RNA–Protein interactions for RNA: ENST00000566727.5

NUP93-213, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-213ENST00000566727 NUP160Q12769 1436 aa12.32□□□□□ -0.44
NUP93-213ENST00000566727 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
NUP93-213ENST00000566727 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
NUP93-213ENST00000566727 FBLN2P98095 1184 aa12.3□□□□□ -0.44
NUP93-213ENST00000566727 CHD1O14646 1710 aa12.3□□□□□ -0.44
NUP93-213ENST00000566727 KIAA0586Q9BVV6 1533 aa12.29□□□□□ -0.44
NUP93-213ENST00000566727 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
NUP93-213ENST00000566727 IQGAP2Q13576 1575 aa12.29□□□□□ -0.44
NUP93-213ENST00000566727 ARAP1Q96P48 1450 aa12.28□□□□□ -0.44
NUP93-213ENST00000566727 EFCAB5A4FU69 1503 aa12.26□□□□□ -0.45
NUP93-213ENST00000566727 UGGT2Q9NYU1 1516 aa12.25□□□□□ -0.45
NUP93-213ENST00000566727 SAMD9Q5K651 1589 aa12.25□□□□□ -0.45
NUP93-213ENST00000566727 VPS8Q8N3P4 1428 aa12.22□□□□□ -0.45
NUP93-213ENST00000566727 CLASP1Q7Z460 1538 aa12.21□□□□□ -0.46
NUP93-213ENST00000566727 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
NUP93-213ENST00000566727 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
NUP93-213ENST00000566727 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
NUP93-213ENST00000566727 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
NUP93-213ENST00000566727 JPH4Q96JJ6 628 aa12.17□□□□□ -0.46
NUP93-213ENST00000566727 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
NUP93-213ENST00000566727 PCF11O94913 1555 aaKnown RBP12.13□□□□□ -0.47
NUP93-213ENST00000566727 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
NUP93-213ENST00000566727 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
NUP93-213ENST00000566727 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
NUP93-213ENST00000566727 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
NUP93-213ENST00000566727 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
NUP93-213ENST00000566727 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
NUP93-213ENST00000566727 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
NUP93-213ENST00000566727 MAP3K1Q13233 1512 aa12.05□□□□□ -0.48
NUP93-213ENST00000566727 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
NUP93-213ENST00000566727 TIAM1Q13009 1591 aa12.04□□□□□ -0.48
NUP93-213ENST00000566727 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 PLB1Q6P1J6 1458 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 ABCA8O94911 1581 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 TTBK1Q5TCY1 1321 aaPredicted RBP12.03□□□□□ -0.48
NUP93-213ENST00000566727 HECW1Q76N89 1606 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 RAPGEF6Q8TEU7 1601 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
NUP93-213ENST00000566727 PTPRGP23470 1445 aa12.02□□□□□ -0.49
NUP93-213ENST00000566727 NUP153P49790 1475 aaKnown RBP12.01□□□□□ -0.49
NUP93-213ENST00000566727 APLP2Q06481 763 aa12□□□□□ -0.49
NUP93-213ENST00000566727 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
NUP93-213ENST00000566727 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
NUP93-213ENST00000566727 CCDC18Q5T9S5 1454 aa11.99□□□□□ -0.49
NUP93-213ENST00000566727 EPRSP07814 1512 aaKnown RBP11.99□□□□□ -0.49
NUP93-213ENST00000566727 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
NUP93-213ENST00000566727 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
NUP93-213ENST00000566727 UACAQ9BZF9 1416 aa11.96□□□□□ -0.49
NUP93-213ENST00000566727 MAGI3Q5TCQ9 1506 aa11.96□□□□□ -0.5
NUP93-213ENST00000566727 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
NUP93-213ENST00000566727 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
NUP93-213ENST00000566727 ARID3CA6NKF2 412 aa11.93□□□□□ -0.5
NUP93-213ENST00000566727 UHRF1BP1LA0JNW5 1464 aa11.93□□□□□ -0.5
NUP93-213ENST00000566727 ATP10BO94823 1461 aa11.93□□□□□ -0.5
NUP93-213ENST00000566727 EHBP1L1Q8N3D4 1523 aa11.92□□□□□ -0.5
NUP93-213ENST00000566727 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
NUP93-213ENST00000566727 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
NUP93-213ENST00000566727 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
NUP93-213ENST00000566727 RIMBP3CA6NJZ7 1639 aa11.89□□□□□ -0.51
NUP93-213ENST00000566727 RIMBP3BA6NNM3 1639 aa11.89□□□□□ -0.51
NUP93-213ENST00000566727 RIMBP3Q9UFD9 1639 aa11.89□□□□□ -0.51
NUP93-213ENST00000566727 KDM5BQ9UGL1 1544 aa11.88□□□□□ -0.51
NUP93-213ENST00000566727 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
NUP93-213ENST00000566727 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
NUP93-213ENST00000566727 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
NUP93-213ENST00000566727 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
NUP93-213ENST00000566727 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
NUP93-213ENST00000566727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
NUP93-213ENST00000566727 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
NUP93-213ENST00000566727 PCGF6Q9BYE7 350 aa11.84□□□□□ -0.51
NUP93-213ENST00000566727 RRBP1Q9P2E9 1410 aaKnown RBP11.84□□□□□ -0.51
NUP93-213ENST00000566727 CDK11AQ9UQ88 783 aaPredicted RBP11.83□□□□□ -0.52
NUP93-213ENST00000566727 KIF14Q15058 1648 aa11.82□□□□□ -0.52
NUP93-213ENST00000566727 PLEKHD1A6NEE1 506 aa11.8□□□□□ -0.52
NUP93-213ENST00000566727 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
NUP93-213ENST00000566727 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
NUP93-213ENST00000566727 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
NUP93-213ENST00000566727 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
NUP93-213ENST00000566727 CYB5RLQ6IPT4 315 aa11.77□□□□□ -0.53
NUP93-213ENST00000566727 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
NUP93-213ENST00000566727 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
NUP93-213ENST00000566727 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
NUP93-213ENST00000566727 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
NUP93-213ENST00000566727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP93-213ENST00000566727 GPATCH8Q9UKJ3 1502 aaKnown RBP11.75□□□□□ -0.53
NUP93-213ENST00000566727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
NUP93-213ENST00000566727 TTC37Q6PGP7 1564 aa11.74□□□□□ -0.53
NUP93-213ENST00000566727 PTPN23Q9H3S7 1636 aa11.74□□□□□ -0.53
NUP93-213ENST00000566727 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
NUP93-213ENST00000566727 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
NUP93-213ENST00000566727 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
NUP93-213ENST00000566727 MAPKBP1O60336 1514 aa11.71□□□□□ -0.53
NUP93-213ENST00000566727 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
NUP93-213ENST00000566727 KCNH8Q96L42 1107 aa11.7□□□□□ -0.54
NUP93-213ENST00000566727 PREX2Q70Z35 1606 aa11.7□□□□□ -0.54
NUP93-213ENST00000566727 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
NUP93-213ENST00000566727 CAMSAP2Q08AD1 1489 aa11.68□□□□□ -0.54
NUP93-213ENST00000566727 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
NUP93-213ENST00000566727 CDC42BPBQ9Y5S2 1711 aa11.67□□□□□ -0.54
NUP93-213ENST00000566727 CFDP1Q9UEE9 299 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms