RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 AEBP2Q6ZN18 517 aaPredicted RBP17.31■□□□□ 0.36
SIN3A-215ENST00000570124 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
SIN3A-215ENST00000570124 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
SIN3A-215ENST00000570124 SENP3Q9H4L4 574 aaPredicted RBP14.65□□□□□ -0.06
SIN3A-215ENST00000570124 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
SIN3A-215ENST00000570124 FOXD1Q16676 465 aa13.55□□□□□ -0.24
SIN3A-215ENST00000570124 ADRA2BP18089 450 aa13.27□□□□□ -0.29
SIN3A-215ENST00000570124 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
SIN3A-215ENST00000570124 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
SIN3A-215ENST00000570124 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
SIN3A-215ENST00000570124 KCNA4P22459 653 aa12.47□□□□□ -0.41
SIN3A-215ENST00000570124 PPP4R3CPQ6ZMV5 832 aa12.44□□□□□ -0.42
SIN3A-215ENST00000570124 MSH5O43196 834 aa12.39□□□□□ -0.43
SIN3A-215ENST00000570124 NCBP3Q53F19 620 aaKnown RBP12.19□□□□□ -0.46
SIN3A-215ENST00000570124 SCAF1Q9H7N4 1312 aaKnown RBP12.13□□□□□ -0.47
SIN3A-215ENST00000570124 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
SIN3A-215ENST00000570124 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
SIN3A-215ENST00000570124 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
SIN3A-215ENST00000570124 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
SIN3A-215ENST00000570124 SLC4A1APQ9BWU0 796 aaKnown RBP11.94□□□□□ -0.5
SIN3A-215ENST00000570124 DMRT2Q9Y5R5 561 aa11.73□□□□□ -0.53
SIN3A-215ENST00000570124 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
SIN3A-215ENST00000570124 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
SIN3A-215ENST00000570124 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
SIN3A-215ENST00000570124 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
SIN3A-215ENST00000570124 ZBTB22O15209 634 aa11.48□□□□□ -0.57
SIN3A-215ENST00000570124 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
SIN3A-215ENST00000570124 SLC4A2P04920 1241 aa11.27□□□□□ -0.61
SIN3A-215ENST00000570124 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
SIN3A-215ENST00000570124 CCDC180Q9P1Z9 1646 aa11.25□□□□□ -0.61
SIN3A-215ENST00000570124 MYCNP04198 464 aaPredicted RBP11.1□□□□□ -0.63
SIN3A-215ENST00000570124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.642e-10■□□□□ 10.5
SIN3A-215ENST00000570124 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
SIN3A-215ENST00000570124 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
SIN3A-215ENST00000570124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
SIN3A-215ENST00000570124 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
SIN3A-215ENST00000570124 SAMD1Q6SPF0 538 aaPredicted RBP10.85□□□□□ -0.67
SIN3A-215ENST00000570124 POTEDQ86YR6 584 aa10.8□□□□□ -0.68
SIN3A-215ENST00000570124 ATF5Q9Y2D1 282 aaPredicted RBP10.78□□□□□ -0.68
SIN3A-215ENST00000570124 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
SIN3A-215ENST00000570124 APLP2Q06481 763 aa10.69□□□□□ -0.7
SIN3A-215ENST00000570124 ABCC9O60706 1549 aa10.66□□□□□ -0.7
SIN3A-215ENST00000570124 RNF39Q9H2S5 420 aa10.64□□□□□ -0.71
SIN3A-215ENST00000570124 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
SIN3A-215ENST00000570124 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
SIN3A-215ENST00000570124 FKBP8Q14318 412 aa10.53□□□□□ -0.72
SIN3A-215ENST00000570124 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
SIN3A-215ENST00000570124 ZCCHC6Q5VYS8 1495 aaKnown RBP10.52□□□□□ -0.73
SIN3A-215ENST00000570124 TRHP20396 242 aaPredicted RBP10.51□□□□□ -0.73
SIN3A-215ENST00000570124 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
SIN3A-215ENST00000570124 CAPN15O75808 1086 aa10.49□□□□□ -0.73
SIN3A-215ENST00000570124 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
SIN3A-215ENST00000570124 DCAF1Q9Y4B6 1507 aa10.39□□□□□ -0.75
SIN3A-215ENST00000570124 NACADO15069 1562 aa10.39□□□□□ -0.75
SIN3A-215ENST00000570124 POLA2Q14181 598 aa10.38□□□□□ -0.75
SIN3A-215ENST00000570124 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
SIN3A-215ENST00000570124 ABCB7O75027 752 aa10.33□□□□□ -0.76
SIN3A-215ENST00000570124 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
SIN3A-215ENST00000570124 FBLN2P98095 1184 aa10.32□□□□□ -0.76
SIN3A-215ENST00000570124 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
SIN3A-215ENST00000570124 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
SIN3A-215ENST00000570124 DCAF8L2P0C7V8 631 aa10.27□□□□□ -0.77
SIN3A-215ENST00000570124 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
SIN3A-215ENST00000570124 SCRIBQ14160 1630 aa10.23□□□□□ -0.77
SIN3A-215ENST00000570124 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
SIN3A-215ENST00000570124 DSG3P32926 999 aa10.22□□□□□ -0.77
SIN3A-215ENST00000570124 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
SIN3A-215ENST00000570124 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
SIN3A-215ENST00000570124 PROM2Q8N271 834 aa10.07□□□□□ -0.8
SIN3A-215ENST00000570124 FBXO3Q9UK99 471 aa10.05□□□□□ -0.8
SIN3A-215ENST00000570124 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
SIN3A-215ENST00000570124 SHROOM4Q9ULL8 1493 aa10.01□□□□□ -0.81
SIN3A-215ENST00000570124 ZNF692Q9BU19 519 aaPredicted RBP9.99□□□□□ -0.81
SIN3A-215ENST00000570124 SPDYE2BA6NHP3 402 aa9.98□□□□□ -0.81
SIN3A-215ENST00000570124 SPDYE6P0CI01 402 aa9.98□□□□□ -0.81
SIN3A-215ENST00000570124 SPDYE2Q495Y8 402 aa9.98□□□□□ -0.81
SIN3A-215ENST00000570124 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
SIN3A-215ENST00000570124 SSUH2Q9Y2M2 353 aa9.93□□□□□ -0.82
SIN3A-215ENST00000570124 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.82
SIN3A-215ENST00000570124 SMARCA4P51532 1647 aa9.81□□□□□ -0.84
SIN3A-215ENST00000570124 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
SIN3A-215ENST00000570124 IFNLR1Q8IU57 520 aaPredicted RBP9.79□□□□□ -0.84
SIN3A-215ENST00000570124 CECR2Q9BXF3 1484 aa9.79□□□□□ -0.84
SIN3A-215ENST00000570124 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
SIN3A-215ENST00000570124 WIZO95785 1651 aa9.76□□□□□ -0.85
SIN3A-215ENST00000570124 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
SIN3A-215ENST00000570124 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
SIN3A-215ENST00000570124 BAZ1AQ9NRL2 1556 aaPredicted RBP9.73□□□□□ -0.85
SIN3A-215ENST00000570124 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
SIN3A-215ENST00000570124 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
SIN3A-215ENST00000570124 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.86
SIN3A-215ENST00000570124 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SIN3A-215ENST00000570124 AKT1S1Q96B36 256 aa9.68□□□□□ -0.86
SIN3A-215ENST00000570124 PEG3Q9GZU2 1588 aa9.67□□□□□ -0.86
SIN3A-215ENST00000570124 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
SIN3A-215ENST00000570124 PLEKHG5O94827 1062 aa9.62□□□□□ -0.87
SIN3A-215ENST00000570124 SPDYE1Q8NFV5 336 aaPredicted RBP9.62□□□□□ -0.87
SIN3A-215ENST00000570124 SMARCA2P51531 1590 aa9.6□□□□□ -0.87
SIN3A-215ENST00000570124 RSF1Q96T23 1441 aaPredicted RBP9.59□□□□□ -0.87
SIN3A-215ENST00000570124 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms