RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
IFT20-207ENST00000578547 CLASP1Q7Z460 1538 aa19.83■□□□□ 0.77
IFT20-207ENST00000578547 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
IFT20-207ENST00000578547 CTTNBP2Q8WZ74 1663 aa19.8■□□□□ 0.76
IFT20-207ENST00000578547 KIAA0586Q9BVV6 1533 aa19.78■□□□□ 0.76
IFT20-207ENST00000578547 LOC105371045A0A1W2PR82 267 aa19.75■□□□□ 0.75
IFT20-207ENST00000578547 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
IFT20-207ENST00000578547 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
IFT20-207ENST00000578547 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
IFT20-207ENST00000578547 SHROOM2Q13796 1616 aa19.68■□□□□ 0.74
IFT20-207ENST00000578547 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
IFT20-207ENST00000578547 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
IFT20-207ENST00000578547 TNIKQ9UKE5 1360 aa19.65■□□□□ 0.74
IFT20-207ENST00000578547 ERCC6L2Q5T890 1561 aa19.63■□□□□ 0.73
IFT20-207ENST00000578547 RIMBP3CA6NJZ7 1639 aa19.62■□□□□ 0.73
IFT20-207ENST00000578547 RIMBP3BA6NNM3 1639 aa19.62■□□□□ 0.73
IFT20-207ENST00000578547 RIMBP3Q9UFD9 1639 aa19.62■□□□□ 0.73
IFT20-207ENST00000578547 UGGT2Q9NYU1 1516 aa19.61■□□□□ 0.73
IFT20-207ENST00000578547 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
IFT20-207ENST00000578547 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
IFT20-207ENST00000578547 KIAA0556O60303 1618 aa19.55■□□□□ 0.72
IFT20-207ENST00000578547 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
IFT20-207ENST00000578547 SAMD9Q5K651 1589 aa19.54■□□□□ 0.72
IFT20-207ENST00000578547 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
IFT20-207ENST00000578547 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
IFT20-207ENST00000578547 CLIP1P30622 1438 aa19.53■□□□□ 0.72
IFT20-207ENST00000578547 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
IFT20-207ENST00000578547 P3H3Q8IVL6 736 aa19.53■□□□□ 0.72
IFT20-207ENST00000578547 TTBK1Q5TCY1 1321 aaPredicted RBP19.5■□□□□ 0.71
IFT20-207ENST00000578547 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
IFT20-207ENST00000578547 PTPRGP23470 1445 aa19.48■□□□□ 0.71
IFT20-207ENST00000578547 FHOD3Q2V2M9 1422 aa19.48■□□□□ 0.71
IFT20-207ENST00000578547 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
IFT20-207ENST00000578547 FMN1Q68DA7 1419 aa19.33■□□□□ 0.68
IFT20-207ENST00000578547 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
IFT20-207ENST00000578547 PCF11O94913 1555 aaKnown RBP19.29■□□□□ 0.68
IFT20-207ENST00000578547 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
IFT20-207ENST00000578547 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
IFT20-207ENST00000578547 ABCA8O94911 1581 aa19.28■□□□□ 0.68
IFT20-207ENST00000578547 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
IFT20-207ENST00000578547 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
IFT20-207ENST00000578547 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
IFT20-207ENST00000578547 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
IFT20-207ENST00000578547 NPM1P06748 294 aaKnown RBP eCLIP19.24■□□□□ 0.67
IFT20-207ENST00000578547 HECW1Q76N89 1606 aa19.24■□□□□ 0.67
IFT20-207ENST00000578547 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
IFT20-207ENST00000578547 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
IFT20-207ENST00000578547 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
IFT20-207ENST00000578547 NUP153P49790 1475 aaKnown RBP19.21■□□□□ 0.67
IFT20-207ENST00000578547 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
IFT20-207ENST00000578547 ATP10BO94823 1461 aa19.16■□□□□ 0.66
IFT20-207ENST00000578547 CDK13Q14004 1512 aaKnown RBP19.15■□□□□ 0.66
IFT20-207ENST00000578547 ZCCHC11Q5TAX3 1644 aaKnown RBP19.15■□□□□ 0.66
IFT20-207ENST00000578547 LRRIQ1Q96JM4 1722 aa19.15■□□□□ 0.66
IFT20-207ENST00000578547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
IFT20-207ENST00000578547 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
IFT20-207ENST00000578547 EPRSP07814 1512 aaKnown RBP19.14■□□□□ 0.65
IFT20-207ENST00000578547 CCDC18Q5T9S5 1454 aa19.11■□□□□ 0.65
IFT20-207ENST00000578547 ASXL2Q76L83 1435 aa19.09■□□□□ 0.65
IFT20-207ENST00000578547 MAPKBP1O60336 1514 aa19.09■□□□□ 0.65
IFT20-207ENST00000578547 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.64
IFT20-207ENST00000578547 APLP2Q06481 763 aa19.06■□□□□ 0.64
IFT20-207ENST00000578547 TIAM1Q13009 1591 aa19.06■□□□□ 0.64
IFT20-207ENST00000578547 PLEKHD1A6NEE1 506 aa19.04■□□□□ 0.64
IFT20-207ENST00000578547 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
IFT20-207ENST00000578547 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
IFT20-207ENST00000578547 WDR7Q9Y4E6 1490 aa19.02■□□□□ 0.63
IFT20-207ENST00000578547 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
IFT20-207ENST00000578547 CDK11AQ9UQ88 783 aaPredicted RBP19■□□□□ 0.63
IFT20-207ENST00000578547 MAP3K1Q13233 1512 aa19■□□□□ 0.63
IFT20-207ENST00000578547 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
IFT20-207ENST00000578547 ABCC10Q5T3U5 1492 aa18.99■□□□□ 0.63
IFT20-207ENST00000578547 MTUS2Q5JR59 1369 aa18.98■□□□□ 0.63
IFT20-207ENST00000578547 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
IFT20-207ENST00000578547 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
IFT20-207ENST00000578547 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
IFT20-207ENST00000578547 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
IFT20-207ENST00000578547 KANK4Q5T7N3 995 aaPredicted RBP18.94■□□□□ 0.62
IFT20-207ENST00000578547 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
IFT20-207ENST00000578547 KIF14Q15058 1648 aa18.92■□□□□ 0.62
IFT20-207ENST00000578547 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
IFT20-207ENST00000578547 GLI2P10070 1586 aa18.9■□□□□ 0.62
IFT20-207ENST00000578547 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
IFT20-207ENST00000578547 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
IFT20-207ENST00000578547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
IFT20-207ENST00000578547 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
IFT20-207ENST00000578547 CD109Q6YHK3 1445 aa18.84■□□□□ 0.61
IFT20-207ENST00000578547 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
IFT20-207ENST00000578547 MAP3K4Q9Y6R4 1608 aa18.82■□□□□ 0.6
IFT20-207ENST00000578547 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
IFT20-207ENST00000578547 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
IFT20-207ENST00000578547 TSPOAP1O95153 1857 aa18.78■□□□□ 0.6
IFT20-207ENST00000578547 CDC42BPAQ5VT25 1732 aa18.76■□□□□ 0.59
IFT20-207ENST00000578547 ITSN2Q9NZM3 1697 aa18.76■□□□□ 0.59
IFT20-207ENST00000578547 PLCH2O75038 1416 aa18.75■□□□□ 0.59
IFT20-207ENST00000578547 PREX2Q70Z35 1606 aa18.75■□□□□ 0.59
IFT20-207ENST00000578547 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
IFT20-207ENST00000578547 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
IFT20-207ENST00000578547 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
IFT20-207ENST00000578547 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms