RNA–Protein interactions for RNA: ENST00000577573.1

LINC02003-201, Transcript of long intergenic non-protein coding RNA 2003, humanhuman

TSL 2 BASIC

Gene LINC02003, Length 1,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02003-201ENST00000577573 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
LINC02003-201ENST00000577573 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
LINC02003-201ENST00000577573 APLP2Q06481 763 aa18.04■□□□□ 0.48
LINC02003-201ENST00000577573 FBLN2P98095 1184 aa18.03■□□□□ 0.48
LINC02003-201ENST00000577573 SYNJ2O15056 1496 aa18.03■□□□□ 0.48
LINC02003-201ENST00000577573 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.48
LINC02003-201ENST00000577573 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.47
LINC02003-201ENST00000577573 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.47
LINC02003-201ENST00000577573 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.47
LINC02003-201ENST00000577573 ADAMTS12P58397 1594 aa18.01■□□□□ 0.47
LINC02003-201ENST00000577573 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
LINC02003-201ENST00000577573 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
LINC02003-201ENST00000577573 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
LINC02003-201ENST00000577573 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
LINC02003-201ENST00000577573 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
LINC02003-201ENST00000577573 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
LINC02003-201ENST00000577573 IGF1RP08069 1367 aa17.89■□□□□ 0.45
LINC02003-201ENST00000577573 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
LINC02003-201ENST00000577573 ARHGAP35Q9NRY4 1499 aa17.85■□□□□ 0.45
LINC02003-201ENST00000577573 NUP160Q12769 1436 aa17.84■□□□□ 0.45
LINC02003-201ENST00000577573 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
LINC02003-201ENST00000577573 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
LINC02003-201ENST00000577573 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
LINC02003-201ENST00000577573 CARMIL1Q5VZK9 1371 aa17.81■□□□□ 0.44
LINC02003-201ENST00000577573 CUL7Q14999 1698 aa17.8■□□□□ 0.44
LINC02003-201ENST00000577573 RRBP1Q9P2E9 1410 aaKnown RBP17.79■□□□□ 0.44
LINC02003-201ENST00000577573 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
LINC02003-201ENST00000577573 DIEXFQ68CQ4 756 aaKnown RBP17.76■□□□□ 0.43
LINC02003-201ENST00000577573 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
LINC02003-201ENST00000577573 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
LINC02003-201ENST00000577573 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
LINC02003-201ENST00000577573 KANK4Q5T7N3 995 aaPredicted RBP17.73■□□□□ 0.43
LINC02003-201ENST00000577573 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
LINC02003-201ENST00000577573 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
LINC02003-201ENST00000577573 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
LINC02003-201ENST00000577573 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
LINC02003-201ENST00000577573 DHX57Q6P158 1386 aaKnown RBP17.63■□□□□ 0.41
LINC02003-201ENST00000577573 CFAP43Q8NDM7 1665 aa17.62■□□□□ 0.41
LINC02003-201ENST00000577573 KIAA0586Q9BVV6 1533 aa17.61■□□□□ 0.41
LINC02003-201ENST00000577573 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
LINC02003-201ENST00000577573 PRG4Q92954 1404 aaPredicted RBP17.6■□□□□ 0.41
LINC02003-201ENST00000577573 CTTNBP2Q8WZ74 1663 aa17.6■□□□□ 0.41
LINC02003-201ENST00000577573 JPH4Q96JJ6 628 aa17.58■□□□□ 0.4
LINC02003-201ENST00000577573 FYCO1Q9BQS8 1478 aa17.56■□□□□ 0.4
LINC02003-201ENST00000577573 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
LINC02003-201ENST00000577573 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
LINC02003-201ENST00000577573 ACIN1Q9UKV3 1341 aaKnown RBP17.54■□□□□ 0.4
LINC02003-201ENST00000577573 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
LINC02003-201ENST00000577573 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
LINC02003-201ENST00000577573 CASKIN1Q8WXD9 1431 aa17.53■□□□□ 0.4
LINC02003-201ENST00000577573 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
LINC02003-201ENST00000577573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
LINC02003-201ENST00000577573 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
LINC02003-201ENST00000577573 SAMD9Q5K651 1589 aa17.45■□□□□ 0.38
LINC02003-201ENST00000577573 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
LINC02003-201ENST00000577573 SETD5Q9C0A6 1442 aa17.43■□□□□ 0.38
LINC02003-201ENST00000577573 UGGT2Q9NYU1 1516 aa17.43■□□□□ 0.38
LINC02003-201ENST00000577573 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
LINC02003-201ENST00000577573 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
LINC02003-201ENST00000577573 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
LINC02003-201ENST00000577573 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
LINC02003-201ENST00000577573 KIAA0556O60303 1618 aa17.4■□□□□ 0.38
LINC02003-201ENST00000577573 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.37
LINC02003-201ENST00000577573 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
LINC02003-201ENST00000577573 P3H3Q8IVL6 736 aa17.39■□□□□ 0.37
LINC02003-201ENST00000577573 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
LINC02003-201ENST00000577573 PTPRGP23470 1445 aa17.35■□□□□ 0.37
LINC02003-201ENST00000577573 ITGAEP38570 1179 aa17.34■□□□□ 0.37
LINC02003-201ENST00000577573 MIER1Q8N108 512 aa17.34■□□□□ 0.37
LINC02003-201ENST00000577573 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
LINC02003-201ENST00000577573 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
LINC02003-201ENST00000577573 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
LINC02003-201ENST00000577573 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
LINC02003-201ENST00000577573 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
LINC02003-201ENST00000577573 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
LINC02003-201ENST00000577573 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
LINC02003-201ENST00000577573 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
LINC02003-201ENST00000577573 PELP1Q8IZL8 1130 aaKnown RBP17.28■□□□□ 0.36
LINC02003-201ENST00000577573 CCDC18Q5T9S5 1454 aa17.27■□□□□ 0.36
LINC02003-201ENST00000577573 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.35
LINC02003-201ENST00000577573 ABCC2Q92887 1545 aa17.27■□□□□ 0.35
LINC02003-201ENST00000577573 UHRF1BP1LA0JNW5 1464 aa17.26■□□□□ 0.35
LINC02003-201ENST00000577573 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
LINC02003-201ENST00000577573 DIP2BQ9P265 1576 aa17.24■□□□□ 0.35
LINC02003-201ENST00000577573 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
LINC02003-201ENST00000577573 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
LINC02003-201ENST00000577573 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
LINC02003-201ENST00000577573 HECW1Q76N89 1606 aa17.22■□□□□ 0.35
LINC02003-201ENST00000577573 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC02003-201ENST00000577573 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
LINC02003-201ENST00000577573 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
LINC02003-201ENST00000577573 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.34
LINC02003-201ENST00000577573 ABCA8O94911 1581 aa17.2■□□□□ 0.34
LINC02003-201ENST00000577573 HFM1A2PYH4 1435 aa17.2■□□□□ 0.34
LINC02003-201ENST00000577573 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
LINC02003-201ENST00000577573 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
LINC02003-201ENST00000577573 ASXL2Q76L83 1435 aa17.15■□□□□ 0.34
LINC02003-201ENST00000577573 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
LINC02003-201ENST00000577573 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
LINC02003-201ENST00000577573 FAM69CQ0P6D2 419 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms