RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
SIN3A-215ENST00000570124 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
SIN3A-215ENST00000570124 PKD2Q13563 968 aa9.57□□□□□ -0.88
SIN3A-215ENST00000570124 ZBTB47Q9UFB7 747 aaPredicted RBP9.57□□□□□ -0.88
SIN3A-215ENST00000570124 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
SIN3A-215ENST00000570124 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
SIN3A-215ENST00000570124 PLCB2Q00722 1185 aa9.54□□□□□ -0.88
SIN3A-215ENST00000570124 TOP2AP11388 1531 aaKnown RBP9.54□□□□□ -0.88
SIN3A-215ENST00000570124 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
SIN3A-215ENST00000570124 BCANQ96GW7 911 aa9.51□□□□□ -0.89
SIN3A-215ENST00000570124 NCAPD3P42695 1498 aa9.51□□□□□ -0.89
SIN3A-215ENST00000570124 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
SIN3A-215ENST00000570124 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
SIN3A-215ENST00000570124 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
SIN3A-215ENST00000570124 CIZ1Q9ULV3 898 aaPredicted RBP9.47□□□□□ -0.89
SIN3A-215ENST00000570124 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
SIN3A-215ENST00000570124 SUPT5HO00267 1087 aaKnown RBP9.44□□□□□ -0.9
SIN3A-215ENST00000570124 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
SIN3A-215ENST00000570124 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
SIN3A-215ENST00000570124 NUBP1P53384 320 aa9.39□□□□□ -0.91
SIN3A-215ENST00000570124 CCDC88BA6NC98 1476 aa9.39□□□□□ -0.91
SIN3A-215ENST00000570124 RGL2O15211 777 aa9.38□□□□□ -0.91
SIN3A-215ENST00000570124 MNX1P50219 401 aaPredicted RBP9.38□□□□□ -0.91
SIN3A-215ENST00000570124 GSE1Q14687 1217 aa9.37□□□□□ -0.91
SIN3A-215ENST00000570124 TRIM41Q8WV44 630 aa9.36□□□□□ -0.91
SIN3A-215ENST00000570124 DCAF8Q5TAQ9 597 aa9.34□□□□□ -0.91
SIN3A-215ENST00000570124 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
SIN3A-215ENST00000570124 LAMC3Q9Y6N6 1575 aa9.33□□□□□ -0.92
SIN3A-215ENST00000570124 VSIG10Q8N0Z9 540 aa9.33□□□□□ -0.92
SIN3A-215ENST00000570124 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
SIN3A-215ENST00000570124 NESP48681 1621 aa9.33□□□□□ -0.92
SIN3A-215ENST00000570124 NPM1P06748 294 aaKnown RBP eCLIP9.32□□□□□ -0.92
SIN3A-215ENST00000570124 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
SIN3A-215ENST00000570124 RASEFQ8IZ41 740 aa9.3□□□□□ -0.92
SIN3A-215ENST00000570124 PRKCSHP14314 528 aaPredicted RBP9.27□□□□□ -0.93
SIN3A-215ENST00000570124 PRKAR2AP13861 404 aaKnown RBP9.25□□□□□ -0.93
SIN3A-215ENST00000570124 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
SIN3A-215ENST00000570124 CFTRP13569 1480 aa9.24□□□□□ -0.93
SIN3A-215ENST00000570124 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-215ENST00000570124 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-215ENST00000570124 FARP1Q9Y4F1 1045 aaPredicted RBP9.24□□□□□ -0.93
SIN3A-215ENST00000570124 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
SIN3A-215ENST00000570124 FXR2P51116 673 aaKnown RBP eCLIP9.23□□□□□ -0.937e-6■■■■□ 23.7
SIN3A-215ENST00000570124 CHRDL2Q6WN34 429 aa9.23□□□□□ -0.93
SIN3A-215ENST00000570124 THOC2Q8NI27 1593 aaKnown RBP9.23□□□□□ -0.93
SIN3A-215ENST00000570124 ABCC8Q09428 1581 aa9.2□□□□□ -0.94
SIN3A-215ENST00000570124 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
SIN3A-215ENST00000570124 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
SIN3A-215ENST00000570124 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
SIN3A-215ENST00000570124 PYGBP11216 843 aa9.19□□□□□ -0.94
SIN3A-215ENST00000570124 TSPYL2Q9H2G4 693 aaPredicted RBP9.19□□□□□ -0.94
SIN3A-215ENST00000570124 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
SIN3A-215ENST00000570124 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
SIN3A-215ENST00000570124 PAXIP1Q6ZW49 1069 aaPredicted RBP9.17□□□□□ -0.94
SIN3A-215ENST00000570124 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
SIN3A-215ENST00000570124 PIP4P2Q8N4L2 257 aa9.17□□□□□ -0.94
SIN3A-215ENST00000570124 FANCD2Q9BXW9 1451 aa9.16□□□□□ -0.94
SIN3A-215ENST00000570124 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
SIN3A-215ENST00000570124 WDR97A6NE52 1622 aa9.16□□□□□ -0.94
SIN3A-215ENST00000570124 SYNJ1O43426 1573 aa9.16□□□□□ -0.94
SIN3A-215ENST00000570124 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
SIN3A-215ENST00000570124 CEP164Q9UPV0 1460 aa9.14□□□□□ -0.95
SIN3A-215ENST00000570124 TOP2BQ02880 1626 aa9.13□□□□□ -0.95
SIN3A-215ENST00000570124 CUX1P39880 1505 aa9.12□□□□□ -0.95
SIN3A-215ENST00000570124 DNMBPQ6XZF7 1577 aa9.12□□□□□ -0.95
SIN3A-215ENST00000570124 URB2Q14146 1524 aaKnown RBP9.11□□□□□ -0.95
SIN3A-215ENST00000570124 ERCC6Q03468 1493 aa9.11□□□□□ -0.95
SIN3A-215ENST00000570124 SPRYD3Q8NCJ5 442 aa9.11□□□□□ -0.95
SIN3A-215ENST00000570124 PDS5BQ9NTI5 1447 aa9.11□□□□□ -0.95
SIN3A-215ENST00000570124 WDR62O43379 1518 aa9.1□□□□□ -0.95
SIN3A-215ENST00000570124 STK25O00506 426 aa9.1□□□□□ -0.95
SIN3A-215ENST00000570124 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
SIN3A-215ENST00000570124 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
SIN3A-215ENST00000570124 PBRM1Q86U86 1689 aa9.08□□□□□ -0.96
SIN3A-215ENST00000570124 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.08□□□□□ -0.96
SIN3A-215ENST00000570124 ZFP91Q96JP5 570 aaPredicted RBP9.08□□□□□ -0.96
SIN3A-215ENST00000570124 CCDC61Q9Y6R9 512 aa9.08□□□□□ -0.96
SIN3A-215ENST00000570124 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
SIN3A-215ENST00000570124 TARBP1Q13395 1621 aaKnown RBP9.07□□□□□ -0.96
SIN3A-215ENST00000570124 ERICH6Q7L0X2 663 aa9.07□□□□□ -0.96
SIN3A-215ENST00000570124 ZNF467Q7Z7K2 595 aaPredicted RBP9.06□□□□□ -0.96
SIN3A-215ENST00000570124 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
SIN3A-215ENST00000570124 DNAJC5Q9H3Z4 198 aa9.06□□□□□ -0.96
SIN3A-215ENST00000570124 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
SIN3A-215ENST00000570124 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
SIN3A-215ENST00000570124 NKX1-1Q15270 411 aaPredicted RBP9.03□□□□□ -0.96
SIN3A-215ENST00000570124 PCDHB8Q9UN66 801 aa9.03□□□□□ -0.96
SIN3A-215ENST00000570124 PCDHB13Q9Y5F0 798 aa9.03□□□□□ -0.96
SIN3A-215ENST00000570124 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
SIN3A-215ENST00000570124 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
SIN3A-215ENST00000570124 FGD5Q6ZNL6 1462 aa9.02□□□□□ -0.97
SIN3A-215ENST00000570124 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
SIN3A-215ENST00000570124 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
SIN3A-215ENST00000570124 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
SIN3A-215ENST00000570124 ZRANB1Q9UGI0 708 aa9□□□□□ -0.97
SIN3A-215ENST00000570124 CUX2O14529 1486 aa9□□□□□ -0.97
SIN3A-215ENST00000570124 POLA1P09884 1462 aaPredicted RBP9□□□□□ -0.97
SIN3A-215ENST00000570124 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
SIN3A-215ENST00000570124 ABCA5Q8WWZ7 1642 aa8.99□□□□□ -0.97
SIN3A-215ENST00000570124 ZNF579Q8NAF0 562 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms