RNA–Protein interactions for RNA: ENST00000567801.2

LINC01544-201, Transcript of long intergenic non-protein coding RNA 1544, humanhuman

TSL 2 BASIC

Gene LINC01544, Length 5,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01544-201ENST00000567801 ZNF326Q5BKZ1 582 aaKnown RBP16.05■□□□□ 0.16
LINC01544-201ENST00000567801 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
LINC01544-201ENST00000567801 MYO15BQ96JP2 1530 aa16.05■□□□□ 0.16
LINC01544-201ENST00000567801 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
LINC01544-201ENST00000567801 DNTTIP2Q5QJE6 756 aaKnown RBP16.02■□□□□ 0.16
LINC01544-201ENST00000567801 HSP90AA2PQ14568 343 aaPredicted RBP16■□□□□ 0.15
LINC01544-201ENST00000567801 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
LINC01544-201ENST00000567801 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
LINC01544-201ENST00000567801 PKNOX2Q96KN3 472 aa15.98■□□□□ 0.15
LINC01544-201ENST00000567801 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
LINC01544-201ENST00000567801 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
LINC01544-201ENST00000567801 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
LINC01544-201ENST00000567801 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
LINC01544-201ENST00000567801 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
LINC01544-201ENST00000567801 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
LINC01544-201ENST00000567801 USP35Q9P2H5 1018 aa15.91■□□□□ 0.14
LINC01544-201ENST00000567801 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
LINC01544-201ENST00000567801 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
LINC01544-201ENST00000567801 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
LINC01544-201ENST00000567801 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
LINC01544-201ENST00000567801 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
LINC01544-201ENST00000567801 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
LINC01544-201ENST00000567801 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
LINC01544-201ENST00000567801 CHAF1AQ13111 956 aaPredicted RBP15.81■□□□□ 0.12
LINC01544-201ENST00000567801 CCER2I3L3R5 266 aa15.81■□□□□ 0.12
LINC01544-201ENST00000567801 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
LINC01544-201ENST00000567801 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC01544-201ENST00000567801 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
LINC01544-201ENST00000567801 TNNT3P45378 269 aaPredicted RBP15.76■□□□□ 0.11
LINC01544-201ENST00000567801 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
LINC01544-201ENST00000567801 ESF1Q9H501 851 aaKnown RBP15.74■□□□□ 0.11
LINC01544-201ENST00000567801 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01544-201ENST00000567801 GSE1Q14687 1217 aa15.74■□□□□ 0.11
LINC01544-201ENST00000567801 GOLGA6L3A6NEY3 463 aa15.73■□□□□ 0.11
LINC01544-201ENST00000567801 WDR43Q15061 677 aaKnown RBP eCLIP15.73■□□□□ 0.11
LINC01544-201ENST00000567801 TCERG1O14776 1098 aaKnown RBP15.72■□□□□ 0.11
LINC01544-201ENST00000567801 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
LINC01544-201ENST00000567801 PTMSP20962 102 aa15.69■□□□□ 0.1
LINC01544-201ENST00000567801 ARID3AQ99856 593 aa15.69■□□□□ 0.1
LINC01544-201ENST00000567801 RGS3P49796 1198 aa15.67■□□□□ 0.1
LINC01544-201ENST00000567801 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
LINC01544-201ENST00000567801 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
LINC01544-201ENST00000567801 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
LINC01544-201ENST00000567801 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
LINC01544-201ENST00000567801 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
LINC01544-201ENST00000567801 UBE2Q2Q8WVN8 375 aa15.61■□□□□ 0.09
LINC01544-201ENST00000567801 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
LINC01544-201ENST00000567801 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
LINC01544-201ENST00000567801 PLCB2Q00722 1185 aa15.6■□□□□ 0.09
LINC01544-201ENST00000567801 GOLGA6L6A8MZA4 724 aa15.59■□□□□ 0.09
LINC01544-201ENST00000567801 GBP4Q96PP9 640 aa15.59■□□□□ 0.09
LINC01544-201ENST00000567801 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
LINC01544-201ENST00000567801 GZF1Q9H116 711 aaPredicted RBP15.59■□□□□ 0.09
LINC01544-201ENST00000567801 RSF1Q96T23 1441 aaPredicted RBP15.58■□□□□ 0.08
LINC01544-201ENST00000567801 NRDCO43847 1150 aa15.56■□□□□ 0.08
LINC01544-201ENST00000567801 ZRSR1Q15695 479 aaKnown RBP15.54■□□□□ 0.08
LINC01544-201ENST00000567801 CASC1Q6TDU7 716 aa15.53■□□□□ 0.08
LINC01544-201ENST00000567801 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
LINC01544-201ENST00000567801 SLKQ9H2G2 1235 aaPredicted RBP15.52■□□□□ 0.07
LINC01544-201ENST00000567801 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
LINC01544-201ENST00000567801 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
LINC01544-201ENST00000567801 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
LINC01544-201ENST00000567801 IL27Q8NEV9 243 aa15.51■□□□□ 0.07
LINC01544-201ENST00000567801 MAP7D2Q96T17 732 aa15.5■□□□□ 0.07
LINC01544-201ENST00000567801 CLIP1P30622 1438 aa15.49■□□□□ 0.07
LINC01544-201ENST00000567801 SPRYD3Q8NCJ5 442 aa15.48■□□□□ 0.07
LINC01544-201ENST00000567801 CHIC2Q9UKJ5 165 aa15.48■□□□□ 0.07
LINC01544-201ENST00000567801 EEA1Q15075 1411 aa15.48■□□□□ 0.07
LINC01544-201ENST00000567801 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
LINC01544-201ENST00000567801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC01544-201ENST00000567801 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.07
LINC01544-201ENST00000567801 MTERF4Q7Z6M4 381 aaKnown RBP15.46■□□□□ 0.07
LINC01544-201ENST00000567801 NACADO15069 1562 aa15.46■□□□□ 0.06
LINC01544-201ENST00000567801 ZNF771Q7L3S4 317 aaPredicted RBP15.46■□□□□ 0.06
LINC01544-201ENST00000567801 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
LINC01544-201ENST00000567801 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.44■□□□□ 0.06
LINC01544-201ENST00000567801 FAM13BQ9NYF5 915 aa15.44■□□□□ 0.06
LINC01544-201ENST00000567801 RRP9O43818 475 aaKnown RBP15.43■□□□□ 0.06
LINC01544-201ENST00000567801 TPM2P07951 284 aa15.43■□□□□ 0.06
LINC01544-201ENST00000567801 DDX11L8A8MPP1 907 aa15.43■□□□□ 0.06
LINC01544-201ENST00000567801 ZBTB7CA1YPR0 619 aa15.42■□□□□ 0.06
LINC01544-201ENST00000567801 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
LINC01544-201ENST00000567801 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
LINC01544-201ENST00000567801 FTSJ3Q8IY81 847 aaKnown RBP15.42■□□□□ 0.06
LINC01544-201ENST00000567801 PDE4AP27815 886 aa15.41■□□□□ 0.06
LINC01544-201ENST00000567801 SYAP1Q96A49 352 aaPredicted RBP15.39■□□□□ 0.05
LINC01544-201ENST00000567801 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
LINC01544-201ENST00000567801 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
LINC01544-201ENST00000567801 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
LINC01544-201ENST00000567801 MS4A1P11836 297 aa15.38■□□□□ 0.05
LINC01544-201ENST00000567801 CSPP1Q1MSJ5 1256 aa15.38■□□□□ 0.05
LINC01544-201ENST00000567801 RCAN3Q9UKA8 241 aa15.37■□□□□ 0.05
LINC01544-201ENST00000567801 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
LINC01544-201ENST00000567801 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
LINC01544-201ENST00000567801 APPP05067 770 aa15.36■□□□□ 0.05
LINC01544-201ENST00000567801 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
LINC01544-201ENST00000567801 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
LINC01544-201ENST00000567801 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
LINC01544-201ENST00000567801 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
LINC01544-201ENST00000567801 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms