RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 CSRNP3Q8WYN3 585 aa32.42■■■□□ 2.78
SPNS3-206ENST00000576069 JPH4Q96JJ6 628 aa32.42■■■□□ 2.78
SPNS3-206ENST00000576069 SHROOM2Q13796 1616 aa32.38■■■□□ 2.77
SPNS3-206ENST00000576069 PRXQ9BXM0 1461 aa32.38■■■□□ 2.77
SPNS3-206ENST00000576069 CYB5RLQ6IPT4 315 aa32.38■■■□□ 2.77
SPNS3-206ENST00000576069 ARAP1Q96P48 1450 aa32.35■■■□□ 2.77
SPNS3-206ENST00000576069 PRG4Q92954 1404 aaPredicted RBP32.3■■■□□ 2.76
SPNS3-206ENST00000576069 ERCC6L2Q5T890 1561 aa32.25■■■□□ 2.75
SPNS3-206ENST00000576069 FAM9AQ8IZU1 332 aaPredicted RBP32.25■■■□□ 2.75
SPNS3-206ENST00000576069 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
SPNS3-206ENST00000576069 CARMIL2Q6F5E8 1435 aa32.09■■■□□ 2.73
SPNS3-206ENST00000576069 UGGT2Q9NYU1 1516 aa32.05■■■□□ 2.72
SPNS3-206ENST00000576069 CTTNBP2Q8WZ74 1663 aa32.03■■■□□ 2.72
SPNS3-206ENST00000576069 KIF21BO75037 1637 aa32.02■■■□□ 2.72
SPNS3-206ENST00000576069 DISP1Q96F81 1524 aa31.98■■■□□ 2.71
SPNS3-206ENST00000576069 TNIKQ9UKE5 1360 aa31.97■■■□□ 2.71
SPNS3-206ENST00000576069 PTPRGP23470 1445 aa31.94■■■□□ 2.7
SPNS3-206ENST00000576069 GOLGA3Q08378 1498 aa31.91■■■□□ 2.7
SPNS3-206ENST00000576069 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
SPNS3-206ENST00000576069 UBTFP17480 764 aaKnown RBP31.83■■■□□ 2.69
SPNS3-206ENST00000576069 TTBK1Q5TCY1 1321 aaPredicted RBP31.82■■■□□ 2.68
SPNS3-206ENST00000576069 EHMT2Q96KQ7 1210 aa31.78■■■□□ 2.68
SPNS3-206ENST00000576069 NPM1P06748 294 aaKnown RBP eCLIP31.76■■■□□ 2.67
SPNS3-206ENST00000576069 ADCY10Q96PN6 1610 aa31.72■■■□□ 2.67
SPNS3-206ENST00000576069 UACAQ9BZF9 1416 aa31.72■■■□□ 2.67
SPNS3-206ENST00000576069 UHRF1BP1LA0JNW5 1464 aa31.7■■■□□ 2.66
SPNS3-206ENST00000576069 SAMD9Q5K651 1589 aa31.69■■■□□ 2.66
SPNS3-206ENST00000576069 P3H3Q8IVL6 736 aa31.69■■■□□ 2.66
SPNS3-206ENST00000576069 TRHP20396 242 aaPredicted RBP31.68■■■□□ 2.66
SPNS3-206ENST00000576069 RANGAP1P46060 587 aaPredicted RBP31.68■■■□□ 2.66
SPNS3-206ENST00000576069 ABCC2Q92887 1545 aa31.63■■■□□ 2.65
SPNS3-206ENST00000576069 EFCAB5A4FU69 1503 aa31.59■■■□□ 2.65
SPNS3-206ENST00000576069 PLB1Q6P1J6 1458 aa31.58■■■□□ 2.65
SPNS3-206ENST00000576069 MAPKBP1O60336 1514 aa31.56■■■□□ 2.64
SPNS3-206ENST00000576069 ABCA8O94911 1581 aa31.54■■■□□ 2.64
SPNS3-206ENST00000576069 KDM5BQ9UGL1 1544 aa31.53■■■□□ 2.64
SPNS3-206ENST00000576069 FHOD3Q2V2M9 1422 aa31.52■■■□□ 2.64
SPNS3-206ENST00000576069 ARHGAP35Q9NRY4 1499 aa31.46■■■□□ 2.63
SPNS3-206ENST00000576069 ABCC10Q5T3U5 1492 aa31.43■■■□□ 2.62
SPNS3-206ENST00000576069 ASXL2Q76L83 1435 aa31.41■■■□□ 2.62
SPNS3-206ENST00000576069 ZCCHC11Q5TAX3 1644 aaKnown RBP31.38■■■□□ 2.61
SPNS3-206ENST00000576069 FAM69CQ0P6D2 419 aa31.38■■■□□ 2.61
SPNS3-206ENST00000576069 RAPGEF6Q8TEU7 1601 aa31.36■■■□□ 2.61
SPNS3-206ENST00000576069 FMN1Q68DA7 1419 aa31.35■■■□□ 2.61
SPNS3-206ENST00000576069 ATP10BO94823 1461 aa31.33■■■□□ 2.61
SPNS3-206ENST00000576069 DIP2BQ9P265 1576 aa31.31■■■□□ 2.6
SPNS3-206ENST00000576069 LOC105371045A0A1W2PR82 267 aa31.31■■■□□ 2.6
SPNS3-206ENST00000576069 CLIP1P30622 1438 aa31.31■■■□□ 2.6
SPNS3-206ENST00000576069 KIF13AQ9H1H9 1805 aa31.29■■■□□ 2.6
SPNS3-206ENST00000576069 NUP153P49790 1475 aaKnown RBP31.28■■■□□ 2.6
SPNS3-206ENST00000576069 ARID3CA6NKF2 412 aa31.27■■■□□ 2.6
SPNS3-206ENST00000576069 WDR7Q9Y4E6 1490 aa31.26■■■□□ 2.59
SPNS3-206ENST00000576069 EPRSP07814 1512 aaKnown RBP31.23■■■□□ 2.59
SPNS3-206ENST00000576069 GLI2P10070 1586 aa31.22■■■□□ 2.59
SPNS3-206ENST00000576069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.21■■■□□ 2.59
SPNS3-206ENST00000576069 HNRNPUL2Q1KMD3 747 aaKnown RBP31.21■■■□□ 2.59
SPNS3-206ENST00000576069 CEP162Q5TB80 1403 aa31.17■■■□□ 2.58
SPNS3-206ENST00000576069 KCNH8Q96L42 1107 aa31.15■■■□□ 2.58
SPNS3-206ENST00000576069 ATP1B4Q9UN42 357 aaPredicted RBP31.15■■■□□ 2.58
SPNS3-206ENST00000576069 PLEKHD1A6NEE1 506 aa31.12■■■□□ 2.57
SPNS3-206ENST00000576069 HECW1Q76N89 1606 aa31.11■■■□□ 2.57
SPNS3-206ENST00000576069 CASKIN1Q8WXD9 1431 aa31.1■■■□□ 2.57
SPNS3-206ENST00000576069 CDK13Q14004 1512 aaKnown RBP31.03■■■□□ 2.56
SPNS3-206ENST00000576069 CDK11AQ9UQ88 783 aaPredicted RBP31.02■■■□□ 2.56
SPNS3-206ENST00000576069 MAP3K4Q9Y6R4 1608 aa31.02■■■□□ 2.56
SPNS3-206ENST00000576069 FYCO1Q9BQS8 1478 aa31■■■□□ 2.55
SPNS3-206ENST00000576069 CD109Q6YHK3 1445 aa30.99■■■□□ 2.55
SPNS3-206ENST00000576069 PCF11O94913 1555 aaKnown RBP30.99■■■□□ 2.55
SPNS3-206ENST00000576069 TSPOAP1O95153 1857 aa30.97■■■□□ 2.55
SPNS3-206ENST00000576069 CCDC18Q5T9S5 1454 aa30.95■■■□□ 2.55
SPNS3-206ENST00000576069 CFAP43Q8NDM7 1665 aa30.95■■■□□ 2.55
SPNS3-206ENST00000576069 TEX14Q8IWB6 1497 aa30.94■■■□□ 2.54
SPNS3-206ENST00000576069 PPRC1Q5VV67 1664 aaKnown RBP30.92■■■□□ 2.54
SPNS3-206ENST00000576069 MAGI3Q5TCQ9 1506 aa30.92■■■□□ 2.54
SPNS3-206ENST00000576069 ABCA9Q8IUA7 1624 aa30.91■■■□□ 2.54
SPNS3-206ENST00000576069 LRRIQ1Q96JM4 1722 aa30.88■■■□□ 2.53
SPNS3-206ENST00000576069 TROQ12816 1431 aaPredicted RBP30.85■■■□□ 2.53
SPNS3-206ENST00000576069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.81■■■□□ 2.52
SPNS3-206ENST00000576069 VPS8Q8N3P4 1428 aa30.81■■■□□ 2.52
SPNS3-206ENST00000576069 KDM6BO15054 1643 aa30.78■■■□□ 2.52
SPNS3-206ENST00000576069 PHLDB1Q86UU1 1377 aa30.77■■■□□ 2.52
SPNS3-206ENST00000576069 KIF14Q15058 1648 aa30.72■■■□□ 2.51
SPNS3-206ENST00000576069 TTC37Q6PGP7 1564 aa30.71■■■□□ 2.51
SPNS3-206ENST00000576069 COL17A1Q9UMD9 1497 aaPredicted RBP30.71■■■□□ 2.51
SPNS3-206ENST00000576069 NEO1Q92859 1461 aa30.7■■■□□ 2.51
SPNS3-206ENST00000576069 PLCH2O75038 1416 aa30.69■■■□□ 2.5
SPNS3-206ENST00000576069 ARAP3Q8WWN8 1544 aa30.66■■■□□ 2.5
SPNS3-206ENST00000576069 MTUS2Q5JR59 1369 aa30.66■■■□□ 2.5
SPNS3-206ENST00000576069 FANCAO15360 1455 aa30.63■■■□□ 2.49
SPNS3-206ENST00000576069 EFCAB2Q5VUJ9 269 aa30.61■■■□□ 2.49
SPNS3-206ENST00000576069 AKNAQ7Z591 1439 aa30.6■■■□□ 2.49
SPNS3-206ENST00000576069 CFAP74Q9C0B2 1584 aa30.58■■■□□ 2.49
SPNS3-206ENST00000576069 MAP3K1Q13233 1512 aa30.57■■■□□ 2.48
SPNS3-206ENST00000576069 TIAM1Q13009 1591 aa30.56■■■□□ 2.48
SPNS3-206ENST00000576069 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
SPNS3-206ENST00000576069 EHBP1L1Q8N3D4 1523 aa30.55■■■□□ 2.48
SPNS3-206ENST00000576069 RAPGEF3O95398 923 aa30.51■■■□□ 2.47
SPNS3-206ENST00000576069 APLP2Q06481 763 aa30.51■■■□□ 2.47
SPNS3-206ENST00000576069 ARHGAP5Q13017 1502 aa30.5■■■□□ 2.47
SPNS3-206ENST00000576069 DENND4BO75064 1496 aaPredicted RBP30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms