RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 KIF21BO75037 1637 aa37.08■■■■□ 3.53
E4F1-208ENST00000567111 UBTFP17480 764 aaKnown RBP36.99■■■■□ 3.51
E4F1-208ENST00000567111 ARHGEF11O15085 1522 aa36.99■■■■□ 3.51
E4F1-208ENST00000567111 IQGAP2Q13576 1575 aa36.97■■■■□ 3.51
E4F1-208ENST00000567111 EHMT2Q96KQ7 1210 aa36.97■■■■□ 3.51
E4F1-208ENST00000567111 SHROOM2Q13796 1616 aa36.96■■■■□ 3.51
E4F1-208ENST00000567111 GOLGA3Q08378 1498 aa36.96■■■■□ 3.51
E4F1-208ENST00000567111 PRG4Q92954 1404 aaPredicted RBP36.94■■■■□ 3.5
E4F1-208ENST00000567111 CTTNBP2Q8WZ74 1663 aa36.93■■■■□ 3.5
E4F1-208ENST00000567111 RIMBP3CA6NJZ7 1639 aa36.92■■■■□ 3.5
E4F1-208ENST00000567111 RIMBP3BA6NNM3 1639 aa36.92■■■■□ 3.5
E4F1-208ENST00000567111 RIMBP3Q9UFD9 1639 aa36.92■■■■□ 3.5
E4F1-208ENST00000567111 CARMIL2Q6F5E8 1435 aa36.85■■■■□ 3.49
E4F1-208ENST00000567111 CYB5RLQ6IPT4 315 aa36.79■■■■□ 3.48
E4F1-208ENST00000567111 UGGT2Q9NYU1 1516 aa36.79■■■■□ 3.48
E4F1-208ENST00000567111 ERCC6L2Q5T890 1561 aa36.75■■■■□ 3.47
E4F1-208ENST00000567111 ARAP1Q96P48 1450 aa36.7■■■■□ 3.47
E4F1-208ENST00000567111 RANGAP1P46060 587 aaPredicted RBP36.69■■■■□ 3.46
E4F1-208ENST00000567111 TNIKQ9UKE5 1360 aa36.66■■■■□ 3.46
E4F1-208ENST00000567111 DISP1Q96F81 1524 aa36.65■■■■□ 3.46
E4F1-208ENST00000567111 PTPRGP23470 1445 aa36.61■■■■□ 3.45
E4F1-208ENST00000567111 TTBK1Q5TCY1 1321 aaPredicted RBP36.59■■■■□ 3.45
E4F1-208ENST00000567111 LOC105371045A0A1W2PR82 267 aa36.58■■■■□ 3.45
E4F1-208ENST00000567111 KIAA0556O60303 1618 aa36.57■■■■□ 3.44
E4F1-208ENST00000567111 P3H3Q8IVL6 736 aa36.56■■■■□ 3.44
E4F1-208ENST00000567111 EFCAB5A4FU69 1503 aa36.47■■■■□ 3.43
E4F1-208ENST00000567111 SAMD9Q5K651 1589 aa36.47■■■■□ 3.43
E4F1-208ENST00000567111 NPM1P06748 294 aaKnown RBP eCLIP36.37■■■■□ 3.41
E4F1-208ENST00000567111 CLIP1P30622 1438 aa36.34■■■■□ 3.41
E4F1-208ENST00000567111 FHOD3Q2V2M9 1422 aa36.34■■■■□ 3.41
E4F1-208ENST00000567111 UACAQ9BZF9 1416 aa36.34■■■■□ 3.41
E4F1-208ENST00000567111 ARHGAP35Q9NRY4 1499 aa36.32■■■■□ 3.41
E4F1-208ENST00000567111 UHRF1BP1LA0JNW5 1464 aa36.24■■■■□ 3.39
E4F1-208ENST00000567111 CEP162Q5TB80 1403 aa36.24■■■■□ 3.39
E4F1-208ENST00000567111 PLB1Q6P1J6 1458 aa36.2■■■■□ 3.39
E4F1-208ENST00000567111 FMN1Q68DA7 1419 aa36.2■■■■□ 3.39
E4F1-208ENST00000567111 ADCY10Q96PN6 1610 aa36.19■■■■□ 3.38
E4F1-208ENST00000567111 ABCC2Q92887 1545 aa36.19■■■■□ 3.38
E4F1-208ENST00000567111 ABCA8O94911 1581 aa36.17■■■■□ 3.38
E4F1-208ENST00000567111 RAPGEF6Q8TEU7 1601 aa36.08■■■■□ 3.37
E4F1-208ENST00000567111 ATP1B4Q9UN42 357 aaPredicted RBP36.07■■■■□ 3.36
E4F1-208ENST00000567111 KDM5BQ9UGL1 1544 aa36.05■■■■□ 3.36
E4F1-208ENST00000567111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36■■■■□ 3.35
E4F1-208ENST00000567111 HNRNPUL2Q1KMD3 747 aaKnown RBP36■■■■□ 3.35
E4F1-208ENST00000567111 ARID3CA6NKF2 412 aa35.98■■■■□ 3.35
E4F1-208ENST00000567111 NUP153P49790 1475 aaKnown RBP35.94■■■■□ 3.34
E4F1-208ENST00000567111 TRHP20396 242 aaPredicted RBP35.94■■■■□ 3.34
E4F1-208ENST00000567111 MAPKBP1O60336 1514 aa35.93■■■■□ 3.34
E4F1-208ENST00000567111 ATP10BO94823 1461 aa35.93■■■■□ 3.34
E4F1-208ENST00000567111 ZCCHC11Q5TAX3 1644 aaKnown RBP35.93■■■■□ 3.34
E4F1-208ENST00000567111 CASKIN1Q8WXD9 1431 aa35.92■■■■□ 3.34
E4F1-208ENST00000567111 HECW1Q76N89 1606 aa35.89■■■■□ 3.34
E4F1-208ENST00000567111 ASXL2Q76L83 1435 aa35.88■■■■□ 3.33
E4F1-208ENST00000567111 PLEKHD1A6NEE1 506 aa35.84■■■■□ 3.33
E4F1-208ENST00000567111 CDK11AQ9UQ88 783 aaPredicted RBP35.83■■■■□ 3.33
E4F1-208ENST00000567111 FYCO1Q9BQS8 1478 aa35.83■■■■□ 3.33
E4F1-208ENST00000567111 EPRSP07814 1512 aaKnown RBP35.8■■■■□ 3.32
E4F1-208ENST00000567111 PCF11O94913 1555 aaKnown RBP35.79■■■■□ 3.32
E4F1-208ENST00000567111 VPS8Q8N3P4 1428 aa35.78■■■■□ 3.32
E4F1-208ENST00000567111 FAM69CQ0P6D2 419 aa35.77■■■■□ 3.32
E4F1-208ENST00000567111 ABCC10Q5T3U5 1492 aa35.75■■■■□ 3.31
E4F1-208ENST00000567111 WDR7Q9Y4E6 1490 aa35.75■■■■□ 3.31
E4F1-208ENST00000567111 KCNH8Q96L42 1107 aa35.75■■■■□ 3.31
E4F1-208ENST00000567111 CCDC18Q5T9S5 1454 aa35.74■■■■□ 3.31
E4F1-208ENST00000567111 CDK13Q14004 1512 aaKnown RBP35.72■■■■□ 3.31
E4F1-208ENST00000567111 APLP2Q06481 763 aa35.62■■■■□ 3.29
E4F1-208ENST00000567111 DIP2BQ9P265 1576 aa35.62■■■■□ 3.29
E4F1-208ENST00000567111 LRRIQ1Q96JM4 1722 aa35.6■■■■□ 3.29
E4F1-208ENST00000567111 GLI2P10070 1586 aa35.59■■■■□ 3.29
E4F1-208ENST00000567111 KIF13AQ9H1H9 1805 aa35.57■■■■□ 3.29
E4F1-208ENST00000567111 TROQ12816 1431 aaPredicted RBP35.53■■■■□ 3.28
E4F1-208ENST00000567111 MTUS2Q5JR59 1369 aa35.48■■■■□ 3.27
E4F1-208ENST00000567111 CD109Q6YHK3 1445 aa35.45■■■■□ 3.27
E4F1-208ENST00000567111 MAP3K1Q13233 1512 aa35.43■■■■□ 3.26
E4F1-208ENST00000567111 CFAP43Q8NDM7 1665 aa35.4■■■■□ 3.26
E4F1-208ENST00000567111 TIAM1Q13009 1591 aa35.4■■■■□ 3.26
E4F1-208ENST00000567111 ABCA9Q8IUA7 1624 aa35.39■■■■□ 3.26
E4F1-208ENST00000567111 MAP3K4Q9Y6R4 1608 aa35.39■■■■□ 3.26
E4F1-208ENST00000567111 MAGI3Q5TCQ9 1506 aa35.37■■■■□ 3.25
E4F1-208ENST00000567111 KIF14Q15058 1648 aa35.36■■■■□ 3.25
E4F1-208ENST00000567111 TSPOAP1O95153 1857 aa35.36■■■■□ 3.25
E4F1-208ENST00000567111 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.34■■■■□ 3.25
E4F1-208ENST00000567111 TEX14Q8IWB6 1497 aa35.32■■■■□ 3.24
E4F1-208ENST00000567111 EHBP1L1Q8N3D4 1523 aa35.32■■■■□ 3.24
E4F1-208ENST00000567111 LRRC9Q6ZRR7 1453 aa35.29■■■■□ 3.24
E4F1-208ENST00000567111 KANK4Q5T7N3 995 aaPredicted RBP35.27■■■■□ 3.24
E4F1-208ENST00000567111 TTC37Q6PGP7 1564 aa35.24■■■■□ 3.23
E4F1-208ENST00000567111 PLCH2O75038 1416 aa35.23■■■■□ 3.23
E4F1-208ENST00000567111 EFCAB2Q5VUJ9 269 aa35.21■■■■□ 3.23
E4F1-208ENST00000567111 PHLDB1Q86UU1 1377 aa35.2■■■■□ 3.23
E4F1-208ENST00000567111 CCNB3Q8WWL7 1395 aa35.2■■■■□ 3.23
E4F1-208ENST00000567111 PPRC1Q5VV67 1664 aaKnown RBP35.2■■■■□ 3.23
E4F1-208ENST00000567111 SUPT6HQ7KZ85 1726 aaKnown RBP35.17■■■■□ 3.22
E4F1-208ENST00000567111 MYO5CQ9NQX4 1742 aa35.16■■■■□ 3.22
E4F1-208ENST00000567111 NEO1Q92859 1461 aa35.13■■■■□ 3.21
E4F1-208ENST00000567111 ARAP3Q8WWN8 1544 aa35.12■■■■□ 3.21
E4F1-208ENST00000567111 FANCAO15360 1455 aa35.12■■■■□ 3.21
E4F1-208ENST00000567111 NCOA2Q15596 1464 aa35.12■■■■□ 3.21
E4F1-208ENST00000567111 CFDP1Q9UEE9 299 aaPredicted RBP35.1■■■■□ 3.21
E4F1-208ENST00000567111 GPATCH8Q9UKJ3 1502 aaKnown RBP35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms