RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ARHGEF11O15085 1522 aa19■□□□□ 0.63
ERBB2-208ENST00000578630 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
ERBB2-208ENST00000578630 RIMBP3CA6NJZ7 1639 aa18.96■□□□□ 0.63
ERBB2-208ENST00000578630 RIMBP3BA6NNM3 1639 aa18.96■□□□□ 0.63
ERBB2-208ENST00000578630 RIMBP3Q9UFD9 1639 aa18.96■□□□□ 0.63
ERBB2-208ENST00000578630 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
ERBB2-208ENST00000578630 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
ERBB2-208ENST00000578630 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
ERBB2-208ENST00000578630 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
ERBB2-208ENST00000578630 EHMT2Q96KQ7 1210 aa18.86■□□□□ 0.61
ERBB2-208ENST00000578630 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
ERBB2-208ENST00000578630 IQGAP2Q13576 1575 aa18.85■□□□□ 0.61
ERBB2-208ENST00000578630 KIF21BO75037 1637 aa18.81■□□□□ 0.6
ERBB2-208ENST00000578630 ERCC6L2Q5T890 1561 aa18.81■□□□□ 0.6
ERBB2-208ENST00000578630 TTBK1Q5TCY1 1321 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-208ENST00000578630 GOLGA3Q08378 1498 aa18.78■□□□□ 0.6
ERBB2-208ENST00000578630 PTPRGP23470 1445 aa18.78■□□□□ 0.6
ERBB2-208ENST00000578630 TNIKQ9UKE5 1360 aa18.78■□□□□ 0.6
ERBB2-208ENST00000578630 RANGAP1P46060 587 aaPredicted RBP18.77■□□□□ 0.6
ERBB2-208ENST00000578630 UGGT2Q9NYU1 1516 aa18.77■□□□□ 0.6
ERBB2-208ENST00000578630 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
ERBB2-208ENST00000578630 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
ERBB2-208ENST00000578630 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
ERBB2-208ENST00000578630 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
ERBB2-208ENST00000578630 KIAA0556O60303 1618 aa18.64■□□□□ 0.57
ERBB2-208ENST00000578630 UACAQ9BZF9 1416 aa18.61■□□□□ 0.57
ERBB2-208ENST00000578630 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
ERBB2-208ENST00000578630 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
ERBB2-208ENST00000578630 UHRF1BP1LA0JNW5 1464 aa18.55■□□□□ 0.56
ERBB2-208ENST00000578630 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
ERBB2-208ENST00000578630 EFCAB5A4FU69 1503 aa18.54■□□□□ 0.56
ERBB2-208ENST00000578630 FHOD3Q2V2M9 1422 aa18.53■□□□□ 0.56
ERBB2-208ENST00000578630 PLB1Q6P1J6 1458 aa18.51■□□□□ 0.55
ERBB2-208ENST00000578630 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
ERBB2-208ENST00000578630 ADCY10Q96PN6 1610 aa18.5■□□□□ 0.55
ERBB2-208ENST00000578630 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
ERBB2-208ENST00000578630 CLIP1P30622 1438 aa18.48■□□□□ 0.55
ERBB2-208ENST00000578630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-208ENST00000578630 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
ERBB2-208ENST00000578630 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-208ENST00000578630 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
ERBB2-208ENST00000578630 ABCA8O94911 1581 aa18.45■□□□□ 0.54
ERBB2-208ENST00000578630 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
ERBB2-208ENST00000578630 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
ERBB2-208ENST00000578630 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
ERBB2-208ENST00000578630 MAPKBP1O60336 1514 aa18.41■□□□□ 0.54
ERBB2-208ENST00000578630 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
ERBB2-208ENST00000578630 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
ERBB2-208ENST00000578630 ATP10BO94823 1461 aa18.39■□□□□ 0.53
ERBB2-208ENST00000578630 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
ERBB2-208ENST00000578630 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
ERBB2-208ENST00000578630 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
ERBB2-208ENST00000578630 ABCC10Q5T3U5 1492 aa18.36■□□□□ 0.53
ERBB2-208ENST00000578630 CDK11AQ9UQ88 783 aaPredicted RBP18.36■□□□□ 0.53
ERBB2-208ENST00000578630 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
ERBB2-208ENST00000578630 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.53
ERBB2-208ENST00000578630 WDR7Q9Y4E6 1490 aa18.3■□□□□ 0.52
ERBB2-208ENST00000578630 CASKIN1Q8WXD9 1431 aa18.3■□□□□ 0.52
ERBB2-208ENST00000578630 EPRSP07814 1512 aaKnown RBP18.26■□□□□ 0.51
ERBB2-208ENST00000578630 HECW1Q76N89 1606 aa18.25■□□□□ 0.51
ERBB2-208ENST00000578630 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
ERBB2-208ENST00000578630 GLI2P10070 1586 aa18.22■□□□□ 0.51
ERBB2-208ENST00000578630 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
ERBB2-208ENST00000578630 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
ERBB2-208ENST00000578630 CDK13Q14004 1512 aaKnown RBP18.2■□□□□ 0.5
ERBB2-208ENST00000578630 KIF13AQ9H1H9 1805 aa18.2■□□□□ 0.5
ERBB2-208ENST00000578630 CD109Q6YHK3 1445 aa18.19■□□□□ 0.5
ERBB2-208ENST00000578630 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
ERBB2-208ENST00000578630 APLP2Q06481 763 aa18.17■□□□□ 0.5
ERBB2-208ENST00000578630 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
ERBB2-208ENST00000578630 TROQ12816 1431 aaPredicted RBP18.14■□□□□ 0.49
ERBB2-208ENST00000578630 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
ERBB2-208ENST00000578630 TSPOAP1O95153 1857 aa18.1■□□□□ 0.49
ERBB2-208ENST00000578630 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
ERBB2-208ENST00000578630 MAGI3Q5TCQ9 1506 aa18.09■□□□□ 0.49
ERBB2-208ENST00000578630 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
ERBB2-208ENST00000578630 CFAP43Q8NDM7 1665 aa18.07■□□□□ 0.48
ERBB2-208ENST00000578630 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
ERBB2-208ENST00000578630 ABCA9Q8IUA7 1624 aa18.06■□□□□ 0.48
ERBB2-208ENST00000578630 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
ERBB2-208ENST00000578630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.04■□□□□ 0.48
ERBB2-208ENST00000578630 LRRIQ1Q96JM4 1722 aa18.04■□□□□ 0.48
ERBB2-208ENST00000578630 PLCH2O75038 1416 aa18.03■□□□□ 0.48
ERBB2-208ENST00000578630 KIF14Q15058 1648 aa18.01■□□□□ 0.47
ERBB2-208ENST00000578630 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
ERBB2-208ENST00000578630 NEO1Q92859 1461 aa17.99■□□□□ 0.47
ERBB2-208ENST00000578630 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
ERBB2-208ENST00000578630 KANK4Q5T7N3 995 aaPredicted RBP17.98■□□□□ 0.47
ERBB2-208ENST00000578630 FANCAO15360 1455 aa17.97■□□□□ 0.47
ERBB2-208ENST00000578630 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
ERBB2-208ENST00000578630 AKNAQ7Z591 1439 aa17.97■□□□□ 0.47
ERBB2-208ENST00000578630 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
ERBB2-208ENST00000578630 KDM6BO15054 1643 aa17.96■□□□□ 0.47
ERBB2-208ENST00000578630 TIAM1Q13009 1591 aa17.96■□□□□ 0.46
ERBB2-208ENST00000578630 TTC37Q6PGP7 1564 aa17.96■□□□□ 0.46
ERBB2-208ENST00000578630 EHBP1L1Q8N3D4 1523 aa17.95■□□□□ 0.46
ERBB2-208ENST00000578630 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
ERBB2-208ENST00000578630 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
ERBB2-208ENST00000578630 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
ERBB2-208ENST00000578630 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms