RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
CPNE2-206ENST00000566042 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
CPNE2-206ENST00000566042 CCNB3Q8WWL7 1395 aa15.25■□□□□ 0.03
CPNE2-206ENST00000566042 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
CPNE2-206ENST00000566042 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
CPNE2-206ENST00000566042 CUL7Q14999 1698 aa15.23■□□□□ 0.03
CPNE2-206ENST00000566042 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
CPNE2-206ENST00000566042 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
CPNE2-206ENST00000566042 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
CPNE2-206ENST00000566042 PHLDB1Q86UU1 1377 aa15.22■□□□□ 0.03
CPNE2-206ENST00000566042 MRC2Q9UBG0 1479 aa15.22■□□□□ 0.03
CPNE2-206ENST00000566042 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
CPNE2-206ENST00000566042 ERCC6Q03468 1493 aa15.21■□□□□ 0.03
CPNE2-206ENST00000566042 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
CPNE2-206ENST00000566042 RRBP1Q9P2E9 1410 aaKnown RBP15.2■□□□□ 0.02
CPNE2-206ENST00000566042 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
CPNE2-206ENST00000566042 DIEXFQ68CQ4 756 aaKnown RBP15.19■□□□□ 0.02
CPNE2-206ENST00000566042 FBLN2P98095 1184 aa15.18■□□□□ 0.02
CPNE2-206ENST00000566042 MYT1Q01538 1121 aa15.18■□□□□ 0.02
CPNE2-206ENST00000566042 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
CPNE2-206ENST00000566042 DHX57Q6P158 1386 aaKnown RBP15.15■□□□□ 0.02
CPNE2-206ENST00000566042 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
CPNE2-206ENST00000566042 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
CPNE2-206ENST00000566042 CASKIN1Q8WXD9 1431 aa15.12■□□□□ 0.01
CPNE2-206ENST00000566042 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
CPNE2-206ENST00000566042 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
CPNE2-206ENST00000566042 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
CPNE2-206ENST00000566042 RAB3GAP2Q9H2M9 1393 aa15.1■□□□□ 0.01
CPNE2-206ENST00000566042 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
CPNE2-206ENST00000566042 PBRM1Q86U86 1689 aa15.08■□□□□ 0.01
CPNE2-206ENST00000566042 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
CPNE2-206ENST00000566042 MAP3K1Q13233 1512 aa15.06■□□□□ 0
CPNE2-206ENST00000566042 IFT140Q96RY7 1462 aa15.06■□□□□ 0
CPNE2-206ENST00000566042 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ 0
CPNE2-206ENST00000566042 CFAP43Q8NDM7 1665 aa15.05■□□□□ 0
CPNE2-206ENST00000566042 ADAMTS12P58397 1594 aa15.04■□□□□ -0
CPNE2-206ENST00000566042 WDR62O43379 1518 aa15.04■□□□□ -0
CPNE2-206ENST00000566042 NEUROD1Q13562 356 aa15.03■□□□□ -0
CPNE2-206ENST00000566042 SAMD9Q5K651 1589 aa15.03■□□□□ -0
CPNE2-206ENST00000566042 IQGAP2Q13576 1575 aa15.01□□□□□ -0.01
CPNE2-206ENST00000566042 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
CPNE2-206ENST00000566042 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
CPNE2-206ENST00000566042 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CPNE2-206ENST00000566042 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
CPNE2-206ENST00000566042 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
CPNE2-206ENST00000566042 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
CPNE2-206ENST00000566042 FGD6Q6ZV73 1430 aa14.98□□□□□ -0.01
CPNE2-206ENST00000566042 CDK13Q14004 1512 aaKnown RBP14.97□□□□□ -0.01
CPNE2-206ENST00000566042 NCOA2Q15596 1464 aa14.97□□□□□ -0.01
CPNE2-206ENST00000566042 MAGI3Q5TCQ9 1506 aa14.95□□□□□ -0.02
CPNE2-206ENST00000566042 GRIN2AQ12879 1464 aa14.94□□□□□ -0.02
CPNE2-206ENST00000566042 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
CPNE2-206ENST00000566042 CLSPNQ9HAW4 1339 aa14.94□□□□□ -0.02
CPNE2-206ENST00000566042 MIER1Q8N108 512 aa14.94□□□□□ -0.02
CPNE2-206ENST00000566042 THOC2Q8NI27 1593 aaKnown RBP14.94□□□□□ -0.02
CPNE2-206ENST00000566042 PTPRKQ15262 1439 aa14.93□□□□□ -0.02
CPNE2-206ENST00000566042 EPRSP07814 1512 aaKnown RBP14.91□□□□□ -0.02
CPNE2-206ENST00000566042 MYOM3Q5VTT5 1437 aa14.91□□□□□ -0.02
CPNE2-206ENST00000566042 KIAA0586Q9BVV6 1533 aa14.9□□□□□ -0.02
CPNE2-206ENST00000566042 MAPKBP1O60336 1514 aa14.9□□□□□ -0.02
CPNE2-206ENST00000566042 DISP1Q96F81 1524 aa14.88□□□□□ -0.03
CPNE2-206ENST00000566042 JPH4Q96JJ6 628 aa14.88□□□□□ -0.03
CPNE2-206ENST00000566042 EHBP1L1Q8N3D4 1523 aa14.87□□□□□ -0.03
CPNE2-206ENST00000566042 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
CPNE2-206ENST00000566042 HIRIP3Q9BW71 556 aaPredicted RBP14.86□□□□□ -0.03
CPNE2-206ENST00000566042 ZNF644Q9H582 1327 aaPredicted RBP14.86□□□□□ -0.03
CPNE2-206ENST00000566042 UGGT2Q9NYU1 1516 aa14.86□□□□□ -0.03
CPNE2-206ENST00000566042 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
CPNE2-206ENST00000566042 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
CPNE2-206ENST00000566042 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
CPNE2-206ENST00000566042 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
CPNE2-206ENST00000566042 KIAA0556O60303 1618 aa14.84□□□□□ -0.03
CPNE2-206ENST00000566042 ZNF777Q9ULD5 760 aaPredicted RBP14.84□□□□□ -0.03
CPNE2-206ENST00000566042 PLB1Q6P1J6 1458 aa14.84□□□□□ -0.03
CPNE2-206ENST00000566042 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
CPNE2-206ENST00000566042 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
CPNE2-206ENST00000566042 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
CPNE2-206ENST00000566042 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
CPNE2-206ENST00000566042 PRG4Q92954 1404 aaPredicted RBP14.8□□□□□ -0.04
CPNE2-206ENST00000566042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
CPNE2-206ENST00000566042 FOXD1Q16676 465 aa14.79□□□□□ -0.04
CPNE2-206ENST00000566042 NAIPQ13075 1403 aa14.79□□□□□ -0.04
CPNE2-206ENST00000566042 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
CPNE2-206ENST00000566042 ACIN1Q9UKV3 1341 aaKnown RBP14.78□□□□□ -0.04
CPNE2-206ENST00000566042 HFM1A2PYH4 1435 aa14.78□□□□□ -0.04
CPNE2-206ENST00000566042 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
CPNE2-206ENST00000566042 CARMIL2Q6F5E8 1435 aa14.75□□□□□ -0.05
CPNE2-206ENST00000566042 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
CPNE2-206ENST00000566042 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
CPNE2-206ENST00000566042 CFDP1Q9UEE9 299 aaPredicted RBP14.74□□□□□ -0.05
CPNE2-206ENST00000566042 NUP160Q12769 1436 aa14.73□□□□□ -0.05
CPNE2-206ENST00000566042 TONSLQ96HA7 1378 aa14.73□□□□□ -0.05
CPNE2-206ENST00000566042 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
CPNE2-206ENST00000566042 UACAQ9BZF9 1416 aa14.71□□□□□ -0.05
CPNE2-206ENST00000566042 DDX10Q13206 875 aaKnown RBP14.69□□□□□ -0.06
CPNE2-206ENST00000566042 KDM6BO15054 1643 aa14.69□□□□□ -0.06
CPNE2-206ENST00000566042 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
CPNE2-206ENST00000566042 PPP1R15AO75807 674 aaPredicted RBP14.69□□□□□ -0.06
CPNE2-206ENST00000566042 TCOF1Q13428 1488 aaKnown RBP14.68□□□□□ -0.06
CPNE2-206ENST00000566042 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms