RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 CSRNP3Q8WYN3 585 aa21.22■□□□□ 0.99
GINS3-209ENST00000567909 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
GINS3-209ENST00000567909 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
GINS3-209ENST00000567909 ARAP1Q96P48 1450 aa21.19■□□□□ 0.98
GINS3-209ENST00000567909 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
GINS3-209ENST00000567909 JPH4Q96JJ6 628 aa21.18■□□□□ 0.98
GINS3-209ENST00000567909 ERCC6L2Q5T890 1561 aa21.18■□□□□ 0.98
GINS3-209ENST00000567909 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
GINS3-209ENST00000567909 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
GINS3-209ENST00000567909 IQGAP2Q13576 1575 aa21.14■□□□□ 0.97
GINS3-209ENST00000567909 CTTNBP2Q8WZ74 1663 aa21.13■□□□□ 0.97
GINS3-209ENST00000567909 KIF21BO75037 1637 aa21.04■□□□□ 0.96
GINS3-209ENST00000567909 EHMT2Q96KQ7 1210 aa21.02■□□□□ 0.96
GINS3-209ENST00000567909 CARMIL2Q6F5E8 1435 aa20.99■□□□□ 0.95
GINS3-209ENST00000567909 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
GINS3-209ENST00000567909 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
GINS3-209ENST00000567909 DISP1Q96F81 1524 aa20.95■□□□□ 0.94
GINS3-209ENST00000567909 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
GINS3-209ENST00000567909 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
GINS3-209ENST00000567909 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
GINS3-209ENST00000567909 PTPRGP23470 1445 aa20.9■□□□□ 0.94
GINS3-209ENST00000567909 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
GINS3-209ENST00000567909 RANGAP1P46060 587 aaPredicted RBP20.89■□□□□ 0.93
GINS3-209ENST00000567909 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
GINS3-209ENST00000567909 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
GINS3-209ENST00000567909 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
GINS3-209ENST00000567909 NPM1P06748 294 aaKnown RBP eCLIP20.76■□□□□ 0.91
GINS3-209ENST00000567909 UACAQ9BZF9 1416 aa20.75■□□□□ 0.91
GINS3-209ENST00000567909 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
GINS3-209ENST00000567909 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
GINS3-209ENST00000567909 ABCC2Q92887 1545 aa20.72■□□□□ 0.91
GINS3-209ENST00000567909 FHOD3Q2V2M9 1422 aa20.71■□□□□ 0.91
GINS3-209ENST00000567909 PLB1Q6P1J6 1458 aa20.71■□□□□ 0.91
GINS3-209ENST00000567909 UHRF1BP1LA0JNW5 1464 aa20.7■□□□□ 0.9
GINS3-209ENST00000567909 ABCA8O94911 1581 aa20.68■□□□□ 0.9
GINS3-209ENST00000567909 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
GINS3-209ENST00000567909 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
GINS3-209ENST00000567909 ZCCHC11Q5TAX3 1644 aaKnown RBP20.63■□□□□ 0.89
GINS3-209ENST00000567909 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
GINS3-209ENST00000567909 RAPGEF6Q8TEU7 1601 aa20.61■□□□□ 0.89
GINS3-209ENST00000567909 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
GINS3-209ENST00000567909 KIF13AQ9H1H9 1805 aa20.6■□□□□ 0.89
GINS3-209ENST00000567909 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
GINS3-209ENST00000567909 CLIP1P30622 1438 aa20.56■□□□□ 0.88
GINS3-209ENST00000567909 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
GINS3-209ENST00000567909 ABCC10Q5T3U5 1492 aa20.53■□□□□ 0.88
GINS3-209ENST00000567909 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
GINS3-209ENST00000567909 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
GINS3-209ENST00000567909 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
GINS3-209ENST00000567909 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
GINS3-209ENST00000567909 ATP10BO94823 1461 aa20.5■□□□□ 0.87
GINS3-209ENST00000567909 ATP1B4Q9UN42 357 aaPredicted RBP20.5■□□□□ 0.87
GINS3-209ENST00000567909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
GINS3-209ENST00000567909 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
GINS3-209ENST00000567909 CEP162Q5TB80 1403 aa20.49■□□□□ 0.87
GINS3-209ENST00000567909 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
GINS3-209ENST00000567909 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
GINS3-209ENST00000567909 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
GINS3-209ENST00000567909 EPRSP07814 1512 aaKnown RBP20.43■□□□□ 0.86
GINS3-209ENST00000567909 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
GINS3-209ENST00000567909 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
GINS3-209ENST00000567909 PCF11O94913 1555 aaKnown RBP20.42■□□□□ 0.86
GINS3-209ENST00000567909 GLI2P10070 1586 aa20.4■□□□□ 0.86
GINS3-209ENST00000567909 LRRIQ1Q96JM4 1722 aa20.39■□□□□ 0.86
GINS3-209ENST00000567909 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
GINS3-209ENST00000567909 MAP3K4Q9Y6R4 1608 aa20.35■□□□□ 0.85
GINS3-209ENST00000567909 PLEKHD1A6NEE1 506 aa20.35■□□□□ 0.85
GINS3-209ENST00000567909 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
GINS3-209ENST00000567909 PPRC1Q5VV67 1664 aaKnown RBP20.32■□□□□ 0.84
GINS3-209ENST00000567909 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
GINS3-209ENST00000567909 CCDC18Q5T9S5 1454 aa20.3■□□□□ 0.84
GINS3-209ENST00000567909 CDK11AQ9UQ88 783 aaPredicted RBP20.28■□□□□ 0.84
GINS3-209ENST00000567909 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
GINS3-209ENST00000567909 ABCA9Q8IUA7 1624 aa20.27■□□□□ 0.83
GINS3-209ENST00000567909 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
GINS3-209ENST00000567909 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
GINS3-209ENST00000567909 TROQ12816 1431 aaPredicted RBP20.21■□□□□ 0.83
GINS3-209ENST00000567909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83
GINS3-209ENST00000567909 TTC37Q6PGP7 1564 aa20.21■□□□□ 0.83
GINS3-209ENST00000567909 KDM6BO15054 1643 aa20.2■□□□□ 0.82
GINS3-209ENST00000567909 KIF14Q15058 1648 aa20.2■□□□□ 0.82
GINS3-209ENST00000567909 MAGI3Q5TCQ9 1506 aa20.2■□□□□ 0.82
GINS3-209ENST00000567909 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
GINS3-209ENST00000567909 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
GINS3-209ENST00000567909 TIAM1Q13009 1591 aa20.09■□□□□ 0.81
GINS3-209ENST00000567909 COL17A1Q9UMD9 1497 aaPredicted RBP20.09■□□□□ 0.81
GINS3-209ENST00000567909 FANCAO15360 1455 aa20.07■□□□□ 0.8
GINS3-209ENST00000567909 NEO1Q92859 1461 aa20.07■□□□□ 0.8
GINS3-209ENST00000567909 CFAP74Q9C0B2 1584 aa20.07■□□□□ 0.8
GINS3-209ENST00000567909 EHBP1L1Q8N3D4 1523 aa20.07■□□□□ 0.8
GINS3-209ENST00000567909 PLCH2O75038 1416 aa20.06■□□□□ 0.8
GINS3-209ENST00000567909 CDC42BPAQ5VT25 1732 aa20.05■□□□□ 0.8
GINS3-209ENST00000567909 CDC42BPBQ9Y5S2 1711 aa20.05■□□□□ 0.8
GINS3-209ENST00000567909 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
GINS3-209ENST00000567909 APLP2Q06481 763 aa20.03■□□□□ 0.8
GINS3-209ENST00000567909 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
GINS3-209ENST00000567909 AKNAQ7Z591 1439 aa20.02■□□□□ 0.8
GINS3-209ENST00000567909 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
GINS3-209ENST00000567909 PREX2Q70Z35 1606 aa20.02■□□□□ 0.8
GINS3-209ENST00000567909 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms