RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
SCAPER-221ENST00000568549 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
SCAPER-221ENST00000568549 NUP160Q12769 1436 aa12.56□□□□□ -0.4
SCAPER-221ENST00000568549 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
SCAPER-221ENST00000568549 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
SCAPER-221ENST00000568549 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
SCAPER-221ENST00000568549 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
SCAPER-221ENST00000568549 IQGAP2Q13576 1575 aa12.52□□□□□ -0.41
SCAPER-221ENST00000568549 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
SCAPER-221ENST00000568549 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
SCAPER-221ENST00000568549 LOC105371045A0A1W2PR82 267 aa12.48□□□□□ -0.41
SCAPER-221ENST00000568549 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
SCAPER-221ENST00000568549 MSH5O43196 834 aa12.46□□□□□ -0.41
SCAPER-221ENST00000568549 UGGT2Q9NYU1 1516 aa12.44□□□□□ -0.42
SCAPER-221ENST00000568549 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
SCAPER-221ENST00000568549 SAMD9Q5K651 1589 aa12.4□□□□□ -0.42
SCAPER-221ENST00000568549 EFCAB5A4FU69 1503 aa12.4□□□□□ -0.42
SCAPER-221ENST00000568549 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
SCAPER-221ENST00000568549 PRG4Q92954 1404 aaPredicted RBP12.39□□□□□ -0.43
SCAPER-221ENST00000568549 RANGAP1P46060 587 aaPredicted RBP12.39□□□□□ -0.43
SCAPER-221ENST00000568549 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
SCAPER-221ENST00000568549 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
SCAPER-221ENST00000568549 CEP162Q5TB80 1403 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
SCAPER-221ENST00000568549 CLIP1P30622 1438 aa12.36□□□□□ -0.43
SCAPER-221ENST00000568549 ARHGAP35Q9NRY4 1499 aa12.35□□□□□ -0.43
SCAPER-221ENST00000568549 FHOD3Q2V2M9 1422 aa12.32□□□□□ -0.44
SCAPER-221ENST00000568549 P3H3Q8IVL6 736 aa12.32□□□□□ -0.44
SCAPER-221ENST00000568549 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
SCAPER-221ENST00000568549 DNAJC5Q9H3Z4 198 aa12.29□□□□□ -0.44
SCAPER-221ENST00000568549 TTBK1Q5TCY1 1321 aaPredicted RBP12.28□□□□□ -0.44
SCAPER-221ENST00000568549 PTPRGP23470 1445 aa12.28□□□□□ -0.44
SCAPER-221ENST00000568549 FMN1Q68DA7 1419 aa12.25□□□□□ -0.45
SCAPER-221ENST00000568549 RAPGEF6Q8TEU7 1601 aa12.25□□□□□ -0.45
SCAPER-221ENST00000568549 ABCA8O94911 1581 aa12.23□□□□□ -0.45
SCAPER-221ENST00000568549 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
SCAPER-221ENST00000568549 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.45
SCAPER-221ENST00000568549 HECW1Q76N89 1606 aa12.21□□□□□ -0.46
SCAPER-221ENST00000568549 ADCY10Q96PN6 1610 aa12.21□□□□□ -0.46
SCAPER-221ENST00000568549 ABCC2Q92887 1545 aa12.21□□□□□ -0.46
SCAPER-221ENST00000568549 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
SCAPER-221ENST00000568549 UACAQ9BZF9 1416 aa12.2□□□□□ -0.46
SCAPER-221ENST00000568549 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
SCAPER-221ENST00000568549 LRRIQ1Q96JM4 1722 aa12.19□□□□□ -0.46
SCAPER-221ENST00000568549 UHRF1BP1LA0JNW5 1464 aa12.19□□□□□ -0.46
SCAPER-221ENST00000568549 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
SCAPER-221ENST00000568549 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
SCAPER-221ENST00000568549 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
SCAPER-221ENST00000568549 ZCCHC11Q5TAX3 1644 aaKnown RBP12.15□□□□□ -0.46
SCAPER-221ENST00000568549 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
SCAPER-221ENST00000568549 EPRSP07814 1512 aaKnown RBP12.13□□□□□ -0.47
SCAPER-221ENST00000568549 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
SCAPER-221ENST00000568549 CCDC18Q5T9S5 1454 aa12.13□□□□□ -0.47
SCAPER-221ENST00000568549 CFAP43Q8NDM7 1665 aa12.13□□□□□ -0.47
SCAPER-221ENST00000568549 CDK13Q14004 1512 aaKnown RBP12.12□□□□□ -0.47
SCAPER-221ENST00000568549 ARID3CA6NKF2 412 aa12.11□□□□□ -0.47
SCAPER-221ENST00000568549 ATP10BO94823 1461 aa12.1□□□□□ -0.47
SCAPER-221ENST00000568549 NPM1P06748 294 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCAPER-221ENST00000568549 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
SCAPER-221ENST00000568549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
SCAPER-221ENST00000568549 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
SCAPER-221ENST00000568549 MAP3K1Q13233 1512 aa12.07□□□□□ -0.48
SCAPER-221ENST00000568549 MAPKBP1O60336 1514 aa12.06□□□□□ -0.48
SCAPER-221ENST00000568549 APLP2Q06481 763 aa12.05□□□□□ -0.48
SCAPER-221ENST00000568549 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
SCAPER-221ENST00000568549 WDR7Q9Y4E6 1490 aa12.03□□□□□ -0.48
SCAPER-221ENST00000568549 MAGI3Q5TCQ9 1506 aa12.03□□□□□ -0.48
SCAPER-221ENST00000568549 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
SCAPER-221ENST00000568549 CDK11AQ9UQ88 783 aaPredicted RBP12.03□□□□□ -0.48
SCAPER-221ENST00000568549 KIF14Q15058 1648 aa12.01□□□□□ -0.49
SCAPER-221ENST00000568549 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
SCAPER-221ENST00000568549 MTUS2Q5JR59 1369 aa12.01□□□□□ -0.49
SCAPER-221ENST00000568549 TROQ12816 1431 aaPredicted RBP12.01□□□□□ -0.49
SCAPER-221ENST00000568549 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
SCAPER-221ENST00000568549 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
SCAPER-221ENST00000568549 KIF13AQ9H1H9 1805 aa11.99□□□□□ -0.49
SCAPER-221ENST00000568549 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
SCAPER-221ENST00000568549 PIAS4Q8N2W9 510 aaPredicted RBP11.98□□□□□ -0.49
SCAPER-221ENST00000568549 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
SCAPER-221ENST00000568549 ABCC10Q5T3U5 1492 aa11.96□□□□□ -0.49
SCAPER-221ENST00000568549 KCNH8Q96L42 1107 aa11.96□□□□□ -0.49
SCAPER-221ENST00000568549 ABCA9Q8IUA7 1624 aa11.96□□□□□ -0.5
SCAPER-221ENST00000568549 GLI2P10070 1586 aa11.96□□□□□ -0.5
SCAPER-221ENST00000568549 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.5
SCAPER-221ENST00000568549 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
SCAPER-221ENST00000568549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCAPER-221ENST00000568549 CDC42BPAQ5VT25 1732 aa11.94□□□□□ -0.5
SCAPER-221ENST00000568549 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
SCAPER-221ENST00000568549 MAP3K4Q9Y6R4 1608 aa11.93□□□□□ -0.5
SCAPER-221ENST00000568549 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
SCAPER-221ENST00000568549 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
SCAPER-221ENST00000568549 TSPOAP1O95153 1857 aa11.92□□□□□ -0.5
SCAPER-221ENST00000568549 PREX2Q70Z35 1606 aa11.91□□□□□ -0.5
SCAPER-221ENST00000568549 FAM69CQ0P6D2 419 aa11.91□□□□□ -0.5
SCAPER-221ENST00000568549 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
SCAPER-221ENST00000568549 CCNB3Q8WWL7 1395 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms