RNA–Protein interactions for RNA: ENST00000579214.1

TTC39C-206, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-206ENST00000579214 CTTNBP2Q8WZ74 1663 aa15.72■□□□□ 0.11
TTC39C-206ENST00000579214 NUP160Q12769 1436 aa15.71■□□□□ 0.11
TTC39C-206ENST00000579214 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
TTC39C-206ENST00000579214 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
TTC39C-206ENST00000579214 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
TTC39C-206ENST00000579214 TNIKQ9UKE5 1360 aa15.67■□□□□ 0.1
TTC39C-206ENST00000579214 KIAA0586Q9BVV6 1533 aa15.66■□□□□ 0.1
TTC39C-206ENST00000579214 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
TTC39C-206ENST00000579214 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
TTC39C-206ENST00000579214 JPH4Q96JJ6 628 aa15.57■□□□□ 0.08
TTC39C-206ENST00000579214 CLIP1P30622 1438 aa15.57■□□□□ 0.08
TTC39C-206ENST00000579214 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
TTC39C-206ENST00000579214 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
TTC39C-206ENST00000579214 PRG4Q92954 1404 aaPredicted RBP15.54■□□□□ 0.08
TTC39C-206ENST00000579214 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
TTC39C-206ENST00000579214 TTBK1Q5TCY1 1321 aaPredicted RBP15.53■□□□□ 0.08
TTC39C-206ENST00000579214 CARMIL2Q6F5E8 1435 aa15.52■□□□□ 0.08
TTC39C-206ENST00000579214 EFCAB5A4FU69 1503 aa15.52■□□□□ 0.07
TTC39C-206ENST00000579214 KIAA0556O60303 1618 aa15.51■□□□□ 0.07
TTC39C-206ENST00000579214 ARHGAP35Q9NRY4 1499 aa15.5■□□□□ 0.07
TTC39C-206ENST00000579214 FHOD3Q2V2M9 1422 aa15.5■□□□□ 0.07
TTC39C-206ENST00000579214 SAMD9Q5K651 1589 aa15.49■□□□□ 0.07
TTC39C-206ENST00000579214 DISP1Q96F81 1524 aa15.49■□□□□ 0.07
TTC39C-206ENST00000579214 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
TTC39C-206ENST00000579214 ARAP1Q96P48 1450 aa15.45■□□□□ 0.06
TTC39C-206ENST00000579214 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
TTC39C-206ENST00000579214 RIMBP3CA6NJZ7 1639 aa15.4■□□□□ 0.06
TTC39C-206ENST00000579214 RIMBP3BA6NNM3 1639 aa15.4■□□□□ 0.06
TTC39C-206ENST00000579214 RIMBP3Q9UFD9 1639 aa15.4■□□□□ 0.06
TTC39C-206ENST00000579214 PTPRGP23470 1445 aa15.4■□□□□ 0.06
TTC39C-206ENST00000579214 FMN1Q68DA7 1419 aa15.37■□□□□ 0.05
TTC39C-206ENST00000579214 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
TTC39C-206ENST00000579214 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
TTC39C-206ENST00000579214 PCF11O94913 1555 aaKnown RBP15.34■□□□□ 0.05
TTC39C-206ENST00000579214 PLB1Q6P1J6 1458 aa15.33■□□□□ 0.04
TTC39C-206ENST00000579214 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
TTC39C-206ENST00000579214 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
TTC39C-206ENST00000579214 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
TTC39C-206ENST00000579214 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
TTC39C-206ENST00000579214 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
TTC39C-206ENST00000579214 HECW1Q76N89 1606 aa15.29■□□□□ 0.04
TTC39C-206ENST00000579214 ABCA8O94911 1581 aa15.29■□□□□ 0.04
TTC39C-206ENST00000579214 FYCO1Q9BQS8 1478 aa15.28■□□□□ 0.04
TTC39C-206ENST00000579214 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
TTC39C-206ENST00000579214 ABCC2Q92887 1545 aa15.27■□□□□ 0.03
TTC39C-206ENST00000579214 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
TTC39C-206ENST00000579214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
TTC39C-206ENST00000579214 APLP2Q06481 763 aa15.25■□□□□ 0.03
TTC39C-206ENST00000579214 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
TTC39C-206ENST00000579214 NUP153P49790 1475 aaKnown RBP15.24■□□□□ 0.03
TTC39C-206ENST00000579214 ADCY10Q96PN6 1610 aa15.24■□□□□ 0.03
TTC39C-206ENST00000579214 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
TTC39C-206ENST00000579214 UHRF1BP1LA0JNW5 1464 aa15.22■□□□□ 0.03
TTC39C-206ENST00000579214 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
TTC39C-206ENST00000579214 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
TTC39C-206ENST00000579214 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
TTC39C-206ENST00000579214 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
TTC39C-206ENST00000579214 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
TTC39C-206ENST00000579214 ZCCHC11Q5TAX3 1644 aaKnown RBP15.17■□□□□ 0.02
TTC39C-206ENST00000579214 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
TTC39C-206ENST00000579214 ATP10BO94823 1461 aa15.17■□□□□ 0.02
TTC39C-206ENST00000579214 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
TTC39C-206ENST00000579214 KDM5BQ9UGL1 1544 aa15.15■□□□□ 0.02
TTC39C-206ENST00000579214 PPARGC1BQ86YN6 1023 aaKnown RBP15.14■□□□□ 0.01
TTC39C-206ENST00000579214 CDK11AQ9UQ88 783 aaPredicted RBP15.13■□□□□ 0.01
TTC39C-206ENST00000579214 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
TTC39C-206ENST00000579214 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
TTC39C-206ENST00000579214 PLEKHD1A6NEE1 506 aa15.1■□□□□ 0.01
TTC39C-206ENST00000579214 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
TTC39C-206ENST00000579214 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
TTC39C-206ENST00000579214 ASXL2Q76L83 1435 aa15.09■□□□□ 0.01
TTC39C-206ENST00000579214 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0
TTC39C-206ENST00000579214 MAGI3Q5TCQ9 1506 aa15.07■□□□□ 0
TTC39C-206ENST00000579214 TROQ12816 1431 aaPredicted RBP15.07■□□□□ 0
TTC39C-206ENST00000579214 WDR7Q9Y4E6 1490 aa15.07■□□□□ 0
TTC39C-206ENST00000579214 KCNH8Q96L42 1107 aa15.06■□□□□ 0
TTC39C-206ENST00000579214 KIF14Q15058 1648 aa15.04■□□□□ -0
TTC39C-206ENST00000579214 MAPKBP1O60336 1514 aa15.03■□□□□ -0
TTC39C-206ENST00000579214 SUPT6HQ7KZ85 1726 aaKnown RBP15.03■□□□□ -0
TTC39C-206ENST00000579214 NCOA2Q15596 1464 aa14.99□□□□□ -0.01
TTC39C-206ENST00000579214 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
TTC39C-206ENST00000579214 CCNB3Q8WWL7 1395 aa14.97□□□□□ -0.01
TTC39C-206ENST00000579214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.95□□□□□ -0.02
TTC39C-206ENST00000579214 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
TTC39C-206ENST00000579214 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
TTC39C-206ENST00000579214 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
TTC39C-206ENST00000579214 ABCC10Q5T3U5 1492 aa14.93□□□□□ -0.02
TTC39C-206ENST00000579214 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
TTC39C-206ENST00000579214 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
TTC39C-206ENST00000579214 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
TTC39C-206ENST00000579214 MYOM3Q5VTT5 1437 aa14.91□□□□□ -0.02
TTC39C-206ENST00000579214 ITSN2Q9NZM3 1697 aa14.9□□□□□ -0.02
TTC39C-206ENST00000579214 CDC42BPAQ5VT25 1732 aa14.89□□□□□ -0.03
TTC39C-206ENST00000579214 ARHGAP5Q13017 1502 aa14.89□□□□□ -0.03
TTC39C-206ENST00000579214 CD109Q6YHK3 1445 aa14.89□□□□□ -0.03
TTC39C-206ENST00000579214 GLI2P10070 1586 aa14.89□□□□□ -0.03
TTC39C-206ENST00000579214 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
TTC39C-206ENST00000579214 KIF13AQ9H1H9 1805 aa14.88□□□□□ -0.03
TTC39C-206ENST00000579214 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
TTC39C-206ENST00000579214 CFDP1Q9UEE9 299 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms