RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 NUP160Q12769 1436 aa20.31■□□□□ 0.84
EDC3-217ENST00000569606 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
EDC3-217ENST00000569606 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
EDC3-217ENST00000569606 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
EDC3-217ENST00000569606 CLASP1Q7Z460 1538 aa20.21■□□□□ 0.83
EDC3-217ENST00000569606 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
EDC3-217ENST00000569606 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
EDC3-217ENST00000569606 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
EDC3-217ENST00000569606 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
EDC3-217ENST00000569606 CLIP1P30622 1438 aa20.1■□□□□ 0.81
EDC3-217ENST00000569606 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
EDC3-217ENST00000569606 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
EDC3-217ENST00000569606 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
EDC3-217ENST00000569606 EFCAB5A4FU69 1503 aa20.08■□□□□ 0.81
EDC3-217ENST00000569606 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
EDC3-217ENST00000569606 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
EDC3-217ENST00000569606 DISP1Q96F81 1524 aa20.05■□□□□ 0.8
EDC3-217ENST00000569606 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
EDC3-217ENST00000569606 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.79
EDC3-217ENST00000569606 ARAP1Q96P48 1450 aa20■□□□□ 0.79
EDC3-217ENST00000569606 CARMIL2Q6F5E8 1435 aa20■□□□□ 0.79
EDC3-217ENST00000569606 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
EDC3-217ENST00000569606 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
EDC3-217ENST00000569606 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
EDC3-217ENST00000569606 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
EDC3-217ENST00000569606 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
EDC3-217ENST00000569606 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
EDC3-217ENST00000569606 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
EDC3-217ENST00000569606 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
EDC3-217ENST00000569606 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
EDC3-217ENST00000569606 PTPRGP23470 1445 aa19.83■□□□□ 0.76
EDC3-217ENST00000569606 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
EDC3-217ENST00000569606 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
EDC3-217ENST00000569606 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
EDC3-217ENST00000569606 ABCA8O94911 1581 aa19.78■□□□□ 0.76
EDC3-217ENST00000569606 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
EDC3-217ENST00000569606 PLB1Q6P1J6 1458 aa19.77■□□□□ 0.76
EDC3-217ENST00000569606 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
EDC3-217ENST00000569606 HECW1Q76N89 1606 aa19.75■□□□□ 0.75
EDC3-217ENST00000569606 LRRIQ1Q96JM4 1722 aa19.73■□□□□ 0.75
EDC3-217ENST00000569606 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
EDC3-217ENST00000569606 NUP153P49790 1475 aaKnown RBP19.71■□□□□ 0.75
EDC3-217ENST00000569606 ABCC2Q92887 1545 aa19.71■□□□□ 0.75
EDC3-217ENST00000569606 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
EDC3-217ENST00000569606 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
EDC3-217ENST00000569606 ADCY10Q96PN6 1610 aa19.68■□□□□ 0.74
EDC3-217ENST00000569606 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
EDC3-217ENST00000569606 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
EDC3-217ENST00000569606 CCDC18Q5T9S5 1454 aa19.64■□□□□ 0.73
EDC3-217ENST00000569606 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
EDC3-217ENST00000569606 TIAM1Q13009 1591 aa19.64■□□□□ 0.73
EDC3-217ENST00000569606 CDK13Q14004 1512 aaKnown RBP19.63■□□□□ 0.73
EDC3-217ENST00000569606 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
EDC3-217ENST00000569606 ATP10BO94823 1461 aa19.6■□□□□ 0.73
EDC3-217ENST00000569606 ZCCHC11Q5TAX3 1644 aaKnown RBP19.6■□□□□ 0.73
EDC3-217ENST00000569606 KDM5BQ9UGL1 1544 aa19.6■□□□□ 0.73
EDC3-217ENST00000569606 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
EDC3-217ENST00000569606 APLP2Q06481 763 aa19.59■□□□□ 0.73
EDC3-217ENST00000569606 MAGI3Q5TCQ9 1506 aa19.53■□□□□ 0.72
EDC3-217ENST00000569606 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
EDC3-217ENST00000569606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
EDC3-217ENST00000569606 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
EDC3-217ENST00000569606 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
EDC3-217ENST00000569606 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
EDC3-217ENST00000569606 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
EDC3-217ENST00000569606 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
EDC3-217ENST00000569606 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
EDC3-217ENST00000569606 TROQ12816 1431 aaPredicted RBP19.46■□□□□ 0.71
EDC3-217ENST00000569606 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
EDC3-217ENST00000569606 PLEKHD1A6NEE1 506 aa19.45■□□□□ 0.7
EDC3-217ENST00000569606 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
EDC3-217ENST00000569606 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
EDC3-217ENST00000569606 MAPKBP1O60336 1514 aa19.42■□□□□ 0.7
EDC3-217ENST00000569606 WDR7Q9Y4E6 1490 aa19.41■□□□□ 0.7
EDC3-217ENST00000569606 KIF14Q15058 1648 aa19.41■□□□□ 0.7
EDC3-217ENST00000569606 NCOA2Q15596 1464 aa19.37■□□□□ 0.69
EDC3-217ENST00000569606 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
EDC3-217ENST00000569606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.68
EDC3-217ENST00000569606 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
EDC3-217ENST00000569606 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
EDC3-217ENST00000569606 PHLDB1Q86UU1 1377 aa19.31■□□□□ 0.68
EDC3-217ENST00000569606 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
EDC3-217ENST00000569606 CDC42BPAQ5VT25 1732 aa19.29■□□□□ 0.68
EDC3-217ENST00000569606 DIP2BQ9P265 1576 aa19.27■□□□□ 0.68
EDC3-217ENST00000569606 ITSN2Q9NZM3 1697 aa19.27■□□□□ 0.68
EDC3-217ENST00000569606 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
EDC3-217ENST00000569606 MYO5CQ9NQX4 1742 aa19.26■□□□□ 0.67
EDC3-217ENST00000569606 CCNB3Q8WWL7 1395 aa19.26■□□□□ 0.67
EDC3-217ENST00000569606 GLI2P10070 1586 aa19.26■□□□□ 0.67
EDC3-217ENST00000569606 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
EDC3-217ENST00000569606 PREX2Q70Z35 1606 aa19.25■□□□□ 0.67
EDC3-217ENST00000569606 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
EDC3-217ENST00000569606 KIF13AQ9H1H9 1805 aa19.23■□□□□ 0.67
EDC3-217ENST00000569606 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
EDC3-217ENST00000569606 FGD6Q6ZV73 1430 aa19.21■□□□□ 0.67
EDC3-217ENST00000569606 RRBP1Q9P2E9 1410 aaKnown RBP19.21■□□□□ 0.67
EDC3-217ENST00000569606 MIA2Q96PC5 1412 aa19.2■□□□□ 0.66
EDC3-217ENST00000569606 PLCH2O75038 1416 aa19.19■□□□□ 0.66
EDC3-217ENST00000569606 ARAP3Q8WWN8 1544 aa19.19■□□□□ 0.66
EDC3-217ENST00000569606 PTPN23Q9H3S7 1636 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms