RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
TCF4-236ENST00000567880 FBLN2P98095 1184 aa16.65■□□□□ 0.26
TCF4-236ENST00000567880 SYNJ2O15056 1496 aa16.65■□□□□ 0.26
TCF4-236ENST00000567880 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
TCF4-236ENST00000567880 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
TCF4-236ENST00000567880 CLIP1P30622 1438 aa16.63■□□□□ 0.25
TCF4-236ENST00000567880 CHD1O14646 1710 aa16.62■□□□□ 0.25
TCF4-236ENST00000567880 CEP170Q5SW79 1584 aa16.56■□□□□ 0.24
TCF4-236ENST00000567880 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
TCF4-236ENST00000567880 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.24
TCF4-236ENST00000567880 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
TCF4-236ENST00000567880 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
TCF4-236ENST00000567880 NUP160Q12769 1436 aa16.49■□□□□ 0.23
TCF4-236ENST00000567880 P3H3Q8IVL6 736 aa16.49■□□□□ 0.23
TCF4-236ENST00000567880 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
TCF4-236ENST00000567880 RTN4Q9NQC3 1192 aaKnown RBP16.46■□□□□ 0.23
TCF4-236ENST00000567880 SAMD9Q5K651 1589 aa16.46■□□□□ 0.22
TCF4-236ENST00000567880 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
TCF4-236ENST00000567880 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
TCF4-236ENST00000567880 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
TCF4-236ENST00000567880 KIAA0556O60303 1618 aa16.38■□□□□ 0.21
TCF4-236ENST00000567880 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
TCF4-236ENST00000567880 KCNA4P22459 653 aa16.37■□□□□ 0.21
TCF4-236ENST00000567880 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
TCF4-236ENST00000567880 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
TCF4-236ENST00000567880 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
TCF4-236ENST00000567880 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
TCF4-236ENST00000567880 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
TCF4-236ENST00000567880 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
TCF4-236ENST00000567880 FMN1Q68DA7 1419 aa16.33■□□□□ 0.2
TCF4-236ENST00000567880 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
TCF4-236ENST00000567880 APLP2Q06481 763 aa16.31■□□□□ 0.2
TCF4-236ENST00000567880 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
TCF4-236ENST00000567880 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
TCF4-236ENST00000567880 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
TCF4-236ENST00000567880 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.19
TCF4-236ENST00000567880 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
TCF4-236ENST00000567880 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
TCF4-236ENST00000567880 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
TCF4-236ENST00000567880 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
TCF4-236ENST00000567880 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
TCF4-236ENST00000567880 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.19
TCF4-236ENST00000567880 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
TCF4-236ENST00000567880 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
TCF4-236ENST00000567880 PTPRGP23470 1445 aa16.17■□□□□ 0.18
TCF4-236ENST00000567880 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
TCF4-236ENST00000567880 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
TCF4-236ENST00000567880 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
TCF4-236ENST00000567880 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
TCF4-236ENST00000567880 ABCA8O94911 1581 aa16.13■□□□□ 0.17
TCF4-236ENST00000567880 EPRSP07814 1512 aaKnown RBP16.13■□□□□ 0.17
TCF4-236ENST00000567880 NUP153P49790 1475 aaKnown RBP16.13■□□□□ 0.17
TCF4-236ENST00000567880 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
TCF4-236ENST00000567880 AMER1Q5JTC6 1135 aaPredicted RBP16.12■□□□□ 0.17
TCF4-236ENST00000567880 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
TCF4-236ENST00000567880 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
TCF4-236ENST00000567880 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
TCF4-236ENST00000567880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
TCF4-236ENST00000567880 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
TCF4-236ENST00000567880 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
TCF4-236ENST00000567880 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
TCF4-236ENST00000567880 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
TCF4-236ENST00000567880 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
TCF4-236ENST00000567880 ABCC2Q92887 1545 aa16.04■□□□□ 0.16
TCF4-236ENST00000567880 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
TCF4-236ENST00000567880 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
TCF4-236ENST00000567880 ATP10BO94823 1461 aa16.01■□□□□ 0.15
TCF4-236ENST00000567880 ADCY10Q96PN6 1610 aa16■□□□□ 0.15
TCF4-236ENST00000567880 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
TCF4-236ENST00000567880 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
TCF4-236ENST00000567880 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
TCF4-236ENST00000567880 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
TCF4-236ENST00000567880 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
TCF4-236ENST00000567880 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
TCF4-236ENST00000567880 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
TCF4-236ENST00000567880 NCOA2Q15596 1464 aa15.96■□□□□ 0.15
TCF4-236ENST00000567880 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
TCF4-236ENST00000567880 TROQ12816 1431 aaPredicted RBP15.94■□□□□ 0.14
TCF4-236ENST00000567880 KIF14Q15058 1648 aa15.93■□□□□ 0.14
TCF4-236ENST00000567880 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
TCF4-236ENST00000567880 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
TCF4-236ENST00000567880 CYB5RLQ6IPT4 315 aa15.89■□□□□ 0.13
TCF4-236ENST00000567880 CCNB3Q8WWL7 1395 aa15.89■□□□□ 0.13
TCF4-236ENST00000567880 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
TCF4-236ENST00000567880 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
TCF4-236ENST00000567880 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
TCF4-236ENST00000567880 FAM50AQ14320 339 aaKnown RBP15.86■□□□□ 0.13
TCF4-236ENST00000567880 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
TCF4-236ENST00000567880 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
TCF4-236ENST00000567880 CDC42BPAQ5VT25 1732 aa15.84■□□□□ 0.13
TCF4-236ENST00000567880 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
TCF4-236ENST00000567880 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.12
TCF4-236ENST00000567880 ITGAEP38570 1179 aa15.82■□□□□ 0.12
TCF4-236ENST00000567880 TTC37Q6PGP7 1564 aa15.81■□□□□ 0.12
TCF4-236ENST00000567880 ABCC10Q5T3U5 1492 aa15.81■□□□□ 0.12
TCF4-236ENST00000567880 WDR7Q9Y4E6 1490 aa15.81■□□□□ 0.12
TCF4-236ENST00000567880 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
TCF4-236ENST00000567880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.79■□□□□ 0.12
TCF4-236ENST00000567880 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
TCF4-236ENST00000567880 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms