RNA–Protein interactions for RNA: ENST00000567306.5

PDXDC1-215, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-215ENST00000567306 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
PDXDC1-215ENST00000567306 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
PDXDC1-215ENST00000567306 UBTFP17480 764 aaKnown RBP12.06□□□□□ -0.48
PDXDC1-215ENST00000567306 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
PDXDC1-215ENST00000567306 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
PDXDC1-215ENST00000567306 FHAD1B1AJZ9 1412 aa12.04□□□□□ -0.48
PDXDC1-215ENST00000567306 MAGI1Q96QZ7 1491 aaPredicted RBP12.02□□□□□ -0.48
PDXDC1-215ENST00000567306 CTTNBP2Q8WZ74 1663 aa12□□□□□ -0.49
PDXDC1-215ENST00000567306 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
PDXDC1-215ENST00000567306 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
PDXDC1-215ENST00000567306 CLIP1P30622 1438 aa11.98□□□□□ -0.49
PDXDC1-215ENST00000567306 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
PDXDC1-215ENST00000567306 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
PDXDC1-215ENST00000567306 ARHGAP35Q9NRY4 1499 aa11.93□□□□□ -0.5
PDXDC1-215ENST00000567306 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
PDXDC1-215ENST00000567306 CHD1O14646 1710 aa11.91□□□□□ -0.5
PDXDC1-215ENST00000567306 IQGAP2Q13576 1575 aa11.91□□□□□ -0.5
PDXDC1-215ENST00000567306 NUP160Q12769 1436 aa11.9□□□□□ -0.5
PDXDC1-215ENST00000567306 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
PDXDC1-215ENST00000567306 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-215ENST00000567306 EFCAB5A4FU69 1503 aa11.89□□□□□ -0.51
PDXDC1-215ENST00000567306 CHMP7Q8WUX9 453 aaPredicted RBP11.88□□□□□ -0.51
PDXDC1-215ENST00000567306 KIAA0586Q9BVV6 1533 aa11.87□□□□□ -0.51
PDXDC1-215ENST00000567306 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
PDXDC1-215ENST00000567306 KCNA4P22459 653 aa11.86□□□□□ -0.51
PDXDC1-215ENST00000567306 FBLN2P98095 1184 aa11.86□□□□□ -0.51
PDXDC1-215ENST00000567306 UGGT2Q9NYU1 1516 aa11.86□□□□□ -0.51
PDXDC1-215ENST00000567306 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
PDXDC1-215ENST00000567306 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
PDXDC1-215ENST00000567306 DMRT2Q9Y5R5 561 aa11.83□□□□□ -0.52
PDXDC1-215ENST00000567306 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
PDXDC1-215ENST00000567306 DISP1Q96F81 1524 aa11.81□□□□□ -0.52
PDXDC1-215ENST00000567306 PCF11O94913 1555 aaKnown RBP11.8□□□□□ -0.52
PDXDC1-215ENST00000567306 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
PDXDC1-215ENST00000567306 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
PDXDC1-215ENST00000567306 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
PDXDC1-215ENST00000567306 FMN1Q68DA7 1419 aa11.74□□□□□ -0.53
PDXDC1-215ENST00000567306 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
PDXDC1-215ENST00000567306 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
PDXDC1-215ENST00000567306 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.53
PDXDC1-215ENST00000567306 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
PDXDC1-215ENST00000567306 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
PDXDC1-215ENST00000567306 POTEDQ86YR6 584 aa11.71□□□□□ -0.53
PDXDC1-215ENST00000567306 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
PDXDC1-215ENST00000567306 CARMIL2Q6F5E8 1435 aa11.7□□□□□ -0.54
PDXDC1-215ENST00000567306 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
PDXDC1-215ENST00000567306 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
PDXDC1-215ENST00000567306 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
PDXDC1-215ENST00000567306 HECW1Q76N89 1606 aa11.68□□□□□ -0.54
PDXDC1-215ENST00000567306 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
PDXDC1-215ENST00000567306 NPM3O75607 178 aaKnown RBP11.67□□□□□ -0.54
PDXDC1-215ENST00000567306 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
PDXDC1-215ENST00000567306 TTBK1Q5TCY1 1321 aaPredicted RBP11.65□□□□□ -0.54
PDXDC1-215ENST00000567306 PLB1Q6P1J6 1458 aa11.64□□□□□ -0.55
PDXDC1-215ENST00000567306 ABCA8O94911 1581 aa11.64□□□□□ -0.55
PDXDC1-215ENST00000567306 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
PDXDC1-215ENST00000567306 APLP2Q06481 763 aa11.63□□□□□ -0.55
PDXDC1-215ENST00000567306 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
PDXDC1-215ENST00000567306 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
PDXDC1-215ENST00000567306 EPRSP07814 1512 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-215ENST00000567306 CDK13Q14004 1512 aaKnown RBP11.62□□□□□ -0.55
PDXDC1-215ENST00000567306 ATP1B4Q9UN42 357 aaPredicted RBP11.62□□□□□ -0.55
PDXDC1-215ENST00000567306 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
PDXDC1-215ENST00000567306 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
PDXDC1-215ENST00000567306 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
PDXDC1-215ENST00000567306 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
PDXDC1-215ENST00000567306 PTPRGP23470 1445 aa11.6□□□□□ -0.55
PDXDC1-215ENST00000567306 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
PDXDC1-215ENST00000567306 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
PDXDC1-215ENST00000567306 ARID3CA6NKF2 412 aa11.56□□□□□ -0.56
PDXDC1-215ENST00000567306 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
PDXDC1-215ENST00000567306 UACAQ9BZF9 1416 aa11.55□□□□□ -0.56
PDXDC1-215ENST00000567306 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
PDXDC1-215ENST00000567306 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
PDXDC1-215ENST00000567306 HOXD11P31277 338 aaPredicted RBP11.53□□□□□ -0.56
PDXDC1-215ENST00000567306 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
PDXDC1-215ENST00000567306 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.56
PDXDC1-215ENST00000567306 ATP10BO94823 1461 aa11.52□□□□□ -0.56
PDXDC1-215ENST00000567306 ARHGEF11O15085 1522 aa11.52□□□□□ -0.57
PDXDC1-215ENST00000567306 ADCY10Q96PN6 1610 aa11.52□□□□□ -0.57
PDXDC1-215ENST00000567306 PHLDB1Q86UU1 1377 aa11.52□□□□□ -0.57
PDXDC1-215ENST00000567306 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
PDXDC1-215ENST00000567306 NCOA2Q15596 1464 aa11.51□□□□□ -0.57
PDXDC1-215ENST00000567306 RRBP1Q9P2E9 1410 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-215ENST00000567306 KIF14Q15058 1648 aa11.49□□□□□ -0.57
PDXDC1-215ENST00000567306 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
PDXDC1-215ENST00000567306 TROQ12816 1431 aaPredicted RBP11.48□□□□□ -0.57
PDXDC1-215ENST00000567306 RIMBP3CA6NJZ7 1639 aa11.48□□□□□ -0.57
PDXDC1-215ENST00000567306 RIMBP3BA6NNM3 1639 aa11.48□□□□□ -0.57
PDXDC1-215ENST00000567306 RIMBP3Q9UFD9 1639 aa11.48□□□□□ -0.57
PDXDC1-215ENST00000567306 KDM5BQ9UGL1 1544 aa11.47□□□□□ -0.57
PDXDC1-215ENST00000567306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
PDXDC1-215ENST00000567306 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
PDXDC1-215ENST00000567306 MYOM3Q5VTT5 1437 aa11.44□□□□□ -0.58
PDXDC1-215ENST00000567306 CCNB3Q8WWL7 1395 aa11.44□□□□□ -0.58
PDXDC1-215ENST00000567306 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
PDXDC1-215ENST00000567306 CDK11AQ9UQ88 783 aaPredicted RBP11.43□□□□□ -0.58
PDXDC1-215ENST00000567306 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
PDXDC1-215ENST00000567306 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.59
PDXDC1-215ENST00000567306 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms