RNA–Protein interactions for RNA: ENST00000569862.5

CENPT-233, Transcript of centromere protein T, human

TSL 2

Gene CENPT, Length 2,957 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CENPT-233	ENST00000569862	CCER2	I3L3R5	266 aa		18.85	■□□□□ 0.61
CENPT-233	ENST00000569862	ERICH3	Q5RHP9	1530 aa		18.83	■□□□□ 0.6
CENPT-233	ENST00000569862	PRX	Q9BXM0	1461 aa		18.8	■□□□□ 0.6
CENPT-233	ENST00000569862	PRKCSH	P14314	528 aa	Predicted RBP	18.78	■□□□□ 0.6
CENPT-233	ENST00000569862	SIN3A	Q96ST3	1273 aa		18.78	■□□□□ 0.6
CENPT-233	ENST00000569862	NES	P48681	1621 aa		18.76	■□□□□ 0.59
CENPT-233	ENST00000569862	TOP2B	Q02880	1626 aa		18.76	■□□□□ 0.59
CENPT-233	ENST00000569862	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.76	■□□□□ 0.59
CENPT-233	ENST00000569862	ANP32C	O43423	234 aa		18.76	■□□□□ 0.59
CENPT-233	ENST00000569862	ERICH6	Q7L0X2	663 aa		18.76	■□□□□ 0.59
CENPT-233	ENST00000569862	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.74	■□□□□ 0.59
CENPT-233	ENST00000569862	SETD5	Q9C0A6	1442 aa		18.72	■□□□□ 0.59
CENPT-233	ENST00000569862	IRX6	P78412	446 aa	Predicted RBP	18.7	■□□□□ 0.58
CENPT-233	ENST00000569862	CFTR	P13569	1480 aa		18.69	■□□□□ 0.58
CENPT-233	ENST00000569862	DEK	P35659	375 aa	Known RBP	18.68	■□□□□ 0.58
CENPT-233	ENST00000569862	CADPS	Q9ULU8	1353 aa		18.68	■□□□□ 0.58
CENPT-233	ENST00000569862	ARHGAP35	Q9NRY4	1499 aa		18.67	■□□□□ 0.58
CENPT-233	ENST00000569862	BIVM-ERCC5	R4GMW8	1640 aa		18.67	■□□□□ 0.58
CENPT-233	ENST00000569862	MYT1L	Q9UL68	1186 aa		18.67	■□□□□ 0.58
CENPT-233	ENST00000569862	TIMELESS	Q9UNS1	1208 aa		18.64	■□□□□ 0.57
CENPT-233	ENST00000569862	CUX1	P39880	1505 aa		18.61	■□□□□ 0.57
CENPT-233	ENST00000569862	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.6	■□□□□ 0.57
CENPT-233	ENST00000569862	TIAM1	Q13009	1591 aa		18.59	■□□□□ 0.57
CENPT-233	ENST00000569862	PHLDB1	Q86UU1	1377 aa		18.56	■□□□□ 0.56
CENPT-233	ENST00000569862	PPP4R2	Q9NY27	417 aa		18.54	■□□□□ 0.56
CENPT-233	ENST00000569862	MAP3K1	Q13233	1512 aa		18.54	■□□□□ 0.56
CENPT-233	ENST00000569862	ERICH6B	Q5W0A0	696 aa		18.54	■□□□□ 0.56
CENPT-233	ENST00000569862	LRRC9	Q6ZRR7	1453 aa		18.52	■□□□□ 0.56
CENPT-233	ENST00000569862	FANCD2	Q9BXW9	1451 aa		18.52	■□□□□ 0.56
CENPT-233	ENST00000569862	FAM50A	Q14320	339 aa	Known RBP	18.51	■□□□□ 0.55
CENPT-233	ENST00000569862	KIF27	Q86VH2	1401 aa		18.49	■□□□□ 0.55
CENPT-233	ENST00000569862	NOP58	Q9Y2X3	529 aa	Known RBP	18.48	■□□□□ 0.55
CENPT-233	ENST00000569862	PAK3	O75914	559 aa	Predicted RBP	18.47	■□□□□ 0.55
CENPT-233	ENST00000569862	NBR1	Q14596	966 aa		18.46	■□□□□ 0.55
CENPT-233	ENST00000569862	B4GALNT3	Q6L9W6	998 aa		18.45	■□□□□ 0.54
CENPT-233	ENST00000569862	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.45	■□□□□ 0.54
CENPT-233	ENST00000569862	TONSL	Q96HA7	1378 aa		18.44	■□□□□ 0.54
CENPT-233	ENST00000569862	RAD54L2	Q9Y4B4	1467 aa		18.42	■□□□□ 0.54
CENPT-233	ENST00000569862	FGD5	Q6ZNL6	1462 aa		18.41	■□□□□ 0.54
CENPT-233	ENST00000569862	CCDC184	Q52MB2	194 aa		18.39	■□□□□ 0.53
CENPT-233	ENST00000569862	CFAP43	Q8NDM7	1665 aa		18.39	■□□□□ 0.53
CENPT-233	ENST00000569862	FHAD1	B1AJZ9	1412 aa		18.38	■□□□□ 0.53
CENPT-233	ENST00000569862	KDM5B	Q9UGL1	1544 aa		18.38	■□□□□ 0.53
CENPT-233	ENST00000569862	PRDM2	Q13029	1718 aa		18.36	■□□□□ 0.53
CENPT-233	ENST00000569862	WASHC2A	Q641Q2	1341 aa		18.36	■□□□□ 0.53
CENPT-233	ENST00000569862	PCF11	O94913	1555 aa	Known RBP	18.32	■□□□□ 0.52
CENPT-233	ENST00000569862	SALL2	Q9Y467	1007 aa	Predicted RBP	18.32	■□□□□ 0.52
CENPT-233	ENST00000569862	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
CENPT-233	ENST00000569862	CCDC18	Q5T9S5	1454 aa		18.31	■□□□□ 0.52
CENPT-233	ENST00000569862	URB2	Q14146	1524 aa	Known RBP	18.31	■□□□□ 0.52
CENPT-233	ENST00000569862	TOPBP1	Q92547	1522 aa		18.3	■□□□□ 0.52
CENPT-233	ENST00000569862	KIF21A	Q7Z4S6	1674 aa		18.3	■□□□□ 0.52
CENPT-233	ENST00000569862	NCOA2	Q15596	1464 aa		18.29	■□□□□ 0.52
CENPT-233	ENST00000569862	ZBED9	Q6R2W3	1325 aa		18.29	■□□□□ 0.52
CENPT-233	ENST00000569862	UACA	Q9BZF9	1416 aa		18.29	■□□□□ 0.52
CENPT-233	ENST00000569862	HSPA5	P11021	654 aa	Known RBP	18.28	■□□□□ 0.52
CENPT-233	ENST00000569862	IGF1R	P08069	1367 aa		18.28	■□□□□ 0.52
CENPT-233	ENST00000569862	TDRD9	Q8NDG6	1382 aa	Known RBP	18.28	■□□□□ 0.52
CENPT-233	ENST00000569862	IPO9	Q96P70	1041 aa	Known RBP	18.27	■□□□□ 0.52
CENPT-233	ENST00000569862	LAMC3	Q9Y6N6	1575 aa		18.27	■□□□□ 0.52
CENPT-233	ENST00000569862	POLA1	P09884	1462 aa	Predicted RBP	18.27	■□□□□ 0.52
CENPT-233	ENST00000569862	FAM9B	Q8IZU0	186 aa		18.27	■□□□□ 0.51
CENPT-233	ENST00000569862	CNTLN	Q9NXG0	1405 aa		18.26	■□□□□ 0.51
CENPT-233	ENST00000569862	PDS5B	Q9NTI5	1447 aa		18.26	■□□□□ 0.51
CENPT-233	ENST00000569862	IL27	Q8NEV9	243 aa		18.24	■□□□□ 0.51
CENPT-233	ENST00000569862	PTPN23	Q9H3S7	1636 aa		18.24	■□□□□ 0.51
CENPT-233	ENST00000569862	PTPRK	Q15262	1439 aa		18.24	■□□□□ 0.51
CENPT-233	ENST00000569862	HFM1	A2PYH4	1435 aa		18.23	■□□□□ 0.51
CENPT-233	ENST00000569862	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.23	■□□□□ 0.51
CENPT-233	ENST00000569862	AQR	O60306	1485 aa	Known RBP eCLIP	18.23	■□□□□ 0.51	3e-8	■■■■□ 23.8
CENPT-233	ENST00000569862	RTL5	Q5HYW3	569 aa	Predicted RBP	18.22	■□□□□ 0.51
CENPT-233	ENST00000569862	ANP32A	P39687	249 aa	Known RBP	18.22	■□□□□ 0.51
CENPT-233	ENST00000569862	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.21	■□□□□ 0.51
CENPT-233	ENST00000569862	DNMBP	Q6XZF7	1577 aa		18.21	■□□□□ 0.51
CENPT-233	ENST00000569862	FGD6	Q6ZV73	1430 aa		18.21	■□□□□ 0.51
CENPT-233	ENST00000569862	P3H3	Q8IVL6	736 aa		18.21	■□□□□ 0.5
CENPT-233	ENST00000569862	MRS2	Q9HD23	443 aa		18.21	■□□□□ 0.5
CENPT-233	ENST00000569862	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.19	■□□□□ 0.5
CENPT-233	ENST00000569862	CARMIL1	Q5VZK9	1371 aa		18.19	■□□□□ 0.5
CENPT-233	ENST00000569862	AKNA	Q7Z591	1439 aa		18.19	■□□□□ 0.5
CENPT-233	ENST00000569862	C11orf95	C9JLR9	678 aa	Predicted RBP	18.18	■□□□□ 0.5
CENPT-233	ENST00000569862	NAIP	Q13075	1403 aa		18.17	■□□□□ 0.5
CENPT-233	ENST00000569862	FYCO1	Q9BQS8	1478 aa		18.17	■□□□□ 0.5
CENPT-233	ENST00000569862	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
CENPT-233	ENST00000569862	CCDC136	Q96JN2	1154 aa		18.16	■□□□□ 0.5
CENPT-233	ENST00000569862	ERCC6	Q03468	1493 aa		18.15	■□□□□ 0.5
CENPT-233	ENST00000569862	SMG6	Q86US8	1419 aa	Known RBP	18.15	■□□□□ 0.5
CENPT-233	ENST00000569862	RTN4	Q9NQC3	1192 aa	Known RBP	18.15	■□□□□ 0.5
CENPT-233	ENST00000569862	FHOD3	Q2V2M9	1422 aa		18.15	■□□□□ 0.5
CENPT-233	ENST00000569862	NCOA1	Q15788	1441 aa		18.14	■□□□□ 0.49
CENPT-233	ENST00000569862	CCDC7	Q96M83	1385 aa		18.14	■□□□□ 0.49
CENPT-233	ENST00000569862	RNF123	Q5XPI4	1314 aa		18.13	■□□□□ 0.49
CENPT-233	ENST00000569862	CASKIN1	Q8WXD9	1431 aa		18.13	■□□□□ 0.49
CENPT-233	ENST00000569862	DENND4B	O75064	1496 aa	Predicted RBP	18.11	■□□□□ 0.49
CENPT-233	ENST00000569862	FMN1	Q68DA7	1419 aa		18.08	■□□□□ 0.48
CENPT-233	ENST00000569862	NUDC	Q9Y266	331 aa		18.07	■□□□□ 0.48
CENPT-233	ENST00000569862	ABCA10	Q8WWZ4	1543 aa		18.06	■□□□□ 0.48
CENPT-233	ENST00000569862	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.05	■□□□□ 0.48
CENPT-233	ENST00000569862	HECW1	Q76N89	1606 aa		18.02	■□□□□ 0.48
CENPT-233	ENST00000569862	EFCAB5	A4FU69	1503 aa		18.02	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms