RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
KLHDC4-223ENST00000568499 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
KLHDC4-223ENST00000568499 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
KLHDC4-223ENST00000568499 JPH4Q96JJ6 628 aa24.25■■□□□ 1.47
KLHDC4-223ENST00000568499 IQGAP2Q13576 1575 aa24.2■■□□□ 1.46
KLHDC4-223ENST00000568499 CTTNBP2Q8WZ74 1663 aa24.16■■□□□ 1.46
KLHDC4-223ENST00000568499 PRG4Q92954 1404 aaPredicted RBP24.13■■□□□ 1.45
KLHDC4-223ENST00000568499 SHROOM2Q13796 1616 aa24.12■■□□□ 1.45
KLHDC4-223ENST00000568499 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
KLHDC4-223ENST00000568499 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
KLHDC4-223ENST00000568499 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
KLHDC4-223ENST00000568499 TNIKQ9UKE5 1360 aa24.06■■□□□ 1.44
KLHDC4-223ENST00000568499 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
KLHDC4-223ENST00000568499 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
KLHDC4-223ENST00000568499 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
KLHDC4-223ENST00000568499 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
KLHDC4-223ENST00000568499 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
KLHDC4-223ENST00000568499 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
KLHDC4-223ENST00000568499 ERCC6L2Q5T890 1561 aa23.96■■□□□ 1.43
KLHDC4-223ENST00000568499 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
KLHDC4-223ENST00000568499 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
KLHDC4-223ENST00000568499 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
KLHDC4-223ENST00000568499 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
KLHDC4-223ENST00000568499 PTPRGP23470 1445 aa23.93■■□□□ 1.42
KLHDC4-223ENST00000568499 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
KLHDC4-223ENST00000568499 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
KLHDC4-223ENST00000568499 SAMD9Q5K651 1589 aa23.89■■□□□ 1.41
KLHDC4-223ENST00000568499 CLIP1P30622 1438 aa23.87■■□□□ 1.41
KLHDC4-223ENST00000568499 CEP162Q5TB80 1403 aa23.84■■□□□ 1.41
KLHDC4-223ENST00000568499 ARHGAP35Q9NRY4 1499 aa23.82■■□□□ 1.4
KLHDC4-223ENST00000568499 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
KLHDC4-223ENST00000568499 FMN1Q68DA7 1419 aa23.76■■□□□ 1.39
KLHDC4-223ENST00000568499 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
KLHDC4-223ENST00000568499 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
KLHDC4-223ENST00000568499 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
KLHDC4-223ENST00000568499 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
KLHDC4-223ENST00000568499 ABCC2Q92887 1545 aa23.67■■□□□ 1.38
KLHDC4-223ENST00000568499 ATP1B4Q9UN42 357 aaPredicted RBP23.65■■□□□ 1.38
KLHDC4-223ENST00000568499 ABCA8O94911 1581 aa23.65■■□□□ 1.38
KLHDC4-223ENST00000568499 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
KLHDC4-223ENST00000568499 ADCY10Q96PN6 1610 aa23.62■■□□□ 1.37
KLHDC4-223ENST00000568499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.57■■□□□ 1.36
KLHDC4-223ENST00000568499 HNRNPUL2Q1KMD3 747 aaKnown RBP23.57■■□□□ 1.36
KLHDC4-223ENST00000568499 CASKIN1Q8WXD9 1431 aa23.57■■□□□ 1.36
KLHDC4-223ENST00000568499 KDM5BQ9UGL1 1544 aa23.55■■□□□ 1.36
KLHDC4-223ENST00000568499 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
KLHDC4-223ENST00000568499 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
KLHDC4-223ENST00000568499 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
KLHDC4-223ENST00000568499 FYCO1Q9BQS8 1478 aa23.53■■□□□ 1.36
KLHDC4-223ENST00000568499 NUP153P49790 1475 aaKnown RBP23.52■■□□□ 1.36
KLHDC4-223ENST00000568499 ATP10BO94823 1461 aa23.49■■□□□ 1.35
KLHDC4-223ENST00000568499 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
KLHDC4-223ENST00000568499 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
KLHDC4-223ENST00000568499 ZCCHC11Q5TAX3 1644 aaKnown RBP23.47■■□□□ 1.35
KLHDC4-223ENST00000568499 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
KLHDC4-223ENST00000568499 MAPKBP1O60336 1514 aa23.45■■□□□ 1.34
KLHDC4-223ENST00000568499 EPRSP07814 1512 aaKnown RBP23.45■■□□□ 1.34
KLHDC4-223ENST00000568499 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
KLHDC4-223ENST00000568499 APLP2Q06481 763 aa23.45■■□□□ 1.34
KLHDC4-223ENST00000568499 ASXL2Q76L83 1435 aa23.43■■□□□ 1.34
KLHDC4-223ENST00000568499 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
KLHDC4-223ENST00000568499 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
KLHDC4-223ENST00000568499 WDR7Q9Y4E6 1490 aa23.37■■□□□ 1.33
KLHDC4-223ENST00000568499 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
KLHDC4-223ENST00000568499 FAM69CQ0P6D2 419 aa23.32■■□□□ 1.32
KLHDC4-223ENST00000568499 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
KLHDC4-223ENST00000568499 MTUS2Q5JR59 1369 aa23.29■■□□□ 1.32
KLHDC4-223ENST00000568499 TROQ12816 1431 aaPredicted RBP23.28■■□□□ 1.32
KLHDC4-223ENST00000568499 MAP3K1Q13233 1512 aa23.28■■□□□ 1.32
KLHDC4-223ENST00000568499 LRRIQ1Q96JM4 1722 aa23.27■■□□□ 1.32
KLHDC4-223ENST00000568499 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
KLHDC4-223ENST00000568499 DIP2BQ9P265 1576 aa23.23■■□□□ 1.31
KLHDC4-223ENST00000568499 GLI2P10070 1586 aa23.22■■□□□ 1.31
KLHDC4-223ENST00000568499 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
KLHDC4-223ENST00000568499 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
KLHDC4-223ENST00000568499 KIF14Q15058 1648 aa23.18■■□□□ 1.3
KLHDC4-223ENST00000568499 LRRC9Q6ZRR7 1453 aa23.17■■□□□ 1.3
KLHDC4-223ENST00000568499 CD109Q6YHK3 1445 aa23.16■■□□□ 1.3
KLHDC4-223ENST00000568499 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
KLHDC4-223ENST00000568499 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
KLHDC4-223ENST00000568499 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
KLHDC4-223ENST00000568499 KIF13AQ9H1H9 1805 aa23.12■■□□□ 1.29
KLHDC4-223ENST00000568499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.29
KLHDC4-223ENST00000568499 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
KLHDC4-223ENST00000568499 TEX14Q8IWB6 1497 aa23.08■■□□□ 1.29
KLHDC4-223ENST00000568499 MAP3K4Q9Y6R4 1608 aa23.08■■□□□ 1.28
KLHDC4-223ENST00000568499 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
KLHDC4-223ENST00000568499 PLCH2O75038 1416 aa23.05■■□□□ 1.28
KLHDC4-223ENST00000568499 TTC37Q6PGP7 1564 aa23.05■■□□□ 1.28
KLHDC4-223ENST00000568499 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
KLHDC4-223ENST00000568499 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
KLHDC4-223ENST00000568499 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
KLHDC4-223ENST00000568499 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
KLHDC4-223ENST00000568499 TSPOAP1O95153 1857 aa23■■□□□ 1.27
KLHDC4-223ENST00000568499 ARAP3Q8WWN8 1544 aa22.99■■□□□ 1.27
KLHDC4-223ENST00000568499 MYO5CQ9NQX4 1742 aa22.99■■□□□ 1.27
KLHDC4-223ENST00000568499 ARHGAP5Q13017 1502 aa22.98■■□□□ 1.27
KLHDC4-223ENST00000568499 GPATCH8Q9UKJ3 1502 aaKnown RBP22.98■■□□□ 1.27
KLHDC4-223ENST00000568499 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
KLHDC4-223ENST00000568499 FANCAO15360 1455 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms