RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ANP32CO43423 234 aa19.34■□□□□ 0.69
NDEL1-204ENST00000578172 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
NDEL1-204ENST00000578172 FOXD1Q16676 465 aa19.27■□□□□ 0.68
NDEL1-204ENST00000578172 FBLN2P98095 1184 aa19.27■□□□□ 0.68
NDEL1-204ENST00000578172 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
NDEL1-204ENST00000578172 CUX1P39880 1505 aa19.24■□□□□ 0.67
NDEL1-204ENST00000578172 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
NDEL1-204ENST00000578172 IGF1RP08069 1367 aa19.24■□□□□ 0.67
NDEL1-204ENST00000578172 TDRD9Q8NDG6 1382 aaKnown RBP19.23■□□□□ 0.67
NDEL1-204ENST00000578172 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
NDEL1-204ENST00000578172 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
NDEL1-204ENST00000578172 ZNF777Q9ULD5 760 aaPredicted RBP19.21■□□□□ 0.67
NDEL1-204ENST00000578172 PHLDB1Q86UU1 1377 aa19.21■□□□□ 0.67
NDEL1-204ENST00000578172 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
NDEL1-204ENST00000578172 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
NDEL1-204ENST00000578172 RAD54L2Q9Y4B4 1467 aa19.18■□□□□ 0.66
NDEL1-204ENST00000578172 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
NDEL1-204ENST00000578172 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
NDEL1-204ENST00000578172 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
NDEL1-204ENST00000578172 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
NDEL1-204ENST00000578172 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
NDEL1-204ENST00000578172 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
NDEL1-204ENST00000578172 TSHZ2Q9NRE2 1034 aa19.08■□□□□ 0.64
NDEL1-204ENST00000578172 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
NDEL1-204ENST00000578172 NESP48681 1621 aa19.06■□□□□ 0.64
NDEL1-204ENST00000578172 NCAPD3P42695 1498 aa19.05■□□□□ 0.64
NDEL1-204ENST00000578172 SALL2Q9Y467 1007 aaPredicted RBP19.03■□□□□ 0.64
NDEL1-204ENST00000578172 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
NDEL1-204ENST00000578172 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
NDEL1-204ENST00000578172 CFTRP13569 1480 aa19.02■□□□□ 0.63
NDEL1-204ENST00000578172 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
NDEL1-204ENST00000578172 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
NDEL1-204ENST00000578172 ERICH3Q5RHP9 1530 aa18.97■□□□□ 0.63
NDEL1-204ENST00000578172 LRRC9Q6ZRR7 1453 aa18.96■□□□□ 0.63
NDEL1-204ENST00000578172 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
NDEL1-204ENST00000578172 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
NDEL1-204ENST00000578172 HSPA5P11021 654 aaKnown RBP18.95■□□□□ 0.62
NDEL1-204ENST00000578172 MRS2Q9HD23 443 aa18.94■□□□□ 0.62
NDEL1-204ENST00000578172 SLC4A1APQ9BWU0 796 aaKnown RBP18.93■□□□□ 0.62
NDEL1-204ENST00000578172 EIF4G2P78344 907 aaKnown RBP eCLIP18.89■□□□□ 0.61
NDEL1-204ENST00000578172 ZNF644Q9H582 1327 aaPredicted RBP18.87■□□□□ 0.61
NDEL1-204ENST00000578172 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
NDEL1-204ENST00000578172 CCDC184Q52MB2 194 aa18.86■□□□□ 0.61
NDEL1-204ENST00000578172 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
NDEL1-204ENST00000578172 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
NDEL1-204ENST00000578172 TIAM1Q13009 1591 aa18.83■□□□□ 0.61
NDEL1-204ENST00000578172 CDK11AQ9UQ88 783 aaPredicted RBP18.82■□□□□ 0.6
NDEL1-204ENST00000578172 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
NDEL1-204ENST00000578172 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
NDEL1-204ENST00000578172 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
NDEL1-204ENST00000578172 CCDC18Q5T9S5 1454 aa18.8■□□□□ 0.6
NDEL1-204ENST00000578172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
NDEL1-204ENST00000578172 PCF11O94913 1555 aaKnown RBP18.78■□□□□ 0.6
NDEL1-204ENST00000578172 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
NDEL1-204ENST00000578172 FGD6Q6ZV73 1430 aa18.77■□□□□ 0.6
NDEL1-204ENST00000578172 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.59
NDEL1-204ENST00000578172 RGL3Q3MIN7 710 aa18.76■□□□□ 0.59
NDEL1-204ENST00000578172 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
NDEL1-204ENST00000578172 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-204ENST00000578172 BCL11AQ9H165 835 aa18.74■□□□□ 0.59
NDEL1-204ENST00000578172 FMN1Q68DA7 1419 aa18.74■□□□□ 0.59
NDEL1-204ENST00000578172 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
NDEL1-204ENST00000578172 PTPRKQ15262 1439 aa18.73■□□□□ 0.59
NDEL1-204ENST00000578172 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
NDEL1-204ENST00000578172 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
NDEL1-204ENST00000578172 WASHC2AQ641Q2 1341 aa18.73■□□□□ 0.59
NDEL1-204ENST00000578172 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.59
NDEL1-204ENST00000578172 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
NDEL1-204ENST00000578172 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
NDEL1-204ENST00000578172 PDS5BQ9NTI5 1447 aa18.7■□□□□ 0.58
NDEL1-204ENST00000578172 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
NDEL1-204ENST00000578172 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
NDEL1-204ENST00000578172 NCOA2Q15596 1464 aa18.67■□□□□ 0.58
NDEL1-204ENST00000578172 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
NDEL1-204ENST00000578172 TIMELESSQ9UNS1 1208 aa18.66■□□□□ 0.58
NDEL1-204ENST00000578172 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
NDEL1-204ENST00000578172 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
NDEL1-204ENST00000578172 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
NDEL1-204ENST00000578172 NBR1Q14596 966 aa18.65■□□□□ 0.58
NDEL1-204ENST00000578172 TMC1Q8TDI8 760 aa18.64■□□□□ 0.57
NDEL1-204ENST00000578172 PKD2Q13563 968 aa18.63■□□□□ 0.57
NDEL1-204ENST00000578172 MYOM3Q5VTT5 1437 aa18.6■□□□□ 0.57
NDEL1-204ENST00000578172 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
NDEL1-204ENST00000578172 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.57
NDEL1-204ENST00000578172 NAIPQ13075 1403 aa18.58■□□□□ 0.57
NDEL1-204ENST00000578172 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
NDEL1-204ENST00000578172 PRKRIP1Q9H875 184 aaPredicted RBP18.57■□□□□ 0.56
NDEL1-204ENST00000578172 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
NDEL1-204ENST00000578172 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
NDEL1-204ENST00000578172 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
NDEL1-204ENST00000578172 TSPY4P0CV99 314 aa18.54■□□□□ 0.56
NDEL1-204ENST00000578172 TSPY10P0CW01 314 aa18.54■□□□□ 0.56
NDEL1-204ENST00000578172 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.563e-7■■■■□ 24.5
NDEL1-204ENST00000578172 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.55
NDEL1-204ENST00000578172 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
NDEL1-204ENST00000578172 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
NDEL1-204ENST00000578172 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
NDEL1-204ENST00000578172 KIF7Q2M1P5 1343 aa18.5■□□□□ 0.55
NDEL1-204ENST00000578172 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
NDEL1-204ENST00000578172 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms