RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 PRG4Q92954 1404 aaPredicted RBP17.4■□□□□ 0.38
SUPT6H-204ENST00000577939 CARMIL1Q5VZK9 1371 aa17.39■□□□□ 0.37
SUPT6H-204ENST00000577939 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
SUPT6H-204ENST00000577939 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
SUPT6H-204ENST00000577939 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
SUPT6H-204ENST00000577939 JPH4Q96JJ6 628 aa17.34■□□□□ 0.37
SUPT6H-204ENST00000577939 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
SUPT6H-204ENST00000577939 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
SUPT6H-204ENST00000577939 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
SUPT6H-204ENST00000577939 KIF13AQ9H1H9 1805 aa17.23■□□□□ 0.35
SUPT6H-204ENST00000577939 MAPKBP1O60336 1514 aa17.21■□□□□ 0.35
SUPT6H-204ENST00000577939 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
SUPT6H-204ENST00000577939 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
SUPT6H-204ENST00000577939 NPM1P06748 294 aaKnown RBP eCLIP17.19■□□□□ 0.34
SUPT6H-204ENST00000577939 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
SUPT6H-204ENST00000577939 EEA1Q15075 1411 aa17.18■□□□□ 0.34
SUPT6H-204ENST00000577939 PTPRGP23470 1445 aa17.16■□□□□ 0.34
SUPT6H-204ENST00000577939 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
SUPT6H-204ENST00000577939 PRXQ9BXM0 1461 aa17.15■□□□□ 0.34
SUPT6H-204ENST00000577939 DISP1Q96F81 1524 aa17.14■□□□□ 0.33
SUPT6H-204ENST00000577939 DIP2BQ9P265 1576 aa17.13■□□□□ 0.33
SUPT6H-204ENST00000577939 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
SUPT6H-204ENST00000577939 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
SUPT6H-204ENST00000577939 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
SUPT6H-204ENST00000577939 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
SUPT6H-204ENST00000577939 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
SUPT6H-204ENST00000577939 ZCCHC11Q5TAX3 1644 aaKnown RBP17.04■□□□□ 0.32
SUPT6H-204ENST00000577939 TSPOAP1O95153 1857 aa17.04■□□□□ 0.32
SUPT6H-204ENST00000577939 KIF21BO75037 1637 aa17.03■□□□□ 0.32
SUPT6H-204ENST00000577939 PLB1Q6P1J6 1458 aa17.03■□□□□ 0.32
SUPT6H-204ENST00000577939 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
SUPT6H-204ENST00000577939 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
SUPT6H-204ENST00000577939 KDM5BQ9UGL1 1544 aa17■□□□□ 0.31
SUPT6H-204ENST00000577939 SAMD9Q5K651 1589 aa16.99■□□□□ 0.31
SUPT6H-204ENST00000577939 FAM69CQ0P6D2 419 aa16.99■□□□□ 0.31
SUPT6H-204ENST00000577939 GLI2P10070 1586 aa16.98■□□□□ 0.31
SUPT6H-204ENST00000577939 ASXL2Q76L83 1435 aa16.97■□□□□ 0.31
SUPT6H-204ENST00000577939 ABCA8O94911 1581 aa16.96■□□□□ 0.31
SUPT6H-204ENST00000577939 KDM6BO15054 1643 aa16.96■□□□□ 0.3
SUPT6H-204ENST00000577939 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
SUPT6H-204ENST00000577939 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
SUPT6H-204ENST00000577939 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
SUPT6H-204ENST00000577939 RAPGEF6Q8TEU7 1601 aa16.9■□□□□ 0.3
SUPT6H-204ENST00000577939 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
SUPT6H-204ENST00000577939 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
SUPT6H-204ENST00000577939 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
SUPT6H-204ENST00000577939 TEX14Q8IWB6 1497 aa16.88■□□□□ 0.29
SUPT6H-204ENST00000577939 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
SUPT6H-204ENST00000577939 FHOD3Q2V2M9 1422 aa16.79■□□□□ 0.28
SUPT6H-204ENST00000577939 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
SUPT6H-204ENST00000577939 ABCA9Q8IUA7 1624 aa16.75■□□□□ 0.27
SUPT6H-204ENST00000577939 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
SUPT6H-204ENST00000577939 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
SUPT6H-204ENST00000577939 ATP10BO94823 1461 aa16.73■□□□□ 0.27
SUPT6H-204ENST00000577939 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
SUPT6H-204ENST00000577939 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
SUPT6H-204ENST00000577939 RANGAP1P46060 587 aaPredicted RBP16.73■□□□□ 0.27
SUPT6H-204ENST00000577939 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
SUPT6H-204ENST00000577939 CD109Q6YHK3 1445 aa16.72■□□□□ 0.27
SUPT6H-204ENST00000577939 FMN1Q68DA7 1419 aa16.71■□□□□ 0.27
SUPT6H-204ENST00000577939 CFAP74Q9C0B2 1584 aa16.69■□□□□ 0.26
SUPT6H-204ENST00000577939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
SUPT6H-204ENST00000577939 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
SUPT6H-204ENST00000577939 ARID3CA6NKF2 412 aa16.67■□□□□ 0.26
SUPT6H-204ENST00000577939 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
SUPT6H-204ENST00000577939 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
SUPT6H-204ENST00000577939 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
SUPT6H-204ENST00000577939 PHLDB1Q86UU1 1377 aa16.63■□□□□ 0.25
SUPT6H-204ENST00000577939 NEO1Q92859 1461 aa16.61■□□□□ 0.25
SUPT6H-204ENST00000577939 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
SUPT6H-204ENST00000577939 CDK13Q14004 1512 aaKnown RBP16.6■□□□□ 0.25
SUPT6H-204ENST00000577939 KIF14Q15058 1648 aa16.59■□□□□ 0.25
SUPT6H-204ENST00000577939 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
SUPT6H-204ENST00000577939 PLEKHD1A6NEE1 506 aa16.58■□□□□ 0.24
SUPT6H-204ENST00000577939 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.24
SUPT6H-204ENST00000577939 PCF11O94913 1555 aaKnown RBP16.57■□□□□ 0.24
SUPT6H-204ENST00000577939 CCDC18Q5T9S5 1454 aa16.57■□□□□ 0.24
SUPT6H-204ENST00000577939 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
SUPT6H-204ENST00000577939 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
SUPT6H-204ENST00000577939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.24
SUPT6H-204ENST00000577939 CLIP1P30622 1438 aa16.54■□□□□ 0.24
SUPT6H-204ENST00000577939 CDK11AQ9UQ88 783 aaPredicted RBP16.54■□□□□ 0.24
SUPT6H-204ENST00000577939 ADGRL1O94910 1474 aa16.53■□□□□ 0.24
SUPT6H-204ENST00000577939 FYCO1Q9BQS8 1478 aa16.53■□□□□ 0.24
SUPT6H-204ENST00000577939 RICTORQ6R327 1708 aa16.51■□□□□ 0.23
SUPT6H-204ENST00000577939 FANCAO15360 1455 aa16.51■□□□□ 0.23
SUPT6H-204ENST00000577939 ATP1B4Q9UN42 357 aaPredicted RBP16.51■□□□□ 0.23
SUPT6H-204ENST00000577939 CASKIN1Q8WXD9 1431 aa16.5■□□□□ 0.23
SUPT6H-204ENST00000577939 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
SUPT6H-204ENST00000577939 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
SUPT6H-204ENST00000577939 TROQ12816 1431 aaPredicted RBP16.48■□□□□ 0.23
SUPT6H-204ENST00000577939 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
SUPT6H-204ENST00000577939 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
SUPT6H-204ENST00000577939 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
SUPT6H-204ENST00000577939 PREX2Q70Z35 1606 aa16.44■□□□□ 0.22
SUPT6H-204ENST00000577939 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
SUPT6H-204ENST00000577939 KDM4FA0A1W2PPD8 638 aa16.42■□□□□ 0.22
SUPT6H-204ENST00000577939 PLCH2O75038 1416 aa16.42■□□□□ 0.22
SUPT6H-204ENST00000577939 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
SUPT6H-204ENST00000577939 CDC42BPAQ5VT25 1732 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms