RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
SRSF1-202ENST00000578430 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
SRSF1-202ENST00000578430 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
SRSF1-202ENST00000578430 SYNJ2O15056 1496 aa21.61■■□□□ 1.05
SRSF1-202ENST00000578430 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
SRSF1-202ENST00000578430 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
SRSF1-202ENST00000578430 ARHGEF11O15085 1522 aa21.54■■□□□ 1.04
SRSF1-202ENST00000578430 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
SRSF1-202ENST00000578430 CTTNBP2Q8WZ74 1663 aa21.49■■□□□ 1.03
SRSF1-202ENST00000578430 CHD1O14646 1710 aa21.47■■□□□ 1.03
SRSF1-202ENST00000578430 FBLN2P98095 1184 aa21.44■■□□□ 1.02
SRSF1-202ENST00000578430 NUP160Q12769 1436 aa21.43■■□□□ 1.02
SRSF1-202ENST00000578430 CLIP1P30622 1438 aa21.42■■□□□ 1.02
SRSF1-202ENST00000578430 KIAA0586Q9BVV6 1533 aa21.41■■□□□ 1.02
SRSF1-202ENST00000578430 CYB5RLQ6IPT4 315 aa21.38■■□□□ 1.01
SRSF1-202ENST00000578430 IQGAP2Q13576 1575 aa21.38■■□□□ 1.01
SRSF1-202ENST00000578430 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
SRSF1-202ENST00000578430 EFCAB5A4FU69 1503 aa21.34■■□□□ 1.01
SRSF1-202ENST00000578430 ARAP1Q96P48 1450 aa21.32■■□□□ 1
SRSF1-202ENST00000578430 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
SRSF1-202ENST00000578430 ARHGAP35Q9NRY4 1499 aa21.3■■□□□ 1
SRSF1-202ENST00000578430 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
SRSF1-202ENST00000578430 SAMD9Q5K651 1589 aa21.26■□□□□ 0.99
SRSF1-202ENST00000578430 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
SRSF1-202ENST00000578430 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
SRSF1-202ENST00000578430 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
SRSF1-202ENST00000578430 VPS8Q8N3P4 1428 aa21.21■□□□□ 0.99
SRSF1-202ENST00000578430 CARMIL2Q6F5E8 1435 aa21.18■□□□□ 0.98
SRSF1-202ENST00000578430 SHROOM2Q13796 1616 aa21.17■□□□□ 0.98
SRSF1-202ENST00000578430 DISP1Q96F81 1524 aa21.16■□□□□ 0.98
SRSF1-202ENST00000578430 KIAA0556O60303 1618 aa21.15■□□□□ 0.98
SRSF1-202ENST00000578430 FHOD3Q2V2M9 1422 aa21.14■□□□□ 0.98
SRSF1-202ENST00000578430 FMN1Q68DA7 1419 aa21.14■□□□□ 0.98
SRSF1-202ENST00000578430 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
SRSF1-202ENST00000578430 PRG4Q92954 1404 aaPredicted RBP21.1■□□□□ 0.97
SRSF1-202ENST00000578430 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
SRSF1-202ENST00000578430 FYCO1Q9BQS8 1478 aa21.03■□□□□ 0.96
SRSF1-202ENST00000578430 APLP2Q06481 763 aa20.99■□□□□ 0.95
SRSF1-202ENST00000578430 PCF11O94913 1555 aaKnown RBP20.98■□□□□ 0.95
SRSF1-202ENST00000578430 MAP3K1Q13233 1512 aa20.97■□□□□ 0.95
SRSF1-202ENST00000578430 PTPRGP23470 1445 aa20.96■□□□□ 0.95
SRSF1-202ENST00000578430 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
SRSF1-202ENST00000578430 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
SRSF1-202ENST00000578430 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
SRSF1-202ENST00000578430 CCDC18Q5T9S5 1454 aa20.89■□□□□ 0.94
SRSF1-202ENST00000578430 ABCA8O94911 1581 aa20.89■□□□□ 0.93
SRSF1-202ENST00000578430 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-202ENST00000578430 TIAM1Q13009 1591 aa20.87■□□□□ 0.93
SRSF1-202ENST00000578430 TTBK1Q5TCY1 1321 aaPredicted RBP20.86■□□□□ 0.93
SRSF1-202ENST00000578430 PLB1Q6P1J6 1458 aa20.86■□□□□ 0.93
SRSF1-202ENST00000578430 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
SRSF1-202ENST00000578430 UACAQ9BZF9 1416 aa20.85■□□□□ 0.93
SRSF1-202ENST00000578430 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.93
SRSF1-202ENST00000578430 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.92
SRSF1-202ENST00000578430 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
SRSF1-202ENST00000578430 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
SRSF1-202ENST00000578430 ABCC2Q92887 1545 aa20.78■□□□□ 0.92
SRSF1-202ENST00000578430 LRRIQ1Q96JM4 1722 aa20.78■□□□□ 0.92
SRSF1-202ENST00000578430 LRRC9Q6ZRR7 1453 aa20.78■□□□□ 0.92
SRSF1-202ENST00000578430 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
SRSF1-202ENST00000578430 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
SRSF1-202ENST00000578430 CDK13Q14004 1512 aaKnown RBP20.73■□□□□ 0.91
SRSF1-202ENST00000578430 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
SRSF1-202ENST00000578430 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
SRSF1-202ENST00000578430 ATP10BO94823 1461 aa20.72■□□□□ 0.91
SRSF1-202ENST00000578430 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
SRSF1-202ENST00000578430 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
SRSF1-202ENST00000578430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
SRSF1-202ENST00000578430 HNRNPUL2Q1KMD3 747 aaKnown RBP20.67■□□□□ 0.9
SRSF1-202ENST00000578430 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
SRSF1-202ENST00000578430 ARID3CA6NKF2 412 aa20.65■□□□□ 0.9
SRSF1-202ENST00000578430 MSH5O43196 834 aa20.65■□□□□ 0.9
SRSF1-202ENST00000578430 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
SRSF1-202ENST00000578430 TROQ12816 1431 aaPredicted RBP20.64■□□□□ 0.89
SRSF1-202ENST00000578430 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
SRSF1-202ENST00000578430 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
SRSF1-202ENST00000578430 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
SRSF1-202ENST00000578430 SUPT6HQ7KZ85 1726 aaKnown RBP20.62■□□□□ 0.89
SRSF1-202ENST00000578430 ZCCHC11Q5TAX3 1644 aaKnown RBP20.61■□□□□ 0.89
SRSF1-202ENST00000578430 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
SRSF1-202ENST00000578430 NCOA2Q15596 1464 aa20.57■□□□□ 0.88
SRSF1-202ENST00000578430 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
SRSF1-202ENST00000578430 KIF14Q15058 1648 aa20.53■□□□□ 0.88
SRSF1-202ENST00000578430 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.87
SRSF1-202ENST00000578430 MYOM3Q5VTT5 1437 aa20.5■□□□□ 0.87
SRSF1-202ENST00000578430 WDR7Q9Y4E6 1490 aa20.49■□□□□ 0.87
SRSF1-202ENST00000578430 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SRSF1-202ENST00000578430 ASXL2Q76L83 1435 aa20.46■□□□□ 0.87
SRSF1-202ENST00000578430 MIA2Q96PC5 1412 aa20.46■□□□□ 0.87
SRSF1-202ENST00000578430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.46■□□□□ 0.87
SRSF1-202ENST00000578430 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
SRSF1-202ENST00000578430 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
SRSF1-202ENST00000578430 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-202ENST00000578430 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
SRSF1-202ENST00000578430 ITSN2Q9NZM3 1697 aa20.43■□□□□ 0.86
SRSF1-202ENST00000578430 FAM69CQ0P6D2 419 aa20.43■□□□□ 0.86
SRSF1-202ENST00000578430 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
SRSF1-202ENST00000578430 GPATCH8Q9UKJ3 1502 aaKnown RBP20.41■□□□□ 0.86
SRSF1-202ENST00000578430 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
SRSF1-202ENST00000578430 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.854e-20■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms