RNA–Protein interactions for RNA: ENST00000571759.1

VAC14-212, Transcript of Vac14, PIKFYVE complex component, humanhuman

Gene VAC14, Length 3,609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-212ENST00000571759 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
VAC14-212ENST00000571759 FAM50AQ14320 339 aaKnown RBP16.46■□□□□ 0.23
VAC14-212ENST00000571759 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
VAC14-212ENST00000571759 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
VAC14-212ENST00000571759 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
VAC14-212ENST00000571759 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
VAC14-212ENST00000571759 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
VAC14-212ENST00000571759 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
VAC14-212ENST00000571759 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
VAC14-212ENST00000571759 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
VAC14-212ENST00000571759 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
VAC14-212ENST00000571759 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
VAC14-212ENST00000571759 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
VAC14-212ENST00000571759 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
VAC14-212ENST00000571759 MTUS2Q5JR59 1369 aa16.23■□□□□ 0.19
VAC14-212ENST00000571759 WDR62O43379 1518 aa16.22■□□□□ 0.19
VAC14-212ENST00000571759 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
VAC14-212ENST00000571759 KCNH8Q96L42 1107 aa16.16■□□□□ 0.18
VAC14-212ENST00000571759 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
VAC14-212ENST00000571759 THOC2Q8NI27 1593 aaKnown RBP16.14■□□□□ 0.17
VAC14-212ENST00000571759 PHLDB1Q86UU1 1377 aa16.14■□□□□ 0.17
VAC14-212ENST00000571759 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
VAC14-212ENST00000571759 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
VAC14-212ENST00000571759 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
VAC14-212ENST00000571759 CUL7Q14999 1698 aa16.11■□□□□ 0.17
VAC14-212ENST00000571759 CCNB3Q8WWL7 1395 aa16.1■□□□□ 0.17
VAC14-212ENST00000571759 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
VAC14-212ENST00000571759 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
VAC14-212ENST00000571759 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
VAC14-212ENST00000571759 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
VAC14-212ENST00000571759 PCF11O94913 1555 aaKnown RBP16.07■□□□□ 0.16
VAC14-212ENST00000571759 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
VAC14-212ENST00000571759 ZEB1P37275 1124 aaPredicted RBP16.06■□□□□ 0.16
VAC14-212ENST00000571759 ADAMTS12P58397 1594 aa16.05■□□□□ 0.16
VAC14-212ENST00000571759 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
VAC14-212ENST00000571759 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
VAC14-212ENST00000571759 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
VAC14-212ENST00000571759 PLB1Q6P1J6 1458 aa16.03■□□□□ 0.16
VAC14-212ENST00000571759 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
VAC14-212ENST00000571759 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
VAC14-212ENST00000571759 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
VAC14-212ENST00000571759 KIAA0586Q9BVV6 1533 aa16.01■□□□□ 0.15
VAC14-212ENST00000571759 CASKIN1Q8WXD9 1431 aa16.01■□□□□ 0.15
VAC14-212ENST00000571759 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
VAC14-212ENST00000571759 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
VAC14-212ENST00000571759 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
VAC14-212ENST00000571759 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
VAC14-212ENST00000571759 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
VAC14-212ENST00000571759 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
VAC14-212ENST00000571759 CARMIL2Q6F5E8 1435 aa15.96■□□□□ 0.15
VAC14-212ENST00000571759 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
VAC14-212ENST00000571759 PTPRGP23470 1445 aa15.96■□□□□ 0.15
VAC14-212ENST00000571759 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
VAC14-212ENST00000571759 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
VAC14-212ENST00000571759 FOXD1Q16676 465 aa15.94■□□□□ 0.14
VAC14-212ENST00000571759 DISP1Q96F81 1524 aa15.94■□□□□ 0.14
VAC14-212ENST00000571759 EFCAB5A4FU69 1503 aa15.92■□□□□ 0.14
VAC14-212ENST00000571759 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
VAC14-212ENST00000571759 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
VAC14-212ENST00000571759 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
VAC14-212ENST00000571759 HIRIP3Q9BW71 556 aaPredicted RBP15.9■□□□□ 0.14
VAC14-212ENST00000571759 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
VAC14-212ENST00000571759 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
VAC14-212ENST00000571759 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.13
VAC14-212ENST00000571759 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
VAC14-212ENST00000571759 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
VAC14-212ENST00000571759 RRBP1Q9P2E9 1410 aaKnown RBP15.85■□□□□ 0.13
VAC14-212ENST00000571759 NUP160Q12769 1436 aa15.85■□□□□ 0.13
VAC14-212ENST00000571759 ERCC6L2Q5T890 1561 aa15.84■□□□□ 0.13
VAC14-212ENST00000571759 FGD6Q6ZV73 1430 aa15.84■□□□□ 0.13
VAC14-212ENST00000571759 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.12
VAC14-212ENST00000571759 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
VAC14-212ENST00000571759 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
VAC14-212ENST00000571759 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
VAC14-212ENST00000571759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
VAC14-212ENST00000571759 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
VAC14-212ENST00000571759 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
VAC14-212ENST00000571759 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
VAC14-212ENST00000571759 MYOM3Q5VTT5 1437 aa15.78■□□□□ 0.12
VAC14-212ENST00000571759 CHD1O14646 1710 aa15.78■□□□□ 0.12
VAC14-212ENST00000571759 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
VAC14-212ENST00000571759 ZNF326Q5BKZ1 582 aaKnown RBP15.74■□□□□ 0.11
VAC14-212ENST00000571759 ATP10BO94823 1461 aa15.74■□□□□ 0.11
VAC14-212ENST00000571759 CCDC18Q5T9S5 1454 aa15.74■□□□□ 0.11
VAC14-212ENST00000571759 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
VAC14-212ENST00000571759 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
VAC14-212ENST00000571759 LRRIQ1Q96JM4 1722 aa15.74■□□□□ 0.11
VAC14-212ENST00000571759 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
VAC14-212ENST00000571759 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
VAC14-212ENST00000571759 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
VAC14-212ENST00000571759 CNGB1Q14028 1251 aaPredicted RBP15.71■□□□□ 0.11
VAC14-212ENST00000571759 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
VAC14-212ENST00000571759 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
VAC14-212ENST00000571759 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
VAC14-212ENST00000571759 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
VAC14-212ENST00000571759 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
VAC14-212ENST00000571759 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
VAC14-212ENST00000571759 TROQ12816 1431 aaPredicted RBP15.68■□□□□ 0.1
VAC14-212ENST00000571759 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
VAC14-212ENST00000571759 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms