RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
LITAF-217ENST00000575426 KIAA0586Q9BVV6 1533 aa25.28■■□□□ 1.64
LITAF-217ENST00000575426 SHROOM2Q13796 1616 aa25.28■■□□□ 1.64
LITAF-217ENST00000575426 JPH4Q96JJ6 628 aa25.27■■□□□ 1.64
LITAF-217ENST00000575426 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
LITAF-217ENST00000575426 CYB5RLQ6IPT4 315 aa25.23■■□□□ 1.63
LITAF-217ENST00000575426 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
LITAF-217ENST00000575426 CTTNBP2Q8WZ74 1663 aa25.19■■□□□ 1.62
LITAF-217ENST00000575426 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
LITAF-217ENST00000575426 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
LITAF-217ENST00000575426 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
LITAF-217ENST00000575426 KIF21BO75037 1637 aa25.08■■□□□ 1.61
LITAF-217ENST00000575426 CARMIL2Q6F5E8 1435 aa25.06■■□□□ 1.6
LITAF-217ENST00000575426 UGGT2Q9NYU1 1516 aa25.01■■□□□ 1.59
LITAF-217ENST00000575426 EHMT2Q96KQ7 1210 aa24.97■■□□□ 1.59
LITAF-217ENST00000575426 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
LITAF-217ENST00000575426 GOLGA3Q08378 1498 aa24.94■■□□□ 1.58
LITAF-217ENST00000575426 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
LITAF-217ENST00000575426 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
LITAF-217ENST00000575426 DISP1Q96F81 1524 aa24.93■■□□□ 1.58
LITAF-217ENST00000575426 PTPRGP23470 1445 aa24.92■■□□□ 1.58
LITAF-217ENST00000575426 KIAA0556O60303 1618 aa24.91■■□□□ 1.58
LITAF-217ENST00000575426 RANGAP1P46060 587 aaPredicted RBP24.85■■□□□ 1.57
LITAF-217ENST00000575426 NPM1P06748 294 aaKnown RBP eCLIP24.82■■□□□ 1.56
LITAF-217ENST00000575426 P3H3Q8IVL6 736 aa24.79■■□□□ 1.56
LITAF-217ENST00000575426 SAMD9Q5K651 1589 aa24.78■■□□□ 1.56
LITAF-217ENST00000575426 ADCY10Q96PN6 1610 aa24.78■■□□□ 1.56
LITAF-217ENST00000575426 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
LITAF-217ENST00000575426 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
LITAF-217ENST00000575426 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
LITAF-217ENST00000575426 UHRF1BP1LA0JNW5 1464 aa24.7■■□□□ 1.54
LITAF-217ENST00000575426 ABCC2Q92887 1545 aa24.69■■□□□ 1.54
LITAF-217ENST00000575426 PLB1Q6P1J6 1458 aa24.64■■□□□ 1.53
LITAF-217ENST00000575426 FHOD3Q2V2M9 1422 aa24.63■■□□□ 1.53
LITAF-217ENST00000575426 ABCA8O94911 1581 aa24.63■■□□□ 1.53
LITAF-217ENST00000575426 MAPKBP1O60336 1514 aa24.6■■□□□ 1.53
LITAF-217ENST00000575426 ZCCHC11Q5TAX3 1644 aaKnown RBP24.57■■□□□ 1.52
LITAF-217ENST00000575426 RAPGEF6Q8TEU7 1601 aa24.57■■□□□ 1.52
LITAF-217ENST00000575426 KDM5BQ9UGL1 1544 aa24.57■■□□□ 1.52
LITAF-217ENST00000575426 ARHGAP35Q9NRY4 1499 aa24.57■■□□□ 1.52
LITAF-217ENST00000575426 KIF13AQ9H1H9 1805 aa24.52■■□□□ 1.52
LITAF-217ENST00000575426 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
LITAF-217ENST00000575426 FMN1Q68DA7 1419 aa24.5■■□□□ 1.51
LITAF-217ENST00000575426 CLIP1P30622 1438 aa24.49■■□□□ 1.51
LITAF-217ENST00000575426 ASXL2Q76L83 1435 aa24.49■■□□□ 1.51
LITAF-217ENST00000575426 ABCC10Q5T3U5 1492 aa24.47■■□□□ 1.51
LITAF-217ENST00000575426 ARID3CA6NKF2 412 aa24.47■■□□□ 1.51
LITAF-217ENST00000575426 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
LITAF-217ENST00000575426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.45■■□□□ 1.5
LITAF-217ENST00000575426 HNRNPUL2Q1KMD3 747 aaKnown RBP24.45■■□□□ 1.5
LITAF-217ENST00000575426 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
LITAF-217ENST00000575426 DIP2BQ9P265 1576 aa24.44■■□□□ 1.5
LITAF-217ENST00000575426 ATP10BO94823 1461 aa24.43■■□□□ 1.5
LITAF-217ENST00000575426 NUP153P49790 1475 aaKnown RBP24.41■■□□□ 1.5
LITAF-217ENST00000575426 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
LITAF-217ENST00000575426 HECW1Q76N89 1606 aa24.39■■□□□ 1.49
LITAF-217ENST00000575426 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
LITAF-217ENST00000575426 TSPOAP1O95153 1857 aa24.37■■□□□ 1.49
LITAF-217ENST00000575426 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
LITAF-217ENST00000575426 EPRSP07814 1512 aaKnown RBP24.34■■□□□ 1.49
LITAF-217ENST00000575426 GLI2P10070 1586 aa24.33■■□□□ 1.49
LITAF-217ENST00000575426 PLEKHD1A6NEE1 506 aa24.31■■□□□ 1.48
LITAF-217ENST00000575426 CASKIN1Q8WXD9 1431 aa24.29■■□□□ 1.48
LITAF-217ENST00000575426 PCF11O94913 1555 aaKnown RBP24.29■■□□□ 1.48
LITAF-217ENST00000575426 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
LITAF-217ENST00000575426 CDK11AQ9UQ88 783 aaPredicted RBP24.26■■□□□ 1.47
LITAF-217ENST00000575426 LRRIQ1Q96JM4 1722 aa24.25■■□□□ 1.47
LITAF-217ENST00000575426 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
LITAF-217ENST00000575426 MAP3K4Q9Y6R4 1608 aa24.24■■□□□ 1.47
LITAF-217ENST00000575426 CFAP43Q8NDM7 1665 aa24.24■■□□□ 1.47
LITAF-217ENST00000575426 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
LITAF-217ENST00000575426 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
LITAF-217ENST00000575426 PPRC1Q5VV67 1664 aaKnown RBP24.17■■□□□ 1.46
LITAF-217ENST00000575426 ABCA9Q8IUA7 1624 aa24.16■■□□□ 1.46
LITAF-217ENST00000575426 TEX14Q8IWB6 1497 aa24.15■■□□□ 1.46
LITAF-217ENST00000575426 MAGI3Q5TCQ9 1506 aa24.1■■□□□ 1.45
LITAF-217ENST00000575426 TROQ12816 1431 aaPredicted RBP24.1■■□□□ 1.45
LITAF-217ENST00000575426 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
LITAF-217ENST00000575426 KDM6BO15054 1643 aa24.07■■□□□ 1.44
LITAF-217ENST00000575426 KIF14Q15058 1648 aa24.07■■□□□ 1.44
LITAF-217ENST00000575426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.07■■□□□ 1.44
LITAF-217ENST00000575426 TTC37Q6PGP7 1564 aa24.03■■□□□ 1.44
LITAF-217ENST00000575426 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
LITAF-217ENST00000575426 MTUS2Q5JR59 1369 aa23.99■■□□□ 1.43
LITAF-217ENST00000575426 PHLDB1Q86UU1 1377 aa23.97■■□□□ 1.43
LITAF-217ENST00000575426 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
LITAF-217ENST00000575426 APLP2Q06481 763 aa23.96■■□□□ 1.43
LITAF-217ENST00000575426 NEO1Q92859 1461 aa23.94■■□□□ 1.42
LITAF-217ENST00000575426 TIAM1Q13009 1591 aa23.94■■□□□ 1.42
LITAF-217ENST00000575426 PLCH2O75038 1416 aa23.93■■□□□ 1.42
LITAF-217ENST00000575426 EHBP1L1Q8N3D4 1523 aa23.92■■□□□ 1.42
LITAF-217ENST00000575426 FANCAO15360 1455 aa23.92■■□□□ 1.42
LITAF-217ENST00000575426 EFCAB2Q5VUJ9 269 aa23.89■■□□□ 1.41
LITAF-217ENST00000575426 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
LITAF-217ENST00000575426 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
LITAF-217ENST00000575426 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
LITAF-217ENST00000575426 CDC42BPAQ5VT25 1732 aa23.88■■□□□ 1.41
LITAF-217ENST00000575426 CDC42BPBQ9Y5S2 1711 aa23.88■■□□□ 1.41
LITAF-217ENST00000575426 ARHGAP5Q13017 1502 aa23.88■■□□□ 1.41
LITAF-217ENST00000575426 AKNAQ7Z591 1439 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms