RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 SHROOM2Q13796 1616 aa36.59■■■■□ 3.45
PSMD11-206ENST00000578213 IQGAP2Q13576 1575 aa36.57■■■■□ 3.44
PSMD11-206ENST00000578213 GOLGA3Q08378 1498 aa36.56■■■■□ 3.44
PSMD11-206ENST00000578213 DNAJC5Q9H3Z4 198 aa36.52■■■■□ 3.44
PSMD11-206ENST00000578213 ARHGEF11O15085 1522 aa36.39■■■■□ 3.42
PSMD11-206ENST00000578213 UGGT2Q9NYU1 1516 aa36.37■■■■□ 3.41
PSMD11-206ENST00000578213 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
PSMD11-206ENST00000578213 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
PSMD11-206ENST00000578213 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
PSMD11-206ENST00000578213 JPH4Q96JJ6 628 aa36.36■■■■□ 3.41
PSMD11-206ENST00000578213 PRG4Q92954 1404 aaPredicted RBP36.29■■■■□ 3.4
PSMD11-206ENST00000578213 UBTFP17480 764 aaKnown RBP36.26■■■■□ 3.4
PSMD11-206ENST00000578213 ERCC6L2Q5T890 1561 aa36.23■■■■□ 3.39
PSMD11-206ENST00000578213 CARMIL2Q6F5E8 1435 aa36.23■■■■□ 3.39
PSMD11-206ENST00000578213 KIAA0556O60303 1618 aa36.2■■■■□ 3.39
PSMD11-206ENST00000578213 DISP1Q96F81 1524 aa36.19■■■■□ 3.38
PSMD11-206ENST00000578213 EHMT2Q96KQ7 1210 aa36.17■■■■□ 3.38
PSMD11-206ENST00000578213 SAMD9Q5K651 1589 aa36.17■■■■□ 3.38
PSMD11-206ENST00000578213 TNIKQ9UKE5 1360 aa36.15■■■■□ 3.38
PSMD11-206ENST00000578213 EFCAB5A4FU69 1503 aa36.14■■■■□ 3.38
PSMD11-206ENST00000578213 ARAP1Q96P48 1450 aa36.11■■■■□ 3.37
PSMD11-206ENST00000578213 LOC105371045A0A1W2PR82 267 aa35.93■■■■□ 3.34
PSMD11-206ENST00000578213 PTPRGP23470 1445 aa35.92■■■■□ 3.34
PSMD11-206ENST00000578213 ARHGAP35Q9NRY4 1499 aa35.92■■■■□ 3.34
PSMD11-206ENST00000578213 CLIP1P30622 1438 aa35.87■■■■□ 3.33
PSMD11-206ENST00000578213 RANGAP1P46060 587 aaPredicted RBP35.87■■■■□ 3.33
PSMD11-206ENST00000578213 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
PSMD11-206ENST00000578213 CEP162Q5TB80 1403 aa35.84■■■■□ 3.33
PSMD11-206ENST00000578213 FHOD3Q2V2M9 1422 aa35.83■■■■□ 3.33
PSMD11-206ENST00000578213 P3H3Q8IVL6 736 aa35.77■■■■□ 3.32
PSMD11-206ENST00000578213 ADCY10Q96PN6 1610 aa35.76■■■■□ 3.32
PSMD11-206ENST00000578213 ABCA8O94911 1581 aa35.76■■■■□ 3.31
PSMD11-206ENST00000578213 UHRF1BP1LA0JNW5 1464 aa35.75■■■■□ 3.31
PSMD11-206ENST00000578213 UACAQ9BZF9 1416 aa35.74■■■■□ 3.31
PSMD11-206ENST00000578213 ABCC2Q92887 1545 aa35.74■■■■□ 3.31
PSMD11-206ENST00000578213 FMN1Q68DA7 1419 aa35.73■■■■□ 3.31
PSMD11-206ENST00000578213 RAPGEF6Q8TEU7 1601 aa35.7■■■■□ 3.31
PSMD11-206ENST00000578213 TTBK1Q5TCY1 1321 aaPredicted RBP35.69■■■■□ 3.3
PSMD11-206ENST00000578213 PLB1Q6P1J6 1458 aa35.67■■■■□ 3.3
PSMD11-206ENST00000578213 HECW1Q76N89 1606 aa35.56■■■■□ 3.28
PSMD11-206ENST00000578213 KDM5BQ9UGL1 1544 aa35.56■■■■□ 3.28
PSMD11-206ENST00000578213 ZCCHC11Q5TAX3 1644 aaKnown RBP35.53■■■■□ 3.28
PSMD11-206ENST00000578213 PCF11O94913 1555 aaKnown RBP35.51■■■■□ 3.28
PSMD11-206ENST00000578213 NUP153P49790 1475 aaKnown RBP35.49■■■■□ 3.27
PSMD11-206ENST00000578213 FYCO1Q9BQS8 1478 aa35.48■■■■□ 3.27
PSMD11-206ENST00000578213 CASKIN1Q8WXD9 1431 aa35.48■■■■□ 3.27
PSMD11-206ENST00000578213 MAPKBP1O60336 1514 aa35.47■■■■□ 3.27
PSMD11-206ENST00000578213 NPM1P06748 294 aaKnown RBP eCLIP35.47■■■■□ 3.27
PSMD11-206ENST00000578213 VPS8Q8N3P4 1428 aa35.41■■■■□ 3.26
PSMD11-206ENST00000578213 LRRIQ1Q96JM4 1722 aa35.4■■■■□ 3.26
PSMD11-206ENST00000578213 ATP10BO94823 1461 aa35.37■■■■□ 3.25
PSMD11-206ENST00000578213 CCDC18Q5T9S5 1454 aa35.35■■■■□ 3.25
PSMD11-206ENST00000578213 EPRSP07814 1512 aaKnown RBP35.35■■■■□ 3.25
PSMD11-206ENST00000578213 ASXL2Q76L83 1435 aa35.28■■■■□ 3.24
PSMD11-206ENST00000578213 CDK13Q14004 1512 aaKnown RBP35.27■■■■□ 3.24
PSMD11-206ENST00000578213 WDR7Q9Y4E6 1490 aa35.25■■■■□ 3.23
PSMD11-206ENST00000578213 ATP1B4Q9UN42 357 aaPredicted RBP35.23■■■■□ 3.23
PSMD11-206ENST00000578213 CFAP43Q8NDM7 1665 aa35.21■■■■□ 3.23
PSMD11-206ENST00000578213 ARID3CA6NKF2 412 aa35.19■■■■□ 3.22
PSMD11-206ENST00000578213 KIF13AQ9H1H9 1805 aa35.19■■■■□ 3.22
PSMD11-206ENST00000578213 DIP2BQ9P265 1576 aa35.18■■■■□ 3.22
PSMD11-206ENST00000578213 ABCC10Q5T3U5 1492 aa35.16■■■■□ 3.22
PSMD11-206ENST00000578213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.16■■■■□ 3.22
PSMD11-206ENST00000578213 HNRNPUL2Q1KMD3 747 aaKnown RBP35.16■■■■□ 3.22
PSMD11-206ENST00000578213 CDK11AQ9UQ88 783 aaPredicted RBP35.13■■■■□ 3.21
PSMD11-206ENST00000578213 MAP3K1Q13233 1512 aa35.12■■■■□ 3.21
PSMD11-206ENST00000578213 GLI2P10070 1586 aa35.12■■■■□ 3.21
PSMD11-206ENST00000578213 TIAM1Q13009 1591 aa35.1■■■■□ 3.21
PSMD11-206ENST00000578213 PLEKHD1A6NEE1 506 aa35.09■■■■□ 3.21
PSMD11-206ENST00000578213 TROQ12816 1431 aaPredicted RBP35.05■■■■□ 3.2
PSMD11-206ENST00000578213 KIF14Q15058 1648 aa35.02■■■■□ 3.2
PSMD11-206ENST00000578213 ABCA9Q8IUA7 1624 aa35.01■■■■□ 3.19
PSMD11-206ENST00000578213 MAGI3Q5TCQ9 1506 aa35■■■■□ 3.19
PSMD11-206ENST00000578213 EHBP1L1Q8N3D4 1523 aa35■■■■□ 3.19
PSMD11-206ENST00000578213 MAP3K4Q9Y6R4 1608 aa34.99■■■■□ 3.19
PSMD11-206ENST00000578213 TRHP20396 242 aaPredicted RBP34.94■■■■□ 3.18
PSMD11-206ENST00000578213 FAM69CQ0P6D2 419 aa34.94■■■■□ 3.18
PSMD11-206ENST00000578213 MTUS2Q5JR59 1369 aa34.93■■■■□ 3.18
PSMD11-206ENST00000578213 APLP2Q06481 763 aa34.93■■■■□ 3.18
PSMD11-206ENST00000578213 KCNH8Q96L42 1107 aa34.91■■■■□ 3.18
PSMD11-206ENST00000578213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.9■■■■□ 3.18
PSMD11-206ENST00000578213 LRRC9Q6ZRR7 1453 aa34.89■■■■□ 3.18
PSMD11-206ENST00000578213 TSPOAP1O95153 1857 aa34.88■■■■□ 3.17
PSMD11-206ENST00000578213 TTC37Q6PGP7 1564 aa34.87■■■■□ 3.17
PSMD11-206ENST00000578213 SUPT6HQ7KZ85 1726 aaKnown RBP34.87■■■■□ 3.17
PSMD11-206ENST00000578213 MYO5CQ9NQX4 1742 aa34.86■■■■□ 3.17
PSMD11-206ENST00000578213 PPRC1Q5VV67 1664 aaKnown RBP34.83■■■■□ 3.17
PSMD11-206ENST00000578213 CD109Q6YHK3 1445 aa34.8■■■■□ 3.16
PSMD11-206ENST00000578213 ARAP3Q8WWN8 1544 aa34.77■■■■□ 3.16
PSMD11-206ENST00000578213 CDC42BPAQ5VT25 1732 aa34.76■■■■□ 3.16
PSMD11-206ENST00000578213 TEX14Q8IWB6 1497 aa34.76■■■■□ 3.15
PSMD11-206ENST00000578213 PREX2Q70Z35 1606 aa34.74■■■■□ 3.15
PSMD11-206ENST00000578213 ITSN2Q9NZM3 1697 aa34.73■■■■□ 3.15
PSMD11-206ENST00000578213 CFAP74Q9C0B2 1584 aa34.73■■■■□ 3.15
PSMD11-206ENST00000578213 NCOA2Q15596 1464 aa34.7■■■■□ 3.15
PSMD11-206ENST00000578213 CDC42BPBQ9Y5S2 1711 aa34.69■■■■□ 3.14
PSMD11-206ENST00000578213 KANK4Q5T7N3 995 aaPredicted RBP34.69■■■■□ 3.14
PSMD11-206ENST00000578213 PLCH2O75038 1416 aa34.67■■■■□ 3.14
PSMD11-206ENST00000578213 NEO1Q92859 1461 aa34.62■■■■□ 3.13
PSMD11-206ENST00000578213 CCNB3Q8WWL7 1395 aa34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms