RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 NUP160Q12769 1436 aa16.4■□□□□ 0.22
SNX11-205ENST00000578861 TSPOAP1O95153 1857 aa16.38■□□□□ 0.21
SNX11-205ENST00000578861 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
SNX11-205ENST00000578861 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
SNX11-205ENST00000578861 CUX1P39880 1505 aa16.37■□□□□ 0.21
SNX11-205ENST00000578861 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
SNX11-205ENST00000578861 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
SNX11-205ENST00000578861 TTBK1Q5TCY1 1321 aaPredicted RBP16.29■□□□□ 0.2
SNX11-205ENST00000578861 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.2
SNX11-205ENST00000578861 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
SNX11-205ENST00000578861 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
SNX11-205ENST00000578861 ADCY10Q96PN6 1610 aa16.23■□□□□ 0.19
SNX11-205ENST00000578861 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
SNX11-205ENST00000578861 COL17A1Q9UMD9 1497 aaPredicted RBP16.21■□□□□ 0.19
SNX11-205ENST00000578861 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
SNX11-205ENST00000578861 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
SNX11-205ENST00000578861 ASXL2Q76L83 1435 aa16.11■□□□□ 0.17
SNX11-205ENST00000578861 CERKQ8TCT0 537 aa16.1■□□□□ 0.17
SNX11-205ENST00000578861 PTPRGP23470 1445 aa16.09■□□□□ 0.17
SNX11-205ENST00000578861 PLB1Q6P1J6 1458 aa16.08■□□□□ 0.16
SNX11-205ENST00000578861 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
SNX11-205ENST00000578861 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
SNX11-205ENST00000578861 GLI2P10070 1586 aa16.03■□□□□ 0.16
SNX11-205ENST00000578861 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
SNX11-205ENST00000578861 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
SNX11-205ENST00000578861 ABCC2Q92887 1545 aa16.01■□□□□ 0.15
SNX11-205ENST00000578861 HSPA2P54652 639 aa16■□□□□ 0.15
SNX11-205ENST00000578861 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
SNX11-205ENST00000578861 PTPRMP28827 1452 aa15.97■□□□□ 0.15
SNX11-205ENST00000578861 EPRSP07814 1512 aaKnown RBP15.96■□□□□ 0.15
SNX11-205ENST00000578861 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
SNX11-205ENST00000578861 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
SNX11-205ENST00000578861 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
SNX11-205ENST00000578861 SUPT5HO00267 1087 aaKnown RBP15.91■□□□□ 0.14
SNX11-205ENST00000578861 PCF11O94913 1555 aaKnown RBP15.91■□□□□ 0.14
SNX11-205ENST00000578861 SPATA31D1Q6ZQQ2 1576 aa15.91■□□□□ 0.14
SNX11-205ENST00000578861 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
SNX11-205ENST00000578861 CARMIL2Q6F5E8 1435 aa15.88■□□□□ 0.13
SNX11-205ENST00000578861 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
SNX11-205ENST00000578861 KIF21BO75037 1637 aa15.87■□□□□ 0.13
SNX11-205ENST00000578861 UACAQ9BZF9 1416 aa15.87■□□□□ 0.13
SNX11-205ENST00000578861 CUL7Q14999 1698 aa15.85■□□□□ 0.13
SNX11-205ENST00000578861 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
SNX11-205ENST00000578861 UHRF1BP1LA0JNW5 1464 aa15.83■□□□□ 0.12
SNX11-205ENST00000578861 KDM5BQ9UGL1 1544 aa15.78■□□□□ 0.12
SNX11-205ENST00000578861 RAPGEF3O95398 923 aa15.76■□□□□ 0.11
SNX11-205ENST00000578861 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
SNX11-205ENST00000578861 ADAMTSL3P82987 1691 aa15.75■□□□□ 0.11
SNX11-205ENST00000578861 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
SNX11-205ENST00000578861 IGF1RP08069 1367 aa15.74■□□□□ 0.11
SNX11-205ENST00000578861 BIVM-ERCC5R4GMW8 1640 aa15.72■□□□□ 0.11
SNX11-205ENST00000578861 ZCCHC11Q5TAX3 1644 aaKnown RBP15.7■□□□□ 0.1
SNX11-205ENST00000578861 MADDQ8WXG6 1647 aa15.69■□□□□ 0.1
SNX11-205ENST00000578861 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
SNX11-205ENST00000578861 ARAP3Q8WWN8 1544 aa15.65■□□□□ 0.1
SNX11-205ENST00000578861 MLECQ14165 292 aa15.64■□□□□ 0.09
SNX11-205ENST00000578861 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
SNX11-205ENST00000578861 ARID3CA6NKF2 412 aa15.63■□□□□ 0.09
SNX11-205ENST00000578861 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
SNX11-205ENST00000578861 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
SNX11-205ENST00000578861 RIMS1Q86UR5 1692 aaKnown RBP15.61■□□□□ 0.09
SNX11-205ENST00000578861 IQGAP2Q13576 1575 aa15.6■□□□□ 0.09
SNX11-205ENST00000578861 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
SNX11-205ENST00000578861 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
SNX11-205ENST00000578861 YEATS2Q9ULM3 1422 aa15.6■□□□□ 0.09
SNX11-205ENST00000578861 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
SNX11-205ENST00000578861 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
SNX11-205ENST00000578861 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
SNX11-205ENST00000578861 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
SNX11-205ENST00000578861 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
SNX11-205ENST00000578861 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
SNX11-205ENST00000578861 FANCAO15360 1455 aa15.46■□□□□ 0.06
SNX11-205ENST00000578861 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
SNX11-205ENST00000578861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.45■□□□□ 0.06
SNX11-205ENST00000578861 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
SNX11-205ENST00000578861 KIAA0556O60303 1618 aa15.45■□□□□ 0.06
SNX11-205ENST00000578861 NEO1Q92859 1461 aa15.44■□□□□ 0.06
SNX11-205ENST00000578861 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
SNX11-205ENST00000578861 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
SNX11-205ENST00000578861 PTPRTO14522 1441 aa15.43■□□□□ 0.06
SNX11-205ENST00000578861 HSPA1LP34931 641 aa15.41■□□□□ 0.06
SNX11-205ENST00000578861 UHRF1BP1Q6BDS2 1440 aa15.41■□□□□ 0.06
SNX11-205ENST00000578861 FRMPD1Q5SYB0 1578 aa15.41■□□□□ 0.06
SNX11-205ENST00000578861 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
SNX11-205ENST00000578861 ARHGEF40Q8TER5 1519 aa15.4■□□□□ 0.06
SNX11-205ENST00000578861 PIP4K2BP78356 416 aa15.4■□□□□ 0.06
SNX11-205ENST00000578861 IQSEC2Q5JU85 1478 aa15.39■□□□□ 0.05
SNX11-205ENST00000578861 LTBP4Q8N2S1 1624 aa15.39■□□□□ 0.05
SNX11-205ENST00000578861 STRCQ7RTU9 1775 aa15.39■□□□□ 0.05
SNX11-205ENST00000578861 ABCA8O94911 1581 aa15.37■□□□□ 0.05
SNX11-205ENST00000578861 P3H3Q8IVL6 736 aa15.36■□□□□ 0.05
SNX11-205ENST00000578861 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
SNX11-205ENST00000578861 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
SNX11-205ENST00000578861 ATP10BO94823 1461 aa15.34■□□□□ 0.05
SNX11-205ENST00000578861 PREX1Q8TCU6 1659 aa15.34■□□□□ 0.05
SNX11-205ENST00000578861 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
SNX11-205ENST00000578861 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.04
SNX11-205ENST00000578861 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
SNX11-205ENST00000578861 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
SNX11-205ENST00000578861 ZFYVE16Q7Z3T8 1539 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms