RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 CTTNBP2Q8WZ74 1663 aa36.61■■■■□ 3.45
RAB40B-207ENST00000572603 KIAA0586Q9BVV6 1533 aa36.59■■■■□ 3.45
RAB40B-207ENST00000572603 IQGAP2Q13576 1575 aa36.52■■■■□ 3.44
RAB40B-207ENST00000572603 ARHGEF11O15085 1522 aa36.49■■■■□ 3.43
RAB40B-207ENST00000572603 RIMBP3CA6NJZ7 1639 aa36.48■■■■□ 3.43
RAB40B-207ENST00000572603 RIMBP3BA6NNM3 1639 aa36.48■■■■□ 3.43
RAB40B-207ENST00000572603 RIMBP3Q9UFD9 1639 aa36.48■■■■□ 3.43
RAB40B-207ENST00000572603 GOLGA3Q08378 1498 aa36.45■■■■□ 3.43
RAB40B-207ENST00000572603 ERCC6L2Q5T890 1561 aa36.42■■■■□ 3.42
RAB40B-207ENST00000572603 UGGT2Q9NYU1 1516 aa36.34■■■■□ 3.41
RAB40B-207ENST00000572603 JPH4Q96JJ6 628 aa36.34■■■■□ 3.41
RAB40B-207ENST00000572603 PRG4Q92954 1404 aaPredicted RBP36.31■■■■□ 3.4
RAB40B-207ENST00000572603 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
RAB40B-207ENST00000572603 DISP1Q96F81 1524 aa36.24■■■■□ 3.39
RAB40B-207ENST00000572603 EHMT2Q96KQ7 1210 aa36.23■■■■□ 3.39
RAB40B-207ENST00000572603 KIAA0556O60303 1618 aa36.2■■■■□ 3.39
RAB40B-207ENST00000572603 SAMD9Q5K651 1589 aa36.15■■■■□ 3.38
RAB40B-207ENST00000572603 UBTFP17480 764 aaKnown RBP36.12■■■■□ 3.37
RAB40B-207ENST00000572603 CARMIL2Q6F5E8 1435 aa36.11■■■■□ 3.37
RAB40B-207ENST00000572603 TNIKQ9UKE5 1360 aa36.03■■■■□ 3.36
RAB40B-207ENST00000572603 EFCAB5A4FU69 1503 aa36.02■■■■□ 3.36
RAB40B-207ENST00000572603 LOC105371045A0A1W2PR82 267 aa35.92■■■■□ 3.34
RAB40B-207ENST00000572603 CYB5RLQ6IPT4 315 aa35.92■■■■□ 3.34
RAB40B-207ENST00000572603 ARHGAP35Q9NRY4 1499 aa35.91■■■■□ 3.34
RAB40B-207ENST00000572603 PTPRGP23470 1445 aa35.9■■■■□ 3.34
RAB40B-207ENST00000572603 RANGAP1P46060 587 aaPredicted RBP35.88■■■■□ 3.33
RAB40B-207ENST00000572603 FHOD3Q2V2M9 1422 aa35.85■■■■□ 3.33
RAB40B-207ENST00000572603 ADCY10Q96PN6 1610 aa35.83■■■■□ 3.33
RAB40B-207ENST00000572603 P3H3Q8IVL6 736 aa35.81■■■■□ 3.32
RAB40B-207ENST00000572603 ABCA8O94911 1581 aa35.77■■■■□ 3.32
RAB40B-207ENST00000572603 CLIP1P30622 1438 aa35.77■■■■□ 3.32
RAB40B-207ENST00000572603 CEP162Q5TB80 1403 aa35.76■■■■□ 3.32
RAB40B-207ENST00000572603 TTBK1Q5TCY1 1321 aaPredicted RBP35.75■■■■□ 3.31
RAB40B-207ENST00000572603 ABCC2Q92887 1545 aa35.73■■■■□ 3.31
RAB40B-207ENST00000572603 UHRF1BP1LA0JNW5 1464 aa35.73■■■■□ 3.31
RAB40B-207ENST00000572603 PLB1Q6P1J6 1458 aa35.73■■■■□ 3.31
RAB40B-207ENST00000572603 UACAQ9BZF9 1416 aa35.72■■■■□ 3.31
RAB40B-207ENST00000572603 RAPGEF6Q8TEU7 1601 aa35.66■■■■□ 3.3
RAB40B-207ENST00000572603 FMN1Q68DA7 1419 aa35.57■■■■□ 3.29
RAB40B-207ENST00000572603 KDM5BQ9UGL1 1544 aa35.55■■■■□ 3.28
RAB40B-207ENST00000572603 ZCCHC11Q5TAX3 1644 aaKnown RBP35.54■■■■□ 3.28
RAB40B-207ENST00000572603 PCF11O94913 1555 aaKnown RBP35.52■■■■□ 3.28
RAB40B-207ENST00000572603 NUP153P49790 1475 aaKnown RBP35.51■■■■□ 3.28
RAB40B-207ENST00000572603 MAPKBP1O60336 1514 aa35.47■■■■□ 3.27
RAB40B-207ENST00000572603 HECW1Q76N89 1606 aa35.46■■■■□ 3.27
RAB40B-207ENST00000572603 LRRIQ1Q96JM4 1722 aa35.44■■■■□ 3.26
RAB40B-207ENST00000572603 CASKIN1Q8WXD9 1431 aa35.4■■■■□ 3.26
RAB40B-207ENST00000572603 ATP10BO94823 1461 aa35.39■■■■□ 3.26
RAB40B-207ENST00000572603 FYCO1Q9BQS8 1478 aa35.38■■■■□ 3.25
RAB40B-207ENST00000572603 NPM1P06748 294 aaKnown RBP eCLIP35.34■■■■□ 3.25
RAB40B-207ENST00000572603 EPRSP07814 1512 aaKnown RBP35.32■■■■□ 3.24
RAB40B-207ENST00000572603 CDK13Q14004 1512 aaKnown RBP35.32■■■■□ 3.24
RAB40B-207ENST00000572603 VPS8Q8N3P4 1428 aa35.31■■■■□ 3.24
RAB40B-207ENST00000572603 ASXL2Q76L83 1435 aa35.3■■■■□ 3.24
RAB40B-207ENST00000572603 ARID3CA6NKF2 412 aa35.28■■■■□ 3.24
RAB40B-207ENST00000572603 KIF13AQ9H1H9 1805 aa35.25■■■■□ 3.23
RAB40B-207ENST00000572603 DIP2BQ9P265 1576 aa35.25■■■■□ 3.23
RAB40B-207ENST00000572603 WDR7Q9Y4E6 1490 aa35.22■■■■□ 3.23
RAB40B-207ENST00000572603 CCDC18Q5T9S5 1454 aa35.21■■■■□ 3.23
RAB40B-207ENST00000572603 ABCC10Q5T3U5 1492 aa35.19■■■■□ 3.22
RAB40B-207ENST00000572603 ATP1B4Q9UN42 357 aaPredicted RBP35.15■■■■□ 3.22
RAB40B-207ENST00000572603 CFAP43Q8NDM7 1665 aa35.14■■■■□ 3.22
RAB40B-207ENST00000572603 GLI2P10070 1586 aa35.11■■■■□ 3.21
RAB40B-207ENST00000572603 MAGI3Q5TCQ9 1506 aa35.08■■■■□ 3.21
RAB40B-207ENST00000572603 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.07■■■■□ 3.2
RAB40B-207ENST00000572603 HNRNPUL2Q1KMD3 747 aaKnown RBP35.07■■■■□ 3.2
RAB40B-207ENST00000572603 TIAM1Q13009 1591 aa35.04■■■■□ 3.2
RAB40B-207ENST00000572603 MAP3K4Q9Y6R4 1608 aa35.01■■■■□ 3.19
RAB40B-207ENST00000572603 TROQ12816 1431 aaPredicted RBP34.99■■■■□ 3.19
RAB40B-207ENST00000572603 ABCA9Q8IUA7 1624 aa34.99■■■■□ 3.19
RAB40B-207ENST00000572603 TRHP20396 242 aaPredicted RBP34.98■■■■□ 3.19
RAB40B-207ENST00000572603 KIF14Q15058 1648 aa34.97■■■■□ 3.19
RAB40B-207ENST00000572603 MAP3K1Q13233 1512 aa34.96■■■■□ 3.19
RAB40B-207ENST00000572603 PLEKHD1A6NEE1 506 aa34.96■■■■□ 3.19
RAB40B-207ENST00000572603 FAM69CQ0P6D2 419 aa34.96■■■■□ 3.19
RAB40B-207ENST00000572603 PPRC1Q5VV67 1664 aaKnown RBP34.94■■■■□ 3.18
RAB40B-207ENST00000572603 TTC37Q6PGP7 1564 aa34.92■■■■□ 3.18
RAB40B-207ENST00000572603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.91■■■■□ 3.18
RAB40B-207ENST00000572603 CDK11AQ9UQ88 783 aaPredicted RBP34.91■■■■□ 3.18
RAB40B-207ENST00000572603 EHBP1L1Q8N3D4 1523 aa34.91■■■■□ 3.18
RAB40B-207ENST00000572603 KCNH8Q96L42 1107 aa34.9■■■■□ 3.18
RAB40B-207ENST00000572603 TSPOAP1O95153 1857 aa34.9■■■■□ 3.18
RAB40B-207ENST00000572603 LRRC9Q6ZRR7 1453 aa34.81■■■■□ 3.16
RAB40B-207ENST00000572603 MTUS2Q5JR59 1369 aa34.8■■■■□ 3.16
RAB40B-207ENST00000572603 CD109Q6YHK3 1445 aa34.78■■■■□ 3.16
RAB40B-207ENST00000572603 MYO5CQ9NQX4 1742 aa34.78■■■■□ 3.16
RAB40B-207ENST00000572603 SUPT6HQ7KZ85 1726 aaKnown RBP34.75■■■■□ 3.15
RAB40B-207ENST00000572603 CDC42BPAQ5VT25 1732 aa34.72■■■■□ 3.15
RAB40B-207ENST00000572603 PREX2Q70Z35 1606 aa34.7■■■■□ 3.15
RAB40B-207ENST00000572603 KANK4Q5T7N3 995 aaPredicted RBP34.7■■■■□ 3.15
RAB40B-207ENST00000572603 CDC42BPBQ9Y5S2 1711 aa34.67■■■■□ 3.14
RAB40B-207ENST00000572603 ARAP3Q8WWN8 1544 aa34.67■■■■□ 3.14
RAB40B-207ENST00000572603 TEX14Q8IWB6 1497 aa34.67■■■■□ 3.14
RAB40B-207ENST00000572603 NCOA2Q15596 1464 aa34.65■■■■□ 3.14
RAB40B-207ENST00000572603 APLP2Q06481 763 aa34.64■■■■□ 3.14
RAB40B-207ENST00000572603 PLCH2O75038 1416 aa34.64■■■■□ 3.14
RAB40B-207ENST00000572603 CFAP74Q9C0B2 1584 aa34.61■■■■□ 3.13
RAB40B-207ENST00000572603 ITSN2Q9NZM3 1697 aa34.6■■■■□ 3.13
RAB40B-207ENST00000572603 GPATCH8Q9UKJ3 1502 aaKnown RBP34.59■■■■□ 3.13
RAB40B-207ENST00000572603 NEO1Q92859 1461 aa34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms