RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 GRIN2AQ12879 1464 aa21.93■■□□□ 1.1
ERCC4-207ENST00000575156 CTTNBP2Q8WZ74 1663 aa21.9■■□□□ 1.1
ERCC4-207ENST00000575156 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
ERCC4-207ENST00000575156 ARAP1Q96P48 1450 aa21.86■■□□□ 1.09
ERCC4-207ENST00000575156 P3H3Q8IVL6 736 aa21.82■■□□□ 1.08
ERCC4-207ENST00000575156 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
ERCC4-207ENST00000575156 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
ERCC4-207ENST00000575156 IQGAP2Q13576 1575 aa21.78■■□□□ 1.08
ERCC4-207ENST00000575156 KIAA0586Q9BVV6 1533 aa21.78■■□□□ 1.08
ERCC4-207ENST00000575156 NUP160Q12769 1436 aa21.78■■□□□ 1.08
ERCC4-207ENST00000575156 CHD1O14646 1710 aa21.75■■□□□ 1.07
ERCC4-207ENST00000575156 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
ERCC4-207ENST00000575156 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
ERCC4-207ENST00000575156 EFCAB5A4FU69 1503 aa21.72■■□□□ 1.07
ERCC4-207ENST00000575156 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
ERCC4-207ENST00000575156 UGGT2Q9NYU1 1516 aa21.67■■□□□ 1.06
ERCC4-207ENST00000575156 JPH4Q96JJ6 628 aa21.64■■□□□ 1.05
ERCC4-207ENST00000575156 DISP1Q96F81 1524 aa21.63■■□□□ 1.05
ERCC4-207ENST00000575156 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
ERCC4-207ENST00000575156 KIAA0556O60303 1618 aa21.57■■□□□ 1.04
ERCC4-207ENST00000575156 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
ERCC4-207ENST00000575156 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
ERCC4-207ENST00000575156 APLP2Q06481 763 aa21.54■■□□□ 1.04
ERCC4-207ENST00000575156 ATP1B4Q9UN42 357 aaPredicted RBP21.53■■□□□ 1.04
ERCC4-207ENST00000575156 CLASP1Q7Z460 1538 aa21.51■■□□□ 1.03
ERCC4-207ENST00000575156 PRG4Q92954 1404 aaPredicted RBP21.51■■□□□ 1.03
ERCC4-207ENST00000575156 CASKIN1Q8WXD9 1431 aa21.5■■□□□ 1.03
ERCC4-207ENST00000575156 CARMIL2Q6F5E8 1435 aa21.49■■□□□ 1.03
ERCC4-207ENST00000575156 KANK4Q5T7N3 995 aaPredicted RBP21.48■■□□□ 1.03
ERCC4-207ENST00000575156 FYCO1Q9BQS8 1478 aa21.48■■□□□ 1.03
ERCC4-207ENST00000575156 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
ERCC4-207ENST00000575156 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
ERCC4-207ENST00000575156 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
ERCC4-207ENST00000575156 TRIM26Q12899 539 aaPredicted RBP21.43■■□□□ 1.02
ERCC4-207ENST00000575156 OSCARQ8IYS5 282 aa21.42■■□□□ 1.02
ERCC4-207ENST00000575156 TIAM1Q13009 1591 aa21.41■■□□□ 1.02
ERCC4-207ENST00000575156 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
ERCC4-207ENST00000575156 PLB1Q6P1J6 1458 aa21.38■■□□□ 1.01
ERCC4-207ENST00000575156 MAP3K1Q13233 1512 aa21.38■■□□□ 1.01
ERCC4-207ENST00000575156 LRRIQ1Q96JM4 1722 aa21.37■■□□□ 1.01
ERCC4-207ENST00000575156 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
ERCC4-207ENST00000575156 PTPRGP23470 1445 aa21.34■■□□□ 1.01
ERCC4-207ENST00000575156 LRRC9Q6ZRR7 1453 aa21.33■■□□□ 1.01
ERCC4-207ENST00000575156 HECW1Q76N89 1606 aa21.33■■□□□ 1
ERCC4-207ENST00000575156 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
ERCC4-207ENST00000575156 NUP153P49790 1475 aaKnown RBP21.32■■□□□ 1
ERCC4-207ENST00000575156 EPRSP07814 1512 aaKnown RBP21.31■■□□□ 1
ERCC4-207ENST00000575156 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
ERCC4-207ENST00000575156 ABCA8O94911 1581 aa21.28■■□□□ 1
ERCC4-207ENST00000575156 CCDC18Q5T9S5 1454 aa21.27■■□□□ 1
ERCC4-207ENST00000575156 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
ERCC4-207ENST00000575156 MTUS2Q5JR59 1369 aa21.24■□□□□ 0.99
ERCC4-207ENST00000575156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
ERCC4-207ENST00000575156 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
ERCC4-207ENST00000575156 UACAQ9BZF9 1416 aa21.2■□□□□ 0.99
ERCC4-207ENST00000575156 PHLDB1Q86UU1 1377 aa21.18■□□□□ 0.98
ERCC4-207ENST00000575156 ATP10BO94823 1461 aa21.17■□□□□ 0.98
ERCC4-207ENST00000575156 EHBP1L1Q8N3D4 1523 aa21.16■□□□□ 0.98
ERCC4-207ENST00000575156 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
ERCC4-207ENST00000575156 NCOA2Q15596 1464 aa21.11■□□□□ 0.97
ERCC4-207ENST00000575156 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
ERCC4-207ENST00000575156 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
ERCC4-207ENST00000575156 SUPT6HQ7KZ85 1726 aaKnown RBP21.08■□□□□ 0.96
ERCC4-207ENST00000575156 UHRF1BP1LA0JNW5 1464 aa21.07■□□□□ 0.96
ERCC4-207ENST00000575156 ARHGEF11O15085 1522 aa21.07■□□□□ 0.96
ERCC4-207ENST00000575156 TROQ12816 1431 aaPredicted RBP21.07■□□□□ 0.96
ERCC4-207ENST00000575156 CCNB3Q8WWL7 1395 aa21.06■□□□□ 0.96
ERCC4-207ENST00000575156 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
ERCC4-207ENST00000575156 ADCY10Q96PN6 1610 aa21.04■□□□□ 0.96
ERCC4-207ENST00000575156 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
ERCC4-207ENST00000575156 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
ERCC4-207ENST00000575156 KIF14Q15058 1648 aa21■□□□□ 0.95
ERCC4-207ENST00000575156 FGD6Q6ZV73 1430 aa21■□□□□ 0.95
ERCC4-207ENST00000575156 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
ERCC4-207ENST00000575156 FAM50AQ14320 339 aaKnown RBP20.98■□□□□ 0.95
ERCC4-207ENST00000575156 RIMBP3CA6NJZ7 1639 aa20.97■□□□□ 0.95
ERCC4-207ENST00000575156 RIMBP3BA6NNM3 1639 aa20.97■□□□□ 0.95
ERCC4-207ENST00000575156 RIMBP3Q9UFD9 1639 aa20.97■□□□□ 0.95
ERCC4-207ENST00000575156 ITGAEP38570 1179 aa20.95■□□□□ 0.94
ERCC4-207ENST00000575156 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
ERCC4-207ENST00000575156 ABCC10Q5T3U5 1492 aa20.91■□□□□ 0.94
ERCC4-207ENST00000575156 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
ERCC4-207ENST00000575156 GPATCH8Q9UKJ3 1502 aaKnown RBP20.89■□□□□ 0.94
ERCC4-207ENST00000575156 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
ERCC4-207ENST00000575156 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.87■□□□□ 0.93
ERCC4-207ENST00000575156 ZNF644Q9H582 1327 aaPredicted RBP20.87■□□□□ 0.93
ERCC4-207ENST00000575156 MIA2Q96PC5 1412 aa20.86■□□□□ 0.93
ERCC4-207ENST00000575156 CFDP1Q9UEE9 299 aaPredicted RBP20.84■□□□□ 0.93
ERCC4-207ENST00000575156 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
ERCC4-207ENST00000575156 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
ERCC4-207ENST00000575156 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.83■□□□□ 0.93
ERCC4-207ENST00000575156 ASXL2Q76L83 1435 aa20.83■□□□□ 0.93
ERCC4-207ENST00000575156 TTC37Q6PGP7 1564 aa20.83■□□□□ 0.92
ERCC4-207ENST00000575156 WDR7Q9Y4E6 1490 aa20.83■□□□□ 0.92
ERCC4-207ENST00000575156 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
ERCC4-207ENST00000575156 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
ERCC4-207ENST00000575156 ZNF777Q9ULD5 760 aaPredicted RBP20.81■□□□□ 0.92
ERCC4-207ENST00000575156 ITSN2Q9NZM3 1697 aa20.79■□□□□ 0.92
ERCC4-207ENST00000575156 CAMSAP2Q08AD1 1489 aa20.76■□□□□ 0.91
ERCC4-207ENST00000575156 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms