RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 ERCC6L2Q5T890 1561 aa19.86■□□□□ 0.77
TRIM25-205ENST00000572021 PRXQ9BXM0 1461 aa19.85■□□□□ 0.77
TRIM25-205ENST00000572021 EEA1Q15075 1411 aa19.85■□□□□ 0.77
TRIM25-205ENST00000572021 SHROOM2Q13796 1616 aa19.84■□□□□ 0.77
TRIM25-205ENST00000572021 ARAP1Q96P48 1450 aa19.83■□□□□ 0.77
TRIM25-205ENST00000572021 KIAA0586Q9BVV6 1533 aa19.82■□□□□ 0.76
TRIM25-205ENST00000572021 CYB5RLQ6IPT4 315 aa19.82■□□□□ 0.76
TRIM25-205ENST00000572021 JPH4Q96JJ6 628 aa19.82■□□□□ 0.76
TRIM25-205ENST00000572021 PRG4Q92954 1404 aaPredicted RBP19.8■□□□□ 0.76
TRIM25-205ENST00000572021 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
TRIM25-205ENST00000572021 IQGAP2Q13576 1575 aa19.76■□□□□ 0.75
TRIM25-205ENST00000572021 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
TRIM25-205ENST00000572021 KIF21BO75037 1637 aa19.69■□□□□ 0.74
TRIM25-205ENST00000572021 TTBK1Q5TCY1 1321 aaPredicted RBP19.65■□□□□ 0.74
TRIM25-205ENST00000572021 DISP1Q96F81 1524 aa19.63■□□□□ 0.73
TRIM25-205ENST00000572021 UGGT2Q9NYU1 1516 aa19.63■□□□□ 0.73
TRIM25-205ENST00000572021 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
TRIM25-205ENST00000572021 CARMIL2Q6F5E8 1435 aa19.61■□□□□ 0.73
TRIM25-205ENST00000572021 KIAA0556O60303 1618 aa19.58■□□□□ 0.73
TRIM25-205ENST00000572021 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
TRIM25-205ENST00000572021 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
TRIM25-205ENST00000572021 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
TRIM25-205ENST00000572021 PTPRGP23470 1445 aa19.55■□□□□ 0.72
TRIM25-205ENST00000572021 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
TRIM25-205ENST00000572021 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
TRIM25-205ENST00000572021 SAMD9Q5K651 1589 aa19.47■□□□□ 0.71
TRIM25-205ENST00000572021 FHOD3Q2V2M9 1422 aa19.41■□□□□ 0.7
TRIM25-205ENST00000572021 PLB1Q6P1J6 1458 aa19.4■□□□□ 0.7
TRIM25-205ENST00000572021 UACAQ9BZF9 1416 aa19.4■□□□□ 0.7
TRIM25-205ENST00000572021 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
TRIM25-205ENST00000572021 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
TRIM25-205ENST00000572021 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
TRIM25-205ENST00000572021 NPM1P06748 294 aaKnown RBP eCLIP19.37■□□□□ 0.69
TRIM25-205ENST00000572021 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
TRIM25-205ENST00000572021 UHRF1BP1LA0JNW5 1464 aa19.36■□□□□ 0.69
TRIM25-205ENST00000572021 ABCA8O94911 1581 aa19.35■□□□□ 0.69
TRIM25-205ENST00000572021 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
TRIM25-205ENST00000572021 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
TRIM25-205ENST00000572021 ZCCHC11Q5TAX3 1644 aaKnown RBP19.3■□□□□ 0.68
TRIM25-205ENST00000572021 RAPGEF6Q8TEU7 1601 aa19.28■□□□□ 0.68
TRIM25-205ENST00000572021 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
TRIM25-205ENST00000572021 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
TRIM25-205ENST00000572021 CLIP1P30622 1438 aa19.25■□□□□ 0.67
TRIM25-205ENST00000572021 ASXL2Q76L83 1435 aa19.24■□□□□ 0.67
TRIM25-205ENST00000572021 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
TRIM25-205ENST00000572021 NUP153P49790 1475 aaKnown RBP19.22■□□□□ 0.67
TRIM25-205ENST00000572021 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
TRIM25-205ENST00000572021 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
TRIM25-205ENST00000572021 ATP10BO94823 1461 aa19.2■□□□□ 0.66
TRIM25-205ENST00000572021 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
TRIM25-205ENST00000572021 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
TRIM25-205ENST00000572021 ATP1B4Q9UN42 357 aaPredicted RBP19.19■□□□□ 0.66
TRIM25-205ENST00000572021 FMN1Q68DA7 1419 aa19.19■□□□□ 0.66
TRIM25-205ENST00000572021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
TRIM25-205ENST00000572021 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
TRIM25-205ENST00000572021 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
TRIM25-205ENST00000572021 CDK13Q14004 1512 aaKnown RBP19.13■□□□□ 0.65
TRIM25-205ENST00000572021 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
TRIM25-205ENST00000572021 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
TRIM25-205ENST00000572021 EPRSP07814 1512 aaKnown RBP19.12■□□□□ 0.65
TRIM25-205ENST00000572021 HECW1Q76N89 1606 aa19.12■□□□□ 0.65
TRIM25-205ENST00000572021 TSPOAP1O95153 1857 aa19.12■□□□□ 0.65
TRIM25-205ENST00000572021 LRRIQ1Q96JM4 1722 aa19.11■□□□□ 0.65
TRIM25-205ENST00000572021 CASKIN1Q8WXD9 1431 aa19.06■□□□□ 0.64
TRIM25-205ENST00000572021 GLI2P10070 1586 aa19.06■□□□□ 0.64
TRIM25-205ENST00000572021 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
TRIM25-205ENST00000572021 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
TRIM25-205ENST00000572021 PLEKHD1A6NEE1 506 aa19.02■□□□□ 0.64
TRIM25-205ENST00000572021 PPRC1Q5VV67 1664 aaKnown RBP19.02■□□□□ 0.63
TRIM25-205ENST00000572021 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
TRIM25-205ENST00000572021 CCDC18Q5T9S5 1454 aa18.96■□□□□ 0.63
TRIM25-205ENST00000572021 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
TRIM25-205ENST00000572021 ABCA9Q8IUA7 1624 aa18.95■□□□□ 0.62
TRIM25-205ENST00000572021 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
TRIM25-205ENST00000572021 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
TRIM25-205ENST00000572021 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
TRIM25-205ENST00000572021 KIF14Q15058 1648 aa18.93■□□□□ 0.62
TRIM25-205ENST00000572021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRIM25-205ENST00000572021 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
TRIM25-205ENST00000572021 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
TRIM25-205ENST00000572021 TEX14Q8IWB6 1497 aa18.88■□□□□ 0.61
TRIM25-205ENST00000572021 KDM6BO15054 1643 aa18.87■□□□□ 0.61
TRIM25-205ENST00000572021 COL17A1Q9UMD9 1497 aaPredicted RBP18.84■□□□□ 0.61
TRIM25-205ENST00000572021 MTUS2Q5JR59 1369 aa18.83■□□□□ 0.6
TRIM25-205ENST00000572021 TIAM1Q13009 1591 aa18.81■□□□□ 0.6
TRIM25-205ENST00000572021 MYO5CQ9NQX4 1742 aa18.81■□□□□ 0.6
TRIM25-205ENST00000572021 FANCAO15360 1455 aa18.78■□□□□ 0.6
TRIM25-205ENST00000572021 PLCH2O75038 1416 aa18.77■□□□□ 0.6
TRIM25-205ENST00000572021 EHBP1L1Q8N3D4 1523 aa18.77■□□□□ 0.6
TRIM25-205ENST00000572021 NEO1Q92859 1461 aa18.75■□□□□ 0.59
TRIM25-205ENST00000572021 CDC42BPAQ5VT25 1732 aa18.75■□□□□ 0.59
TRIM25-205ENST00000572021 CDC42BPBQ9Y5S2 1711 aa18.75■□□□□ 0.59
TRIM25-205ENST00000572021 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
TRIM25-205ENST00000572021 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
TRIM25-205ENST00000572021 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
TRIM25-205ENST00000572021 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
TRIM25-205ENST00000572021 CFAP74Q9C0B2 1584 aa18.73■□□□□ 0.59
TRIM25-205ENST00000572021 LRRC9Q6ZRR7 1453 aa18.73■□□□□ 0.59
TRIM25-205ENST00000572021 ARAP3Q8WWN8 1544 aa18.72■□□□□ 0.59
TRIM25-205ENST00000572021 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms