RNA–Protein interactions for RNA: ENST00000568632.5

CDH16-207, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-207ENST00000568632 CLIP1P30622 1438 aa24.18■■□□□ 1.46
CDH16-207ENST00000568632 MAGI1Q96QZ7 1491 aaPredicted RBP24.09■■□□□ 1.45
CDH16-207ENST00000568632 FBLN2P98095 1184 aa24.07■■□□□ 1.44
CDH16-207ENST00000568632 CTTNBP2Q8WZ74 1663 aa24.06■■□□□ 1.44
CDH16-207ENST00000568632 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
CDH16-207ENST00000568632 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
CDH16-207ENST00000568632 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
CDH16-207ENST00000568632 ZEB1P37275 1124 aaPredicted RBP24.02■■□□□ 1.44
CDH16-207ENST00000568632 ARHGAP35Q9NRY4 1499 aa24■■□□□ 1.43
CDH16-207ENST00000568632 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
CDH16-207ENST00000568632 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
CDH16-207ENST00000568632 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
CDH16-207ENST00000568632 CEP170Q5SW79 1584 aa23.9■■□□□ 1.42
CDH16-207ENST00000568632 IQGAP2Q13576 1575 aa23.89■■□□□ 1.42
CDH16-207ENST00000568632 SCAF1Q9H7N4 1312 aaKnown RBP23.88■■□□□ 1.41
CDH16-207ENST00000568632 CHD1O14646 1710 aa23.85■■□□□ 1.41
CDH16-207ENST00000568632 KIAA0586Q9BVV6 1533 aa23.85■■□□□ 1.41
CDH16-207ENST00000568632 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
CDH16-207ENST00000568632 NUP160Q12769 1436 aa23.83■■□□□ 1.41
CDH16-207ENST00000568632 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
CDH16-207ENST00000568632 SAMD9Q5K651 1589 aa23.8■■□□□ 1.4
CDH16-207ENST00000568632 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
CDH16-207ENST00000568632 UGGT2Q9NYU1 1516 aa23.74■■□□□ 1.39
CDH16-207ENST00000568632 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
CDH16-207ENST00000568632 APLP2Q06481 763 aa23.69■■□□□ 1.38
CDH16-207ENST00000568632 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
CDH16-207ENST00000568632 ATP1B4Q9UN42 357 aaPredicted RBP23.67■■□□□ 1.38
CDH16-207ENST00000568632 PCF11O94913 1555 aaKnown RBP23.67■■□□□ 1.38
CDH16-207ENST00000568632 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
CDH16-207ENST00000568632 FMN1Q68DA7 1419 aa23.64■■□□□ 1.38
CDH16-207ENST00000568632 CASKIN1Q8WXD9 1431 aa23.58■■□□□ 1.37
CDH16-207ENST00000568632 KANK4Q5T7N3 995 aaPredicted RBP23.58■■□□□ 1.36
CDH16-207ENST00000568632 FYCO1Q9BQS8 1478 aa23.57■■□□□ 1.36
CDH16-207ENST00000568632 PRG4Q92954 1404 aaPredicted RBP23.56■■□□□ 1.36
CDH16-207ENST00000568632 CARMIL2Q6F5E8 1435 aa23.56■■□□□ 1.36
CDH16-207ENST00000568632 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
CDH16-207ENST00000568632 TIAM1Q13009 1591 aa23.51■■□□□ 1.35
CDH16-207ENST00000568632 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
CDH16-207ENST00000568632 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
CDH16-207ENST00000568632 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
CDH16-207ENST00000568632 LRRIQ1Q96JM4 1722 aa23.48■■□□□ 1.35
CDH16-207ENST00000568632 CFAP43Q8NDM7 1665 aa23.45■■□□□ 1.34
CDH16-207ENST00000568632 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
CDH16-207ENST00000568632 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
CDH16-207ENST00000568632 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
CDH16-207ENST00000568632 HECW1Q76N89 1606 aa23.42■■□□□ 1.34
CDH16-207ENST00000568632 LRRC9Q6ZRR7 1453 aa23.41■■□□□ 1.34
CDH16-207ENST00000568632 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
CDH16-207ENST00000568632 RAPGEF6Q8TEU7 1601 aa23.4■■□□□ 1.34
CDH16-207ENST00000568632 PTPRGP23470 1445 aa23.38■■□□□ 1.33
CDH16-207ENST00000568632 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
CDH16-207ENST00000568632 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
CDH16-207ENST00000568632 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
CDH16-207ENST00000568632 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.33
CDH16-207ENST00000568632 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
CDH16-207ENST00000568632 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
CDH16-207ENST00000568632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
CDH16-207ENST00000568632 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
CDH16-207ENST00000568632 ABCA8O94911 1581 aa23.31■■□□□ 1.32
CDH16-207ENST00000568632 MAGI3Q5TCQ9 1506 aa23.3■■□□□ 1.32
CDH16-207ENST00000568632 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
CDH16-207ENST00000568632 UACAQ9BZF9 1416 aa23.23■■□□□ 1.31
CDH16-207ENST00000568632 EHBP1L1Q8N3D4 1523 aa23.22■■□□□ 1.31
CDH16-207ENST00000568632 ATP10BO94823 1461 aa23.19■■□□□ 1.3
CDH16-207ENST00000568632 MYT1Q01538 1121 aa23.18■■□□□ 1.3
CDH16-207ENST00000568632 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
CDH16-207ENST00000568632 SUPT6HQ7KZ85 1726 aaKnown RBP23.15■■□□□ 1.3
CDH16-207ENST00000568632 CDK11AQ9UQ88 783 aaPredicted RBP23.15■■□□□ 1.3
CDH16-207ENST00000568632 ABCC2Q92887 1545 aa23.15■■□□□ 1.3
CDH16-207ENST00000568632 RRBP1Q9P2E9 1410 aaKnown RBP23.15■■□□□ 1.3
CDH16-207ENST00000568632 GTF3C3Q9Y5Q9 886 aa23.14■■□□□ 1.29
CDH16-207ENST00000568632 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
CDH16-207ENST00000568632 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
CDH16-207ENST00000568632 CENPBP07199 599 aaPredicted RBP23.09■■□□□ 1.29
CDH16-207ENST00000568632 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
CDH16-207ENST00000568632 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
CDH16-207ENST00000568632 ARHGEF11O15085 1522 aa23.08■■□□□ 1.29
CDH16-207ENST00000568632 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.28
CDH16-207ENST00000568632 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
CDH16-207ENST00000568632 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
CDH16-207ENST00000568632 ITGAEP38570 1179 aa23.05■■□□□ 1.28
CDH16-207ENST00000568632 ADCY10Q96PN6 1610 aa23.05■■□□□ 1.28
CDH16-207ENST00000568632 KIF14Q15058 1648 aa23.05■■□□□ 1.28
CDH16-207ENST00000568632 MYOM3Q5VTT5 1437 aa23.05■■□□□ 1.28
CDH16-207ENST00000568632 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
CDH16-207ENST00000568632 ZCCHC11Q5TAX3 1644 aaKnown RBP23.02■■□□□ 1.28
CDH16-207ENST00000568632 KDM5BQ9UGL1 1544 aa23■■□□□ 1.27
CDH16-207ENST00000568632 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
CDH16-207ENST00000568632 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
CDH16-207ENST00000568632 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
CDH16-207ENST00000568632 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
CDH16-207ENST00000568632 PTPN23Q9H3S7 1636 aa22.93■■□□□ 1.26
CDH16-207ENST00000568632 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
CDH16-207ENST00000568632 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
CDH16-207ENST00000568632 GPATCH8Q9UKJ3 1502 aaKnown RBP22.9■■□□□ 1.26
CDH16-207ENST00000568632 ZNF644Q9H582 1327 aaPredicted RBP22.89■■□□□ 1.25
CDH16-207ENST00000568632 MIA2Q96PC5 1412 aa22.88■■□□□ 1.25
CDH16-207ENST00000568632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
CDH16-207ENST00000568632 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
CDH16-207ENST00000568632 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms