RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 KIAA0586Q9BVV6 1533 aa22.58■■□□□ 1.21
CSNK1D-209ENST00000578904 EHMT2Q96KQ7 1210 aa22.58■■□□□ 1.21
CSNK1D-209ENST00000578904 CTTNBP2Q8WZ74 1663 aa22.58■■□□□ 1.2
CSNK1D-209ENST00000578904 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
CSNK1D-209ENST00000578904 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
CSNK1D-209ENST00000578904 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-209ENST00000578904 RIMBP3CA6NJZ7 1639 aa22.46■■□□□ 1.19
CSNK1D-209ENST00000578904 RIMBP3BA6NNM3 1639 aa22.46■■□□□ 1.19
CSNK1D-209ENST00000578904 RIMBP3Q9UFD9 1639 aa22.46■■□□□ 1.19
CSNK1D-209ENST00000578904 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
CSNK1D-209ENST00000578904 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
CSNK1D-209ENST00000578904 ARHGEF11O15085 1522 aa22.43■■□□□ 1.18
CSNK1D-209ENST00000578904 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
CSNK1D-209ENST00000578904 PRG4Q92954 1404 aaPredicted RBP22.41■■□□□ 1.18
CSNK1D-209ENST00000578904 ERCC6L2Q5T890 1561 aa22.38■■□□□ 1.17
CSNK1D-209ENST00000578904 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
CSNK1D-209ENST00000578904 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
CSNK1D-209ENST00000578904 DISP1Q96F81 1524 aa22.33■■□□□ 1.17
CSNK1D-209ENST00000578904 KIAA0556O60303 1618 aa22.33■■□□□ 1.17
CSNK1D-209ENST00000578904 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.17
CSNK1D-209ENST00000578904 CYB5RLQ6IPT4 315 aa22.33■■□□□ 1.17
CSNK1D-209ENST00000578904 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
CSNK1D-209ENST00000578904 SAMD9Q5K651 1589 aa22.29■■□□□ 1.16
CSNK1D-209ENST00000578904 EFCAB5A4FU69 1503 aa22.28■■□□□ 1.16
CSNK1D-209ENST00000578904 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
CSNK1D-209ENST00000578904 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
CSNK1D-209ENST00000578904 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
CSNK1D-209ENST00000578904 CLIP1P30622 1438 aa22.2■■□□□ 1.14
CSNK1D-209ENST00000578904 PTPRGP23470 1445 aa22.19■■□□□ 1.14
CSNK1D-209ENST00000578904 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
CSNK1D-209ENST00000578904 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
CSNK1D-209ENST00000578904 ARHGAP35Q9NRY4 1499 aa22.19■■□□□ 1.14
CSNK1D-209ENST00000578904 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
CSNK1D-209ENST00000578904 UACAQ9BZF9 1416 aa22.06■■□□□ 1.12
CSNK1D-209ENST00000578904 PLB1Q6P1J6 1458 aa22.05■■□□□ 1.12
CSNK1D-209ENST00000578904 FMN1Q68DA7 1419 aa22.05■■□□□ 1.12
CSNK1D-209ENST00000578904 ADCY10Q96PN6 1610 aa22.04■■□□□ 1.12
CSNK1D-209ENST00000578904 ABCA8O94911 1581 aa22.04■■□□□ 1.12
CSNK1D-209ENST00000578904 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
CSNK1D-209ENST00000578904 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.12
CSNK1D-209ENST00000578904 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.11
CSNK1D-209ENST00000578904 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.11
CSNK1D-209ENST00000578904 HECW1Q76N89 1606 aa21.94■■□□□ 1.1
CSNK1D-209ENST00000578904 NUP153P49790 1475 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-209ENST00000578904 NPM1P06748 294 aaKnown RBP eCLIP21.91■■□□□ 1.1
CSNK1D-209ENST00000578904 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
CSNK1D-209ENST00000578904 CASKIN1Q8WXD9 1431 aa21.9■■□□□ 1.1
CSNK1D-209ENST00000578904 ZCCHC11Q5TAX3 1644 aaKnown RBP21.9■■□□□ 1.1
CSNK1D-209ENST00000578904 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
CSNK1D-209ENST00000578904 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.1
CSNK1D-209ENST00000578904 ATP1B4Q9UN42 357 aaPredicted RBP21.89■■□□□ 1.09
CSNK1D-209ENST00000578904 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
CSNK1D-209ENST00000578904 ATP10BO94823 1461 aa21.83■■□□□ 1.09
CSNK1D-209ENST00000578904 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
CSNK1D-209ENST00000578904 EPRSP07814 1512 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-209ENST00000578904 CDK13Q14004 1512 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-209ENST00000578904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
CSNK1D-209ENST00000578904 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
CSNK1D-209ENST00000578904 CCDC18Q5T9S5 1454 aa21.81■■□□□ 1.08
CSNK1D-209ENST00000578904 LRRIQ1Q96JM4 1722 aa21.8■■□□□ 1.08
CSNK1D-209ENST00000578904 ASXL2Q76L83 1435 aa21.79■■□□□ 1.08
CSNK1D-209ENST00000578904 APLP2Q06481 763 aa21.78■■□□□ 1.08
CSNK1D-209ENST00000578904 WDR7Q9Y4E6 1490 aa21.75■■□□□ 1.07
CSNK1D-209ENST00000578904 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
CSNK1D-209ENST00000578904 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
CSNK1D-209ENST00000578904 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
CSNK1D-209ENST00000578904 TIAM1Q13009 1591 aa21.68■■□□□ 1.06
CSNK1D-209ENST00000578904 DIP2BQ9P265 1576 aa21.67■■□□□ 1.06
CSNK1D-209ENST00000578904 ABCC10Q5T3U5 1492 aa21.66■■□□□ 1.06
CSNK1D-209ENST00000578904 TROQ12816 1431 aaPredicted RBP21.64■■□□□ 1.06
CSNK1D-209ENST00000578904 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
CSNK1D-209ENST00000578904 MAP3K1Q13233 1512 aa21.63■■□□□ 1.05
CSNK1D-209ENST00000578904 MAGI3Q5TCQ9 1506 aa21.63■■□□□ 1.05
CSNK1D-209ENST00000578904 MTUS2Q5JR59 1369 aa21.61■■□□□ 1.05
CSNK1D-209ENST00000578904 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
CSNK1D-209ENST00000578904 KIF13AQ9H1H9 1805 aa21.6■■□□□ 1.05
CSNK1D-209ENST00000578904 KIF14Q15058 1648 aa21.6■■□□□ 1.05
CSNK1D-209ENST00000578904 GLI2P10070 1586 aa21.6■■□□□ 1.05
CSNK1D-209ENST00000578904 FAM69CQ0P6D2 419 aa21.59■■□□□ 1.05
CSNK1D-209ENST00000578904 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
CSNK1D-209ENST00000578904 ABCA9Q8IUA7 1624 aa21.55■■□□□ 1.04
CSNK1D-209ENST00000578904 TTC37Q6PGP7 1564 aa21.53■■□□□ 1.04
CSNK1D-209ENST00000578904 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.53■■□□□ 1.04
CSNK1D-209ENST00000578904 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
CSNK1D-209ENST00000578904 SUPT6HQ7KZ85 1726 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-209ENST00000578904 KANK4Q5T7N3 995 aaPredicted RBP21.5■■□□□ 1.03
CSNK1D-209ENST00000578904 CD109Q6YHK3 1445 aa21.48■■□□□ 1.03
CSNK1D-209ENST00000578904 TSPOAP1O95153 1857 aa21.46■■□□□ 1.03
CSNK1D-209ENST00000578904 NCOA2Q15596 1464 aa21.45■■□□□ 1.03
CSNK1D-209ENST00000578904 MYO5CQ9NQX4 1742 aa21.44■■□□□ 1.02
CSNK1D-209ENST00000578904 PPRC1Q5VV67 1664 aaKnown RBP21.43■■□□□ 1.02
CSNK1D-209ENST00000578904 TEX14Q8IWB6 1497 aa21.41■■□□□ 1.02
CSNK1D-209ENST00000578904 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
CSNK1D-209ENST00000578904 PREX2Q70Z35 1606 aa21.4■■□□□ 1.02
CSNK1D-209ENST00000578904 PLCH2O75038 1416 aa21.39■■□□□ 1.02
CSNK1D-209ENST00000578904 CDC42BPAQ5VT25 1732 aa21.39■■□□□ 1.01
CSNK1D-209ENST00000578904 PPARGC1BQ86YN6 1023 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-209ENST00000578904 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
CSNK1D-209ENST00000578904 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
CSNK1D-209ENST00000578904 ARAP3Q8WWN8 1544 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms