RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
KLHDC4-222ENST00000568444 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
KLHDC4-222ENST00000568444 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
KLHDC4-222ENST00000568444 KIAA0586Q9BVV6 1533 aa23.22■■□□□ 1.31
KLHDC4-222ENST00000568444 IQGAP2Q13576 1575 aa23.21■■□□□ 1.31
KLHDC4-222ENST00000568444 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
KLHDC4-222ENST00000568444 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
KLHDC4-222ENST00000568444 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
KLHDC4-222ENST00000568444 SHROOM2Q13796 1616 aa23.1■■□□□ 1.29
KLHDC4-222ENST00000568444 JPH4Q96JJ6 628 aa23.08■■□□□ 1.29
KLHDC4-222ENST00000568444 UGGT2Q9NYU1 1516 aa23.06■■□□□ 1.28
KLHDC4-222ENST00000568444 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
KLHDC4-222ENST00000568444 CARMIL2Q6F5E8 1435 aa22.99■■□□□ 1.27
KLHDC4-222ENST00000568444 ERCC6L2Q5T890 1561 aa22.98■■□□□ 1.27
KLHDC4-222ENST00000568444 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
KLHDC4-222ENST00000568444 DISP1Q96F81 1524 aa22.97■■□□□ 1.27
KLHDC4-222ENST00000568444 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
KLHDC4-222ENST00000568444 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
KLHDC4-222ENST00000568444 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
KLHDC4-222ENST00000568444 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
KLHDC4-222ENST00000568444 CLIP1P30622 1438 aa22.94■■□□□ 1.26
KLHDC4-222ENST00000568444 P3H3Q8IVL6 736 aa22.93■■□□□ 1.26
KLHDC4-222ENST00000568444 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
KLHDC4-222ENST00000568444 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
KLHDC4-222ENST00000568444 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
KLHDC4-222ENST00000568444 ARHGAP35Q9NRY4 1499 aa22.91■■□□□ 1.26
KLHDC4-222ENST00000568444 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
KLHDC4-222ENST00000568444 FHOD3Q2V2M9 1422 aa22.88■■□□□ 1.25
KLHDC4-222ENST00000568444 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
KLHDC4-222ENST00000568444 PTPRGP23470 1445 aa22.81■■□□□ 1.24
KLHDC4-222ENST00000568444 FMN1Q68DA7 1419 aa22.74■■□□□ 1.23
KLHDC4-222ENST00000568444 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
KLHDC4-222ENST00000568444 PLB1Q6P1J6 1458 aa22.69■■□□□ 1.22
KLHDC4-222ENST00000568444 RAPGEF6Q8TEU7 1601 aa22.68■■□□□ 1.22
KLHDC4-222ENST00000568444 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
KLHDC4-222ENST00000568444 ABCA8O94911 1581 aa22.67■■□□□ 1.22
KLHDC4-222ENST00000568444 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
KLHDC4-222ENST00000568444 ABCC2Q92887 1545 aa22.64■■□□□ 1.21
KLHDC4-222ENST00000568444 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
KLHDC4-222ENST00000568444 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
KLHDC4-222ENST00000568444 ADCY10Q96PN6 1610 aa22.63■■□□□ 1.21
KLHDC4-222ENST00000568444 HECW1Q76N89 1606 aa22.62■■□□□ 1.21
KLHDC4-222ENST00000568444 UHRF1BP1LA0JNW5 1464 aa22.6■■□□□ 1.21
KLHDC4-222ENST00000568444 FYCO1Q9BQS8 1478 aa22.6■■□□□ 1.21
KLHDC4-222ENST00000568444 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
KLHDC4-222ENST00000568444 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
KLHDC4-222ENST00000568444 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
KLHDC4-222ENST00000568444 ZCCHC11Q5TAX3 1644 aaKnown RBP22.52■■□□□ 1.2
KLHDC4-222ENST00000568444 NPM1P06748 294 aaKnown RBP eCLIP22.51■■□□□ 1.19
KLHDC4-222ENST00000568444 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
KLHDC4-222ENST00000568444 CDK13Q14004 1512 aaKnown RBP22.5■■□□□ 1.19
KLHDC4-222ENST00000568444 EPRSP07814 1512 aaKnown RBP22.49■■□□□ 1.19
KLHDC4-222ENST00000568444 KDM5BQ9UGL1 1544 aa22.49■■□□□ 1.19
KLHDC4-222ENST00000568444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
KLHDC4-222ENST00000568444 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
KLHDC4-222ENST00000568444 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
KLHDC4-222ENST00000568444 ATP10BO94823 1461 aa22.47■■□□□ 1.19
KLHDC4-222ENST00000568444 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
KLHDC4-222ENST00000568444 APLP2Q06481 763 aa22.42■■□□□ 1.18
KLHDC4-222ENST00000568444 TIAM1Q13009 1591 aa22.4■■□□□ 1.18
KLHDC4-222ENST00000568444 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
KLHDC4-222ENST00000568444 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
KLHDC4-222ENST00000568444 ASXL2Q76L83 1435 aa22.36■■□□□ 1.17
KLHDC4-222ENST00000568444 MAP3K1Q13233 1512 aa22.34■■□□□ 1.17
KLHDC4-222ENST00000568444 WDR7Q9Y4E6 1490 aa22.34■■□□□ 1.17
KLHDC4-222ENST00000568444 PLEKHD1A6NEE1 506 aa22.33■■□□□ 1.17
KLHDC4-222ENST00000568444 MTUS2Q5JR59 1369 aa22.31■■□□□ 1.16
KLHDC4-222ENST00000568444 MAGI3Q5TCQ9 1506 aa22.31■■□□□ 1.16
KLHDC4-222ENST00000568444 EHBP1L1Q8N3D4 1523 aa22.29■■□□□ 1.16
KLHDC4-222ENST00000568444 TROQ12816 1431 aaPredicted RBP22.29■■□□□ 1.16
KLHDC4-222ENST00000568444 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
KLHDC4-222ENST00000568444 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
KLHDC4-222ENST00000568444 KIF14Q15058 1648 aa22.25■■□□□ 1.15
KLHDC4-222ENST00000568444 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
KLHDC4-222ENST00000568444 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
KLHDC4-222ENST00000568444 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
KLHDC4-222ENST00000568444 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
KLHDC4-222ENST00000568444 ABCC10Q5T3U5 1492 aa22.2■■□□□ 1.14
KLHDC4-222ENST00000568444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.16■■□□□ 1.14
KLHDC4-222ENST00000568444 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
KLHDC4-222ENST00000568444 TTC37Q6PGP7 1564 aa22.16■■□□□ 1.14
KLHDC4-222ENST00000568444 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
KLHDC4-222ENST00000568444 GLI2P10070 1586 aa22.15■■□□□ 1.14
KLHDC4-222ENST00000568444 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
KLHDC4-222ENST00000568444 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
KLHDC4-222ENST00000568444 NCOA2Q15596 1464 aa22.14■■□□□ 1.13
KLHDC4-222ENST00000568444 MAP3K4Q9Y6R4 1608 aa22.09■■□□□ 1.13
KLHDC4-222ENST00000568444 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
KLHDC4-222ENST00000568444 CCNB3Q8WWL7 1395 aa22.09■■□□□ 1.13
KLHDC4-222ENST00000568444 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
KLHDC4-222ENST00000568444 ITSN2Q9NZM3 1697 aa22.06■■□□□ 1.12
KLHDC4-222ENST00000568444 CDC42BPAQ5VT25 1732 aa22.06■■□□□ 1.12
KLHDC4-222ENST00000568444 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
KLHDC4-222ENST00000568444 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
KLHDC4-222ENST00000568444 ARHGAP5Q13017 1502 aa22.02■■□□□ 1.12
KLHDC4-222ENST00000568444 GPATCH8Q9UKJ3 1502 aaKnown RBP22.02■■□□□ 1.12
KLHDC4-222ENST00000568444 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
KLHDC4-222ENST00000568444 CDC42BPBQ9Y5S2 1711 aa22■■□□□ 1.11
KLHDC4-222ENST00000568444 PLCH2O75038 1416 aa22■■□□□ 1.11
KLHDC4-222ENST00000568444 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms