q2V2M9 1422 aa22.01■■□□□ 1.11
TSEN54-206ENST00000579449 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
TSEN54-206ENST00000579449 CARMIL2Q6F5E8 1435 aa21.97■■□□□ 1.11
TSEN54-206ENST00000579449 VPS8Q8N3P4 1428 aa21.96■■□□□ 1.11
TSEN54-206ENST00000579449 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
TSEN54-206ENST00000579449 FMN1Q68DA7 1419 aa21.89■■□□□ 1.09
TSEN54-206ENST00000579449 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
TSEN54-206ENST00000579449 PCF11O94913 1555 aaKnown RBP21.83■■□□□ 1.09
TSEN54-206ENST00000579449 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
TSEN54-206ENST00000579449 PTPRGP23470 1445 aa21.8■■□□□ 1.08
TSEN54-206ENST00000579449 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
TSEN54-206ENST00000579449 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
TSEN54-206ENST00000579449 RAPGEF6Q8TEU7 1601 aa21.76■■□□□ 1.07
TSEN54-206ENST00000579449 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
TSEN54-206ENST00000579449 ABCA8O94911 1581 aa21.73■■□□□ 1.07
TSEN54-206ENST00000579449 HECW1Q76N89 1606 aa21.73■■□□□ 1.07
TSEN54-206ENST00000579449 APLP2Q06481 763 aa21.72■■□□□ 1.07
TSEN54-206ENST00000579449 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
TSEN54-206ENST00000579449 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
TSEN54-206ENST00000579449 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
TSEN54-206ENST00000579449 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
TSEN54-206ENST00000579449 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
TSEN54-206ENST00000579449 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
TSEN54-206ENST00000579449 NUP153P49790 1475 aaKnown RBP21.66■■□□□ 1.06
TSEN54-206ENST00000579449 CFAP43Q8NDM7 1665 aa21.66■■□□□ 1.06
TSEN54-206ENST00000579449 TIAM1Q13009 1591 aa21.65■■□□□ 1.06
TSEN54-206ENST00000579449 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
TSEN54-206ENST00000579449 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
TSEN54-206ENST00000579449 EPRSP07814 1512 aaKnown RBP21.64■■□□□ 1.05
TSEN54-206ENST00000579449 CCDC18Q5T9S5 1454 aa21.63■■□□□ 1.05
TSEN54-206ENST00000579449 ABCC2Q92887 1545 aa21.62■■□□□ 1.05
TSEN54-206ENST00000579449 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
TSEN54-206ENST00000579449 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
TSEN54-206ENST00000579449 UHRF1BP1LA0JNW5 1464 aa21.59■■□□□ 1.05
TSEN54-206ENST00000579449 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
TSEN54-206ENST00000579449 ADCY10Q96PN6 1610 aa21.57■■□□□ 1.04
TSEN54-206ENST00000579449 ATP10BO94823 1461 aa21.57■■□□□ 1.04
TSEN54-206ENST00000579449 LRRC9Q6ZRR7 1453 aa21.55■■□□□ 1.04
TSEN54-206ENST00000579449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
TSEN54-206ENST00000579449 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
TSEN54-206ENST00000579449 MAGI3Q5TCQ9 1506 aa21.5■■□□□ 1.03
TSEN54-206ENST00000579449 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
TSEN54-206ENST00000579449 ZCCHC11Q5TAX3 1644 aaKnown RBP21.5■■□□□ 1.03
TSEN54-206ENST00000579449 KDM5BQ9UGL1 1544 aa21.5■■□□□ 1.03
TSEN54-206ENST00000579449 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
TSEN54-206ENST00000579449 EHBP1L1Q8N3D4 1523 aa21.48■■□□□ 1.03
TSEN54-206ENST00000579449 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
TSEN54-206ENST00000579449 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
TSEN54-206ENST00000579449 TROQ12816 1431 aaPredicted RBP21.42■■□□□ 1.02
TSEN54-206ENST00000579449 SUPT6HQ7KZ85 1726 aaKnown RBP21.41■■□□□ 1.02
TSEN54-206ENST00000579449 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
TSEN54-206ENST00000579449 NPM1P06748 294 aaKnown RBP eCLIP21.39■■□□□ 1.01
TSEN54-206ENST00000579449 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
TSEN54-206ENST00000579449 NCOA2Q15596 1464 aa21.36■■□□□ 1.01
TSEN54-206ENST00000579449 KIF14Q15058 1648 aa21.34■■□□□ 1.01
TSEN54-206ENST00000579449 PHLDB1Q86UU1 1377 aa21.33■■□□□ 1
TSEN54-206ENST00000579449 ASXL2Q76L83 1435 aa21.31■■□□□ 1
TSEN54-206ENST00000579449 WDR7Q9Y4E6 1490 aa21.31■■□□□ 1
TSEN54-206ENST00000579449 TRIM26Q12899 539 aaPredicted RBP21.3■■□□□ 1
TSEN54-206ENST00000579449 KCNH8Q96L42 1107 aa21.28■■□□□ 1
TSEN54-206ENST00000579449 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
TSEN54-206ENST00000579449 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
TSEN54-206ENST00000579449 MYOM3Q5VTT5 1437 aa21.25■□□□□ 0.99
TSEN54-206ENST00000579449 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
TSEN54-206ENST00000579449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.24■□□□□ 0.99
TSEN54-206ENST00000579449 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
TSEN54-206ENST00000579449 TTC37Q6PGP7 1564 aa21.22■□□□□ 0.99
TSEN54-206ENST00000579449 CDC42BPAQ5VT25 1732 aa21.21■□□□□ 0.99
TSEN54-206ENST00000579449 ITSN2Q9NZM3 1697 aa21.21■□□□□ 0.99
TSEN54-206ENST00000579449 FGD6Q6ZV73 1430 aa21.21■□□□□ 0.99
TSEN54-206ENST00000579449 GPATCH8Q9UKJ3 1502 aaKnown RBP21.2■□□□□ 0.98
TSEN54-206ENST00000579449 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
TSEN54-206ENST00000579449 ABCA9Q8IUA7 1624 aa21.16■□□□□ 0.98
TSEN54-206ENST00000579449 PTPN23Q9H3S7 1636 aa21.16■□□□□ 0.98
TSEN54-206ENST00000579449 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
TSEN54-206ENST00000579449 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
TSEN54-206ENST00000579449 CDC42BPBQ9Y5S2 1711 aa21.15■□□□□ 0.98
TSEN54-206ENST00000579449 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
TSEN54-206ENST00000579449 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
TSEN54-206ENST00000579449 CFDP1Q9UEE9 299 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms