RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 CTTNBP2Q8WZ74 1663 aa19.15■□□□□ 0.66
PRPF8-212ENST00000575116 KIAA0586Q9BVV6 1533 aa19.13■□□□□ 0.65
PRPF8-212ENST00000575116 CEP170Q5SW79 1584 aa19.11■□□□□ 0.65
PRPF8-212ENST00000575116 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
PRPF8-212ENST00000575116 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
PRPF8-212ENST00000575116 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
PRPF8-212ENST00000575116 CLIP1P30622 1438 aa19.03■□□□□ 0.64
PRPF8-212ENST00000575116 UGGT2Q9NYU1 1516 aa19■□□□□ 0.63
PRPF8-212ENST00000575116 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
PRPF8-212ENST00000575116 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
PRPF8-212ENST00000575116 EFCAB5A4FU69 1503 aa18.98■□□□□ 0.63
PRPF8-212ENST00000575116 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
PRPF8-212ENST00000575116 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
PRPF8-212ENST00000575116 SAMD9Q5K651 1589 aa18.94■□□□□ 0.62
PRPF8-212ENST00000575116 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
PRPF8-212ENST00000575116 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
PRPF8-212ENST00000575116 DISP1Q96F81 1524 aa18.9■□□□□ 0.62
PRPF8-212ENST00000575116 PRG4Q92954 1404 aaPredicted RBP18.88■□□□□ 0.61
PRPF8-212ENST00000575116 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
PRPF8-212ENST00000575116 KIAA0556O60303 1618 aa18.87■□□□□ 0.61
PRPF8-212ENST00000575116 P3H3Q8IVL6 736 aa18.86■□□□□ 0.61
PRPF8-212ENST00000575116 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.61
PRPF8-212ENST00000575116 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.6
PRPF8-212ENST00000575116 FMN1Q68DA7 1419 aa18.82■□□□□ 0.6
PRPF8-212ENST00000575116 PTPRGP23470 1445 aa18.74■□□□□ 0.59
PRPF8-212ENST00000575116 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
PRPF8-212ENST00000575116 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
PRPF8-212ENST00000575116 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
PRPF8-212ENST00000575116 PCF11O94913 1555 aaKnown RBP18.66■□□□□ 0.58
PRPF8-212ENST00000575116 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
PRPF8-212ENST00000575116 ARHGEF11O15085 1522 aa18.65■□□□□ 0.58
PRPF8-212ENST00000575116 RAPGEF6Q8TEU7 1601 aa18.65■□□□□ 0.58
PRPF8-212ENST00000575116 APLP2Q06481 763 aa18.65■□□□□ 0.58
PRPF8-212ENST00000575116 ABCA8O94911 1581 aa18.64■□□□□ 0.58
PRPF8-212ENST00000575116 UACAQ9BZF9 1416 aa18.64■□□□□ 0.57
PRPF8-212ENST00000575116 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
PRPF8-212ENST00000575116 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
PRPF8-212ENST00000575116 MAP3K1Q13233 1512 aa18.63■□□□□ 0.57
PRPF8-212ENST00000575116 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
PRPF8-212ENST00000575116 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
PRPF8-212ENST00000575116 RIMBP3CA6NJZ7 1639 aa18.6■□□□□ 0.57
PRPF8-212ENST00000575116 RIMBP3BA6NNM3 1639 aa18.6■□□□□ 0.57
PRPF8-212ENST00000575116 RIMBP3Q9UFD9 1639 aa18.6■□□□□ 0.57
PRPF8-212ENST00000575116 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
PRPF8-212ENST00000575116 NUP153P49790 1475 aaKnown RBP18.58■□□□□ 0.57
PRPF8-212ENST00000575116 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
PRPF8-212ENST00000575116 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
PRPF8-212ENST00000575116 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PRPF8-212ENST00000575116 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
PRPF8-212ENST00000575116 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
PRPF8-212ENST00000575116 CDK11AQ9UQ88 783 aaPredicted RBP18.51■□□□□ 0.55
PRPF8-212ENST00000575116 ATP10BO94823 1461 aa18.51■□□□□ 0.55
PRPF8-212ENST00000575116 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
PRPF8-212ENST00000575116 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
PRPF8-212ENST00000575116 CDK13Q14004 1512 aaKnown RBP18.49■□□□□ 0.55
PRPF8-212ENST00000575116 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
PRPF8-212ENST00000575116 LRRC9Q6ZRR7 1453 aa18.47■□□□□ 0.55
PRPF8-212ENST00000575116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
PRPF8-212ENST00000575116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
PRPF8-212ENST00000575116 KANK4Q5T7N3 995 aaPredicted RBP18.47■□□□□ 0.55
PRPF8-212ENST00000575116 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
PRPF8-212ENST00000575116 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
PRPF8-212ENST00000575116 MTUS2Q5JR59 1369 aa18.44■□□□□ 0.54
PRPF8-212ENST00000575116 PLEKHD1A6NEE1 506 aa18.44■□□□□ 0.54
PRPF8-212ENST00000575116 NPM1P06748 294 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRPF8-212ENST00000575116 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
PRPF8-212ENST00000575116 EHBP1L1Q8N3D4 1523 aa18.42■□□□□ 0.54
PRPF8-212ENST00000575116 PPARGC1BQ86YN6 1023 aaKnown RBP18.41■□□□□ 0.54
PRPF8-212ENST00000575116 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
PRPF8-212ENST00000575116 MAGI3Q5TCQ9 1506 aa18.39■□□□□ 0.54
PRPF8-212ENST00000575116 SUPT6HQ7KZ85 1726 aaKnown RBP18.35■□□□□ 0.53
PRPF8-212ENST00000575116 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
PRPF8-212ENST00000575116 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
PRPF8-212ENST00000575116 ASXL2Q76L83 1435 aa18.31■□□□□ 0.52
PRPF8-212ENST00000575116 MAPKBP1O60336 1514 aa18.29■□□□□ 0.52
PRPF8-212ENST00000575116 KIF14Q15058 1648 aa18.29■□□□□ 0.52
PRPF8-212ENST00000575116 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
PRPF8-212ENST00000575116 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
PRPF8-212ENST00000575116 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
PRPF8-212ENST00000575116 ABCC10Q5T3U5 1492 aa18.25■□□□□ 0.51
PRPF8-212ENST00000575116 CCNB3Q8WWL7 1395 aa18.24■□□□□ 0.51
PRPF8-212ENST00000575116 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
PRPF8-212ENST00000575116 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRPF8-212ENST00000575116 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
PRPF8-212ENST00000575116 RRBP1Q9P2E9 1410 aaKnown RBP18.21■□□□□ 0.51
PRPF8-212ENST00000575116 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
PRPF8-212ENST00000575116 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
PRPF8-212ENST00000575116 FGD6Q6ZV73 1430 aa18.18■□□□□ 0.5
PRPF8-212ENST00000575116 ABCA9Q8IUA7 1624 aa18.18■□□□□ 0.5
PRPF8-212ENST00000575116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.17■□□□□ 0.5
PRPF8-212ENST00000575116 GLI2P10070 1586 aa18.16■□□□□ 0.5
PRPF8-212ENST00000575116 TTC37Q6PGP7 1564 aa18.16■□□□□ 0.5
PRPF8-212ENST00000575116 CDC42BPAQ5VT25 1732 aa18.15■□□□□ 0.5
PRPF8-212ENST00000575116 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
PRPF8-212ENST00000575116 PLCH2O75038 1416 aa18.15■□□□□ 0.5
PRPF8-212ENST00000575116 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
PRPF8-212ENST00000575116 MYO5CQ9NQX4 1742 aa18.13■□□□□ 0.49
PRPF8-212ENST00000575116 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
PRPF8-212ENST00000575116 PREX2Q70Z35 1606 aa18.12■□□□□ 0.49
PRPF8-212ENST00000575116 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms