RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
CACNA1A-203ENST00000573891 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
CACNA1A-203ENST00000573891 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CACNA1A-203ENST00000573891 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
CACNA1A-203ENST00000573891 GRIN2AQ12879 1464 aa10.91□□□□□ -0.66
CACNA1A-203ENST00000573891 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
CACNA1A-203ENST00000573891 NUP160Q12769 1436 aa10.89□□□□□ -0.67
CACNA1A-203ENST00000573891 ADAMTS12P58397 1594 aa10.88□□□□□ -0.67
CACNA1A-203ENST00000573891 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
CACNA1A-203ENST00000573891 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
CACNA1A-203ENST00000573891 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-203ENST00000573891 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
CACNA1A-203ENST00000573891 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-203ENST00000573891 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
CACNA1A-203ENST00000573891 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
CACNA1A-203ENST00000573891 SHROOM2Q13796 1616 aa10.84□□□□□ -0.67
CACNA1A-203ENST00000573891 ERICH3Q5RHP9 1530 aa10.83□□□□□ -0.68
CACNA1A-203ENST00000573891 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
CACNA1A-203ENST00000573891 PRG4Q92954 1404 aaPredicted RBP10.77□□□□□ -0.68
CACNA1A-203ENST00000573891 JPH4Q96JJ6 628 aa10.75□□□□□ -0.69
CACNA1A-203ENST00000573891 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
CACNA1A-203ENST00000573891 KIF13AQ9H1H9 1805 aa10.7□□□□□ -0.7
CACNA1A-203ENST00000573891 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
CACNA1A-203ENST00000573891 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
CACNA1A-203ENST00000573891 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
CACNA1A-203ENST00000573891 KIAA0586Q9BVV6 1533 aa10.68□□□□□ -0.7
CACNA1A-203ENST00000573891 IGF1RP08069 1367 aa10.67□□□□□ -0.7
CACNA1A-203ENST00000573891 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
CACNA1A-203ENST00000573891 ADCY10Q96PN6 1610 aa10.66□□□□□ -0.7
CACNA1A-203ENST00000573891 NPM1P06748 294 aaKnown RBP eCLIP10.65□□□□□ -0.7
CACNA1A-203ENST00000573891 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
CACNA1A-203ENST00000573891 KIF27Q86VH2 1401 aa10.65□□□□□ -0.7
CACNA1A-203ENST00000573891 DIP2BQ9P265 1576 aa10.65□□□□□ -0.71
CACNA1A-203ENST00000573891 MAPK8IP2Q13387 824 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-203ENST00000573891 CUL7Q14999 1698 aa10.63□□□□□ -0.71
CACNA1A-203ENST00000573891 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
CACNA1A-203ENST00000573891 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
CACNA1A-203ENST00000573891 PTPRGP23470 1445 aa10.58□□□□□ -0.72
CACNA1A-203ENST00000573891 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
CACNA1A-203ENST00000573891 KDM6BO15054 1643 aa10.57□□□□□ -0.72
CACNA1A-203ENST00000573891 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
CACNA1A-203ENST00000573891 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
CACNA1A-203ENST00000573891 CARMIL2Q6F5E8 1435 aa10.56□□□□□ -0.72
CACNA1A-203ENST00000573891 KDM4FA0A1W2PPD8 638 aa10.54□□□□□ -0.72
CACNA1A-203ENST00000573891 IQGAP2Q13576 1575 aa10.53□□□□□ -0.72
CACNA1A-203ENST00000573891 UHRF1BP1LA0JNW5 1464 aa10.53□□□□□ -0.72
CACNA1A-203ENST00000573891 PLB1Q6P1J6 1458 aa10.53□□□□□ -0.72
CACNA1A-203ENST00000573891 ASXL2Q76L83 1435 aa10.52□□□□□ -0.73
CACNA1A-203ENST00000573891 DISP1Q96F81 1524 aa10.52□□□□□ -0.73
CACNA1A-203ENST00000573891 GLI2P10070 1586 aa10.52□□□□□ -0.73
CACNA1A-203ENST00000573891 TTBK1Q5TCY1 1321 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-203ENST00000573891 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
CACNA1A-203ENST00000573891 TSPOAP1O95153 1857 aa10.5□□□□□ -0.73
CACNA1A-203ENST00000573891 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CACNA1A-203ENST00000573891 KDM5BQ9UGL1 1544 aa10.48□□□□□ -0.73
CACNA1A-203ENST00000573891 DMRT2Q9Y5R5 561 aa10.48□□□□□ -0.73
CACNA1A-203ENST00000573891 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-203ENST00000573891 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
CACNA1A-203ENST00000573891 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
CACNA1A-203ENST00000573891 COL17A1Q9UMD9 1497 aaPredicted RBP10.46□□□□□ -0.74
CACNA1A-203ENST00000573891 SLC4A2P04920 1241 aa10.45□□□□□ -0.74
CACNA1A-203ENST00000573891 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
CACNA1A-203ENST00000573891 MAP3K4Q9Y6R4 1608 aa10.44□□□□□ -0.74
CACNA1A-203ENST00000573891 TEX14Q8IWB6 1497 aa10.42□□□□□ -0.74
CACNA1A-203ENST00000573891 HOXD11P31277 338 aaPredicted RBP10.42□□□□□ -0.74
CACNA1A-203ENST00000573891 ZCCHC11Q5TAX3 1644 aaKnown RBP10.42□□□□□ -0.74
CACNA1A-203ENST00000573891 ADGRL1O94910 1474 aa10.42□□□□□ -0.74
CACNA1A-203ENST00000573891 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
CACNA1A-203ENST00000573891 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
CACNA1A-203ENST00000573891 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
CACNA1A-203ENST00000573891 ABCA8O94911 1581 aa10.37□□□□□ -0.75
CACNA1A-203ENST00000573891 MAGI3Q5TCQ9 1506 aa10.37□□□□□ -0.75
CACNA1A-203ENST00000573891 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
CACNA1A-203ENST00000573891 FKBP8Q14318 412 aa10.35□□□□□ -0.75
CACNA1A-203ENST00000573891 CTTNBP2Q8WZ74 1663 aa10.34□□□□□ -0.75
CACNA1A-203ENST00000573891 CD109Q6YHK3 1445 aa10.34□□□□□ -0.75
CACNA1A-203ENST00000573891 CFAP43Q8NDM7 1665 aa10.33□□□□□ -0.76
CACNA1A-203ENST00000573891 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-203ENST00000573891 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
CACNA1A-203ENST00000573891 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-203ENST00000573891 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
CACNA1A-203ENST00000573891 ARAP3Q8WWN8 1544 aa10.28□□□□□ -0.76
CACNA1A-203ENST00000573891 ATP10BO94823 1461 aa10.28□□□□□ -0.76
CACNA1A-203ENST00000573891 ABCA9Q8IUA7 1624 aa10.25□□□□□ -0.77
CACNA1A-203ENST00000573891 PHLDB1Q86UU1 1377 aa10.25□□□□□ -0.77
CACNA1A-203ENST00000573891 SAMD9Q5K651 1589 aa10.24□□□□□ -0.77
CACNA1A-203ENST00000573891 ARID3CA6NKF2 412 aa10.24□□□□□ -0.77
CACNA1A-203ENST00000573891 KIF21BO75037 1637 aa10.23□□□□□ -0.77
CACNA1A-203ENST00000573891 P3H3Q8IVL6 736 aa10.23□□□□□ -0.77
CACNA1A-203ENST00000573891 FAM9AQ8IZU1 332 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-203ENST00000573891 NEO1Q92859 1461 aa10.22□□□□□ -0.77
CACNA1A-203ENST00000573891 RAPGEF6Q8TEU7 1601 aa10.21□□□□□ -0.78
CACNA1A-203ENST00000573891 NUP153P49790 1475 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-203ENST00000573891 PTPRMP28827 1452 aa10.19□□□□□ -0.78
CACNA1A-203ENST00000573891 RAPGEF3O95398 923 aa10.19□□□□□ -0.78
CACNA1A-203ENST00000573891 ADAMTSL3P82987 1691 aa10.18□□□□□ -0.78
CACNA1A-203ENST00000573891 FRMPD1Q5SYB0 1578 aa10.18□□□□□ -0.78
CACNA1A-203ENST00000573891 EEA1Q15075 1411 aa10.16□□□□□ -0.78
CACNA1A-203ENST00000573891 FHOD3Q2V2M9 1422 aa10.16□□□□□ -0.78
CACNA1A-203ENST00000573891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms