RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
CTC1-205ENST00000578537 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
CTC1-205ENST00000578537 GOLGA3Q08378 1498 aa21.36■■□□□ 1.01
CTC1-205ENST00000578537 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
CTC1-205ENST00000578537 ARAP1Q96P48 1450 aa21.32■■□□□ 1
CTC1-205ENST00000578537 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
CTC1-205ENST00000578537 NUP160Q12769 1436 aa21.27■■□□□ 1
CTC1-205ENST00000578537 FBLN2P98095 1184 aa21.24■□□□□ 0.99
CTC1-205ENST00000578537 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
CTC1-205ENST00000578537 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
CTC1-205ENST00000578537 IQGAP2Q13576 1575 aa21.19■□□□□ 0.98
CTC1-205ENST00000578537 SHROOM2Q13796 1616 aa21.14■□□□□ 0.97
CTC1-205ENST00000578537 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.97
CTC1-205ENST00000578537 TNIKQ9UKE5 1360 aa21.13■□□□□ 0.97
CTC1-205ENST00000578537 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
CTC1-205ENST00000578537 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
CTC1-205ENST00000578537 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
CTC1-205ENST00000578537 UGGT2Q9NYU1 1516 aa21.07■□□□□ 0.96
CTC1-205ENST00000578537 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
CTC1-205ENST00000578537 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
CTC1-205ENST00000578537 KIAA0556O60303 1618 aa21.03■□□□□ 0.96
CTC1-205ENST00000578537 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
CTC1-205ENST00000578537 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
CTC1-205ENST00000578537 RANGAP1P46060 587 aaPredicted RBP20.99■□□□□ 0.95
CTC1-205ENST00000578537 CLIP1P30622 1438 aa20.97■□□□□ 0.95
CTC1-205ENST00000578537 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
CTC1-205ENST00000578537 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
CTC1-205ENST00000578537 FHOD3Q2V2M9 1422 aa20.92■□□□□ 0.94
CTC1-205ENST00000578537 JPH4Q96JJ6 628 aa20.91■□□□□ 0.94
CTC1-205ENST00000578537 P3H3Q8IVL6 736 aa20.85■□□□□ 0.93
CTC1-205ENST00000578537 PCF11O94913 1555 aaKnown RBP20.82■□□□□ 0.92
CTC1-205ENST00000578537 LRRIQ1Q96JM4 1722 aa20.81■□□□□ 0.92
CTC1-205ENST00000578537 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
CTC1-205ENST00000578537 ABCA8O94911 1581 aa20.74■□□□□ 0.91
CTC1-205ENST00000578537 RAPGEF6Q8TEU7 1601 aa20.74■□□□□ 0.91
CTC1-205ENST00000578537 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
CTC1-205ENST00000578537 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
CTC1-205ENST00000578537 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
CTC1-205ENST00000578537 ADCY10Q96PN6 1610 aa20.69■□□□□ 0.9
CTC1-205ENST00000578537 PTPRGP23470 1445 aa20.68■□□□□ 0.9
CTC1-205ENST00000578537 FMN1Q68DA7 1419 aa20.67■□□□□ 0.9
CTC1-205ENST00000578537 HECW1Q76N89 1606 aa20.66■□□□□ 0.9
CTC1-205ENST00000578537 KIF13AQ9H1H9 1805 aa20.65■□□□□ 0.9
CTC1-205ENST00000578537 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
CTC1-205ENST00000578537 NUP153P49790 1475 aaKnown RBP20.64■□□□□ 0.89
CTC1-205ENST00000578537 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
CTC1-205ENST00000578537 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
CTC1-205ENST00000578537 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
CTC1-205ENST00000578537 CDK13Q14004 1512 aaKnown RBP20.61■□□□□ 0.89
CTC1-205ENST00000578537 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
CTC1-205ENST00000578537 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
CTC1-205ENST00000578537 UHRF1BP1LA0JNW5 1464 aa20.57■□□□□ 0.88
CTC1-205ENST00000578537 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
CTC1-205ENST00000578537 EPRSP07814 1512 aaKnown RBP20.55■□□□□ 0.88
CTC1-205ENST00000578537 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
CTC1-205ENST00000578537 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
CTC1-205ENST00000578537 ATP10BO94823 1461 aa20.5■□□□□ 0.87
CTC1-205ENST00000578537 KDM5BQ9UGL1 1544 aa20.5■□□□□ 0.87
CTC1-205ENST00000578537 CCDC18Q5T9S5 1454 aa20.48■□□□□ 0.87
CTC1-205ENST00000578537 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
CTC1-205ENST00000578537 MAP3K1Q13233 1512 aa20.45■□□□□ 0.86
CTC1-205ENST00000578537 KIF14Q15058 1648 aa20.41■□□□□ 0.86
CTC1-205ENST00000578537 ABCC10Q5T3U5 1492 aa20.4■□□□□ 0.86
CTC1-205ENST00000578537 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
CTC1-205ENST00000578537 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
CTC1-205ENST00000578537 EHBP1L1Q8N3D4 1523 aa20.38■□□□□ 0.85
CTC1-205ENST00000578537 LRRC9Q6ZRR7 1453 aa20.38■□□□□ 0.85
CTC1-205ENST00000578537 MAPKBP1O60336 1514 aa20.37■□□□□ 0.85
CTC1-205ENST00000578537 PPARGC1BQ86YN6 1023 aaKnown RBP20.36■□□□□ 0.85
CTC1-205ENST00000578537 DIP2BQ9P265 1576 aa20.36■□□□□ 0.85
CTC1-205ENST00000578537 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
CTC1-205ENST00000578537 ASXL2Q76L83 1435 aa20.33■□□□□ 0.84
CTC1-205ENST00000578537 KDM4FA0A1W2PPD8 638 aa20.32■□□□□ 0.84
CTC1-205ENST00000578537 TROQ12816 1431 aaPredicted RBP20.32■□□□□ 0.84
CTC1-205ENST00000578537 SUPT6HQ7KZ85 1726 aaKnown RBP20.32■□□□□ 0.84
CTC1-205ENST00000578537 KDM6BO15054 1643 aa20.31■□□□□ 0.84
CTC1-205ENST00000578537 WDR7Q9Y4E6 1490 aa20.31■□□□□ 0.84
CTC1-205ENST00000578537 TTC37Q6PGP7 1564 aa20.31■□□□□ 0.84
CTC1-205ENST00000578537 TSPOAP1O95153 1857 aa20.29■□□□□ 0.84
CTC1-205ENST00000578537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
CTC1-205ENST00000578537 HNRNPUL2Q1KMD3 747 aaKnown RBP20.28■□□□□ 0.84
CTC1-205ENST00000578537 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
CTC1-205ENST00000578537 CDC42BPAQ5VT25 1732 aa20.27■□□□□ 0.83
CTC1-205ENST00000578537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.83
CTC1-205ENST00000578537 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
CTC1-205ENST00000578537 APLP2Q06481 763 aa20.24■□□□□ 0.83
CTC1-205ENST00000578537 ABCA9Q8IUA7 1624 aa20.23■□□□□ 0.83
CTC1-205ENST00000578537 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
CTC1-205ENST00000578537 CDC42BPBQ9Y5S2 1711 aa20.21■□□□□ 0.83
CTC1-205ENST00000578537 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
CTC1-205ENST00000578537 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
CTC1-205ENST00000578537 PHLDB1Q86UU1 1377 aa20.2■□□□□ 0.82
CTC1-205ENST00000578537 MAP3K4Q9Y6R4 1608 aa20.18■□□□□ 0.82
CTC1-205ENST00000578537 PLEKHD1A6NEE1 506 aa20.18■□□□□ 0.82
CTC1-205ENST00000578537 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
CTC1-205ENST00000578537 PPRC1Q5VV67 1664 aaKnown RBP20.16■□□□□ 0.82
CTC1-205ENST00000578537 GLI2P10070 1586 aa20.16■□□□□ 0.82
CTC1-205ENST00000578537 CDK11AQ9UQ88 783 aaPredicted RBP20.15■□□□□ 0.82
CTC1-205ENST00000578537 KCNH8Q96L42 1107 aa20.14■□□□□ 0.81
CTC1-205ENST00000578537 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms