RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
CCL13-202ENST00000577681 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
CCL13-202ENST00000577681 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
CCL13-202ENST00000577681 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
CCL13-202ENST00000577681 ADAMTS12P58397 1594 aa13.39□□□□□ -0.27
CCL13-202ENST00000577681 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
CCL13-202ENST00000577681 CHD1O14646 1710 aa13.34□□□□□ -0.27
CCL13-202ENST00000577681 PRXQ9BXM0 1461 aa13.34□□□□□ -0.27
CCL13-202ENST00000577681 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
CCL13-202ENST00000577681 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
CCL13-202ENST00000577681 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
CCL13-202ENST00000577681 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
CCL13-202ENST00000577681 NUP160Q12769 1436 aa13.29□□□□□ -0.28
CCL13-202ENST00000577681 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
CCL13-202ENST00000577681 KIF21BO75037 1637 aa13.27□□□□□ -0.29
CCL13-202ENST00000577681 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
CCL13-202ENST00000577681 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
CCL13-202ENST00000577681 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
CCL13-202ENST00000577681 KCNA4P22459 653 aa13.22□□□□□ -0.29
CCL13-202ENST00000577681 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
CCL13-202ENST00000577681 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
CCL13-202ENST00000577681 SHROOM2Q13796 1616 aa13.18□□□□□ -0.3
CCL13-202ENST00000577681 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
CCL13-202ENST00000577681 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
CCL13-202ENST00000577681 FAM9AQ8IZU1 332 aaPredicted RBP13.16□□□□□ -0.3
CCL13-202ENST00000577681 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
CCL13-202ENST00000577681 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
CCL13-202ENST00000577681 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
CCL13-202ENST00000577681 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
CCL13-202ENST00000577681 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
CCL13-202ENST00000577681 TNIKQ9UKE5 1360 aa13.07□□□□□ -0.32
CCL13-202ENST00000577681 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
CCL13-202ENST00000577681 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
CCL13-202ENST00000577681 SAMD9Q5K651 1589 aa13.03□□□□□ -0.32
CCL13-202ENST00000577681 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
CCL13-202ENST00000577681 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
CCL13-202ENST00000577681 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
CCL13-202ENST00000577681 UBTFP17480 764 aaKnown RBP13.01□□□□□ -0.33
CCL13-202ENST00000577681 KIAA0556O60303 1618 aa13.01□□□□□ -0.33
CCL13-202ENST00000577681 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
CCL13-202ENST00000577681 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
CCL13-202ENST00000577681 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
CCL13-202ENST00000577681 ARHGAP35Q9NRY4 1499 aa12.94□□□□□ -0.34
CCL13-202ENST00000577681 LOC105371045A0A1W2PR82 267 aa12.94□□□□□ -0.34
CCL13-202ENST00000577681 PTPRGP23470 1445 aa12.92□□□□□ -0.34
CCL13-202ENST00000577681 UHRF1BP1LA0JNW5 1464 aa12.91□□□□□ -0.34
CCL13-202ENST00000577681 CLIP1P30622 1438 aa12.9□□□□□ -0.34
CCL13-202ENST00000577681 CEP162Q5TB80 1403 aa12.89□□□□□ -0.35
CCL13-202ENST00000577681 ABCA8O94911 1581 aa12.88□□□□□ -0.35
CCL13-202ENST00000577681 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
CCL13-202ENST00000577681 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
CCL13-202ENST00000577681 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
CCL13-202ENST00000577681 FAM69CQ0P6D2 419 aa12.86□□□□□ -0.35
CCL13-202ENST00000577681 FHOD3Q2V2M9 1422 aa12.86□□□□□ -0.35
CCL13-202ENST00000577681 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
CCL13-202ENST00000577681 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
CCL13-202ENST00000577681 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCL13-202ENST00000577681 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
CCL13-202ENST00000577681 PLB1Q6P1J6 1458 aa12.82□□□□□ -0.36
CCL13-202ENST00000577681 KDM5BQ9UGL1 1544 aa12.82□□□□□ -0.36
CCL13-202ENST00000577681 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
CCL13-202ENST00000577681 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
CCL13-202ENST00000577681 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
CCL13-202ENST00000577681 KDM4FA0A1W2PPD8 638 aa12.79□□□□□ -0.36
CCL13-202ENST00000577681 RANGAP1P46060 587 aaPredicted RBP12.78□□□□□ -0.36
CCL13-202ENST00000577681 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
CCL13-202ENST00000577681 FYCO1Q9BQS8 1478 aa12.78□□□□□ -0.36
CCL13-202ENST00000577681 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
CCL13-202ENST00000577681 MAPKBP1O60336 1514 aa12.77□□□□□ -0.37
CCL13-202ENST00000577681 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
CCL13-202ENST00000577681 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
CCL13-202ENST00000577681 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
CCL13-202ENST00000577681 ATP10BO94823 1461 aa12.75□□□□□ -0.37
CCL13-202ENST00000577681 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
CCL13-202ENST00000577681 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
CCL13-202ENST00000577681 LRRIQ1Q96JM4 1722 aa12.73□□□□□ -0.37
CCL13-202ENST00000577681 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
CCL13-202ENST00000577681 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
CCL13-202ENST00000577681 CCDC18Q5T9S5 1454 aa12.72□□□□□ -0.37
CCL13-202ENST00000577681 KDM6BO15054 1643 aa12.7□□□□□ -0.38
CCL13-202ENST00000577681 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
CCL13-202ENST00000577681 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
CCL13-202ENST00000577681 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
CCL13-202ENST00000577681 ASXL2Q76L83 1435 aa12.68□□□□□ -0.38
CCL13-202ENST00000577681 WDR7Q9Y4E6 1490 aa12.66□□□□□ -0.38
CCL13-202ENST00000577681 GLI2P10070 1586 aa12.66□□□□□ -0.38
CCL13-202ENST00000577681 CFAP43Q8NDM7 1665 aa12.65□□□□□ -0.38
CCL13-202ENST00000577681 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
CCL13-202ENST00000577681 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
CCL13-202ENST00000577681 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
CCL13-202ENST00000577681 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
CCL13-202ENST00000577681 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
CCL13-202ENST00000577681 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
CCL13-202ENST00000577681 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
CCL13-202ENST00000577681 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
CCL13-202ENST00000577681 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
CCL13-202ENST00000577681 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
CCL13-202ENST00000577681 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
CCL13-202ENST00000577681 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
CCL13-202ENST00000577681 LRRC9Q6ZRR7 1453 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms