RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 KIF27Q86VH2 1401 aa27.69■■■□□ 2.02
AC009041.2-204ENST00000568394 NESP48681 1621 aa27.66■■■□□ 2.02
AC009041.2-204ENST00000568394 CUX1P39880 1505 aa27.63■■■□□ 2.01
AC009041.2-204ENST00000568394 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 DEKP35659 375 aaKnown RBP27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 FBLN2P98095 1184 aa27.62■■■□□ 2.01
AC009041.2-204ENST00000568394 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
AC009041.2-204ENST00000568394 KIF21BO75037 1637 aa27.6■■■□□ 2.01
AC009041.2-204ENST00000568394 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
AC009041.2-204ENST00000568394 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
AC009041.2-204ENST00000568394 CARMIL1Q5VZK9 1371 aa27.56■■■□□ 2
AC009041.2-204ENST00000568394 B4GALNT3Q6L9W6 998 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 RAB3GAP2Q9H2M9 1393 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 CADPSQ9ULU8 1353 aa27.5■■□□□ 1.99
AC009041.2-204ENST00000568394 IGF1RP08069 1367 aa27.49■■□□□ 1.99
AC009041.2-204ENST00000568394 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
AC009041.2-204ENST00000568394 PRKCSHP14314 528 aaPredicted RBP27.48■■□□□ 1.99
AC009041.2-204ENST00000568394 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
AC009041.2-204ENST00000568394 SENP3-EIF4A1A0A087X0R7 540 aa27.47■■□□□ 1.99
AC009041.2-204ENST00000568394 FHOD3Q2V2M9 1422 aa27.44■■□□□ 1.98
AC009041.2-204ENST00000568394 PEG3Q9GZU2 1588 aa27.42■■□□□ 1.98
AC009041.2-204ENST00000568394 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
AC009041.2-204ENST00000568394 RTN4Q9NQC3 1192 aaKnown RBP27.4■■□□□ 1.98
AC009041.2-204ENST00000568394 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
AC009041.2-204ENST00000568394 RRP7BPQ9NSQ0 103 aa27.37■■□□□ 1.97
AC009041.2-204ENST00000568394 FANCIQ9NVI1 1328 aa27.36■■□□□ 1.97
AC009041.2-204ENST00000568394 CFTRP13569 1480 aa27.36■■□□□ 1.97
AC009041.2-204ENST00000568394 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
AC009041.2-204ENST00000568394 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
AC009041.2-204ENST00000568394 RTL5Q5HYW3 569 aaPredicted RBP27.33■■□□□ 1.97
AC009041.2-204ENST00000568394 ANO8Q9HCE9 1232 aaPredicted RBP27.33■■□□□ 1.96
AC009041.2-204ENST00000568394 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
AC009041.2-204ENST00000568394 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
AC009041.2-204ENST00000568394 POLR3GLQ9BT43 218 aa27.28■■□□□ 1.96
AC009041.2-204ENST00000568394 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
AC009041.2-204ENST00000568394 FOXD1Q16676 465 aa27.26■■□□□ 1.96
AC009041.2-204ENST00000568394 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
AC009041.2-204ENST00000568394 TONSLQ96HA7 1378 aa27.25■■□□□ 1.95
AC009041.2-204ENST00000568394 NOP58Q9Y2X3 529 aaKnown RBP27.24■■□□□ 1.95
AC009041.2-204ENST00000568394 CCDC136Q96JN2 1154 aa27.24■■□□□ 1.95
AC009041.2-204ENST00000568394 NPM2Q86SE8 214 aaKnown RBP27.23■■□□□ 1.95
AC009041.2-204ENST00000568394 PPP4R2Q9NY27 417 aa27.23■■□□□ 1.95
AC009041.2-204ENST00000568394 PAK3O75914 559 aaPredicted RBP27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 ZNF777Q9ULD5 760 aaPredicted RBP27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 PHLDB1Q86UU1 1377 aa27.22■■□□□ 1.95
AC009041.2-204ENST00000568394 SETD5Q9C0A6 1442 aa27.17■■□□□ 1.94
AC009041.2-204ENST00000568394 MTUS2Q5JR59 1369 aa27.15■■□□□ 1.94
AC009041.2-204ENST00000568394 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
AC009041.2-204ENST00000568394 MYT1LQ9UL68 1186 aa27.13■■□□□ 1.93
AC009041.2-204ENST00000568394 ANP32AP39687 249 aaKnown RBP27.12■■□□□ 1.93
AC009041.2-204ENST00000568394 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 RRBP1Q9P2E9 1410 aaKnown RBP27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 MRS2Q9HD23 443 aa27.11■■□□□ 1.93
AC009041.2-204ENST00000568394 SALL2Q9Y467 1007 aaPredicted RBP27.09■■□□□ 1.93
AC009041.2-204ENST00000568394 CCDC184Q52MB2 194 aa27.08■■□□□ 1.93
AC009041.2-204ENST00000568394 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
AC009041.2-204ENST00000568394 ZBTB47Q9UFB7 747 aaPredicted RBP27.07■■□□□ 1.92
AC009041.2-204ENST00000568394 MAPKBP1O60336 1514 aa27.03■■□□□ 1.92
AC009041.2-204ENST00000568394 IL27Q8NEV9 243 aa27.01■■□□□ 1.92
AC009041.2-204ENST00000568394 LAS1LQ9Y4W2 734 aaKnown RBP27■■□□□ 1.91
AC009041.2-204ENST00000568394 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
AC009041.2-204ENST00000568394 AQRO60306 1485 aaKnown RBP eCLIP26.99■■□□□ 1.91
AC009041.2-204ENST00000568394 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
AC009041.2-204ENST00000568394 HSPA5P11021 654 aaKnown RBP26.93■■□□□ 1.9
AC009041.2-204ENST00000568394 EIF5BO60841 1220 aaKnown RBP26.91■■□□□ 1.9
AC009041.2-204ENST00000568394 TOPBP1Q92547 1522 aa26.9■■□□□ 1.9
AC009041.2-204ENST00000568394 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
AC009041.2-204ENST00000568394 ZNF644Q9H582 1327 aaPredicted RBP26.89■■□□□ 1.9
AC009041.2-204ENST00000568394 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
AC009041.2-204ENST00000568394 TIMELESSQ9UNS1 1208 aa26.85■■□□□ 1.89
AC009041.2-204ENST00000568394 CHMP7Q8WUX9 453 aaPredicted RBP26.83■■□□□ 1.89
AC009041.2-204ENST00000568394 LRRC9Q6ZRR7 1453 aa26.83■■□□□ 1.89
AC009041.2-204ENST00000568394 IPO9Q96P70 1041 aaKnown RBP26.82■■□□□ 1.88
AC009041.2-204ENST00000568394 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
AC009041.2-204ENST00000568394 WASHC2AQ641Q2 1341 aa26.81■■□□□ 1.88
AC009041.2-204ENST00000568394 NEFMP07197 916 aa26.81■■□□□ 1.88
AC009041.2-204ENST00000568394 URB2Q14146 1524 aaKnown RBP26.78■■□□□ 1.88
AC009041.2-204ENST00000568394 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
AC009041.2-204ENST00000568394 ERICH6BQ5W0A0 696 aa26.75■■□□□ 1.87
AC009041.2-204ENST00000568394 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
AC009041.2-204ENST00000568394 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
AC009041.2-204ENST00000568394 PRKRIP1Q9H875 184 aaPredicted RBP26.7■■□□□ 1.86
AC009041.2-204ENST00000568394 KDM2AQ9Y2K7 1162 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 TIAM1Q13009 1591 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
AC009041.2-204ENST00000568394 C11orf95C9JLR9 678 aaPredicted RBP26.64■■□□□ 1.85
AC009041.2-204ENST00000568394 SENP3Q9H4L4 574 aaPredicted RBP26.64■■□□□ 1.85
AC009041.2-204ENST00000568394 PTPRKQ15262 1439 aa26.62■■□□□ 1.85
AC009041.2-204ENST00000568394 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
AC009041.2-204ENST00000568394 ZBED9Q6R2W3 1325 aa26.61■■□□□ 1.85
AC009041.2-204ENST00000568394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.59■■□□□ 1.85
AC009041.2-204ENST00000568394 ZNF608Q9ULD9 1512 aaPredicted RBP26.58■■□□□ 1.85
AC009041.2-204ENST00000568394 DAXXQ9UER7 740 aaPredicted RBP26.58■■□□□ 1.85
AC009041.2-204ENST00000568394 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
AC009041.2-204ENST00000568394 L3MBTL2Q969R5 705 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 FGD6Q6ZV73 1430 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
AC009041.2-204ENST00000568394 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms